RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 FAM19A5Q7Z5A7 132 aaPredicted RBP10.62□□□□□ -0.71
CALD1-209ENST00000436461 KRTAP7-1Q8IUC3 87 aa10.62□□□□□ -0.71
CALD1-209ENST00000436461 LINC00474Q9P2X8 69 aa10.62□□□□□ -0.71
CALD1-209ENST00000436461 S100A12P80511 92 aa10.61□□□□□ -0.71
CALD1-209ENST00000436461 SERTAD4-AS1Q5TG53 156 aa10.61□□□□□ -0.71
CALD1-209ENST00000436461 FAT1Q14517 4588 aa10.61□□□□□ -0.71
CALD1-209ENST00000436461 EIF4EBP3O60516 100 aaPredicted RBP10.6□□□□□ -0.71
CALD1-209ENST00000436461 Q8NDZ9 215 aa10.6□□□□□ -0.71
CALD1-209ENST00000436461 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
CALD1-209ENST00000436461 TIMM17BO60830 172 aa10.58□□□□□ -0.72
CALD1-209ENST00000436461 CTAG1AP78358 180 aa10.58□□□□□ -0.72
CALD1-209ENST00000436461 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
CALD1-209ENST00000436461 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
CALD1-209ENST00000436461 TMEM238C9JI98 176 aa10.56□□□□□ -0.72
CALD1-209ENST00000436461 DLEU1O43261 78 aa10.56□□□□□ -0.72
CALD1-209ENST00000436461 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
CALD1-209ENST00000436461 C12orf57Q99622 126 aa10.55□□□□□ -0.72
CALD1-209ENST00000436461 PRO1933Q9H354 126 aa10.55□□□□□ -0.72
CALD1-209ENST00000436461 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
CALD1-209ENST00000436461 C2orf91Q6ZV80 131 aa10.55□□□□□ -0.72
CALD1-209ENST00000436461 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
CALD1-209ENST00000436461 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
CALD1-209ENST00000436461 CDK2AP2O75956 126 aa10.54□□□□□ -0.72
CALD1-209ENST00000436461 PRR3P79522 188 aaKnown RBP10.54□□□□□ -0.72
CALD1-209ENST00000436461 SPANXDQ9BXN6 97 aa10.54□□□□□ -0.72
CALD1-209ENST00000436461 SPANXCQ9NY87 97 aa10.54□□□□□ -0.72
CALD1-209ENST00000436461 M0QXV9 152 aa10.53□□□□□ -0.72
CALD1-209ENST00000436461 VPREB1P12018 145 aa10.53□□□□□ -0.72
CALD1-209ENST00000436461 C22orf24Q9Y442 160 aa10.53□□□□□ -0.72
CALD1-209ENST00000436461 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
CALD1-209ENST00000436461 SRSF9Q13242 221 aaKnown RBP eCLIP10.51□□□□□ -0.734e-6■■■■□ 19.6
CALD1-209ENST00000436461 PLA2G2DQ9UNK4 145 aa10.51□□□□□ -0.73
CALD1-209ENST00000436461 LOC107984156A0A0G2JMH3 177 aa10.51□□□□□ -0.73
CALD1-209ENST00000436461 GAGE10A6NGK3 116 aa10.51□□□□□ -0.73
CALD1-209ENST00000436461 NCR3O14931 201 aa10.51□□□□□ -0.73
CALD1-209ENST00000436461 MUSTN1Q8IVN3 82 aa10.51□□□□□ -0.73
CALD1-209ENST00000436461 ARL17AQ8IVW1 177 aa10.51□□□□□ -0.73
CALD1-209ENST00000436461 SPANXB1Q9NS25 103 aaPredicted RBP10.51□□□□□ -0.73
CALD1-209ENST00000436461 VPS13BQ7Z7G8 4022 aa10.5□□□□□ -0.73
CALD1-209ENST00000436461 NKAPP1Q8N9T2 125 aa10.5□□□□□ -0.73
CALD1-209ENST00000436461 RPL24P83731 157 aaKnown RBP10.49□□□□□ -0.73
CALD1-209ENST00000436461 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
CALD1-209ENST00000436461 LINC00518Q8N0U6 118 aa10.49□□□□□ -0.73
CALD1-209ENST00000436461 KRTAP17-1Q9BYP8 105 aa10.49□□□□□ -0.73
CALD1-209ENST00000436461 UQCR10Q9UDW1 63 aa10.49□□□□□ -0.73
CALD1-209ENST00000436461 MRPL55Q7Z7F7 128 aaKnown RBP10.48□□□□□ -0.73
CALD1-209ENST00000436461 HIST1H4GQ99525 98 aa10.48□□□□□ -0.73
CALD1-209ENST00000436461 IGLV5-37A0A075B6J1 123 aa10.47□□□□□ -0.73
CALD1-209ENST00000436461 HIGD1BQ9P298 99 aa10.47□□□□□ -0.73
