RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 TRAV10A0A0B4J240 114 aa10.66□□□□□ -0.7
TVP23C-203ENST00000428082 TGP01266 2768 aa10.66□□□□□ -0.7
TVP23C-203ENST00000428082 KIAA0087Q14695 138 aa10.66□□□□□ -0.7
TVP23C-203ENST00000428082 LINC00643Q86TS7 51 aa10.66□□□□□ -0.7
TVP23C-203ENST00000428082 Q9HAA7 133 aa10.66□□□□□ -0.7
TVP23C-203ENST00000428082 A0A087WYN8 130 aa10.64□□□□□ -0.71
TVP23C-203ENST00000428082 KLK5Q9Y337 293 aaPredicted RBP10.64□□□□□ -0.71
TVP23C-203ENST00000428082 C22orf24Q9Y442 160 aa10.64□□□□□ -0.71
TVP23C-203ENST00000428082 TMEM126AQ9H061 195 aa10.63□□□□□ -0.71
TVP23C-203ENST00000428082 LECT2O14960 151 aa10.62□□□□□ -0.71
TVP23C-203ENST00000428082 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
TVP23C-203ENST00000428082 H3BNG1 76 aa10.61□□□□□ -0.71
TVP23C-203ENST00000428082 ORMDL1Q9P0S3 153 aa10.61□□□□□ -0.71
TVP23C-203ENST00000428082 OBSCN-AS1Q96MR7 158 aa10.6□□□□□ -0.71
TVP23C-203ENST00000428082 DNAH7Q8WXX0 4024 aa10.6□□□□□ -0.71
TVP23C-203ENST00000428082