CALD1-209ENST00000436461 RPL37AP8A6NKH3 93 aa10.47□□□□□ -0.73
CALD1-209ENST00000436461 Q6ZVH6 145 aa10.47□□□□□ -0.73
CALD1-209ENST00000436461 C7orf33Q8WU49 177 aa10.47□□□□□ -0.73
CALD1-209ENST00000436461 LINC00167Q96N53 147 aa10.47□□□□□ -0.73
CALD1-209ENST00000436461 IFITM1P13164 125 aa10.46□□□□□ -0.74
CALD1-209ENST00000436461 UBE2BP63146 152 aa10.45□□□□□ -0.74
CALD1-209ENST00000436461 LINC00528Q8N1L1 170 aa10.45□□□□□ -0.74
CALD1-209ENST00000436461 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
CALD1-209ENST00000436461 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
CALD1-209ENST00000436461 NDUFC2O95298 119 aa10.44□□□□□ -0.74
CALD1-209ENST00000436461 M0R378 163 aa10.43□□□□□ -0.74
CALD1-209ENST00000436461 HNRNPA3P51991 378 aaKnown RBP10.43□□□□□ -0.74
CALD1-209ENST00000436461 LBHQ53QV2 105 aaPredicted RBP10.42□□□□□ -0.74
CALD1-209ENST00000436461 HERC2O95714 4834 aa10.42□□□□□ -0.74
CALD1-209ENST00000436461 A4D1N5 150 aa10.41□□□□□ -0.74
CALD1-209ENST00000436461 COPS9Q8WXC6 57 aa10.41□□□□□ -0.74
CALD1-209ENST00000436461 TRBV10-3A0A0K0K1G6 114 aa10.4□□□□□ -0.74
CALD1-209ENST00000436461 TSTD3H0UI37 97 aa10.4□□□□□ -0.75
CALD1-209ENST00000436461 LINC00337Q8N6G1 96 aa10.4□□□□□ -0.75
CALD1-209ENST00000436461 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.75
CALD1-209ENST00000436461 IGLV1-50A0A075B6I6 118 aa10.39□□□□□ -0.75
CALD1-209ENST00000436461 TRBV10-2A0A0K0K1G8 114 aa10.39□□□□□ -0.75
CALD1-209ENST00000436461 CEND1Q8N111 149 aa10.39□□□□□ -0.75
CALD1-209ENST00000436461 PPDPFQ9H3Y8 114 aa10.39□□□□□ -0.75
CALD1-209ENST00000436461 DDTP30046 118 aa10.37□□□□□ -0.75
CALD1-209ENST00000436461 FXYD2P54710 66 aa10.37□□□□□ -0.75
CALD1-209ENST00000436461 RPL37AP61513 92 aaKnown RBP10.37□□□□□ -0.75
CALD1-209ENST00000436461 HSD52Q0P140 79 aa10.37□□□□□ -0.75
CALD1-209ENST00000436461 TAL2Q16559 108 aa10.37□□□□□ -0.75
CALD1-209ENST00000436461 S100A7L2Q5SY68 101 aa10.37□□□□□ -0.75
CALD1-209ENST00000436461 Q5VSD8 79 aa10.37□□□□□ -0.75
CALD1-209ENST00000436461 OR13C6PQ8NH95 151 aa10.37□□□□□ -0.75
CALD1-209ENST00000436461 C1orf137Q5JT78 98 aa10.36□□□□□ -0.75
CALD1-209ENST00000436461 Q8N1X5 172 aa10.36□□□□□ -0.75
CALD1-209ENST00000436461 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
CALD1-209ENST00000436461 IGLV6-57P01721 117 aa10.35□□□□□ -0.75
CALD1-209ENST00000436461 A6NDN8 102 aa10.34□□□□□ -0.75
CALD1-209ENST00000436461 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
CALD1-209ENST00000436461 TMEM126AQ9H061 195 aa10.33□□□□□ -0.76
CALD1-209ENST00000436461 CFC1BP0CG36 223 aa10.33□□□□□ -0.76
CALD1-209ENST00000436461 CFC1P0CG37 223 aa10.33□□□□□ -0.76
CALD1-209ENST00000436461 REG3GQ6UW15 175 aa10.32□□□□□ -0.76
CALD1-209ENST00000436461 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
CALD1-209ENST00000436461 KCNQ1DNQ9H478 68 aa10.31□□□□□ -0.76
CALD1-209ENST00000436461 TRAV23DV6A0A075B6W5 121 aa10.3□□□□□ -0.76
CALD1-209ENST00000436461 HINT1P49773 126 aaPredicted RBP10.3□□□□□ -0.76
CALD1-209ENST00000436461 SRRM2Q9UQ35 2752 aaKnown RBP10.3□□□□□ -0.76
CALD1-209ENST00000436461 TRAV13-2A0A0B4J235 113 aa10.29□□□□□ -0.76
CALD1-209ENST00000436461 PRYO14603 147 aa10.29□□□□□ -0.76
CALD1-209ENST00000436461 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
CALD1-209ENST00000436461 BVES-AS1Q5T3Y7 98 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms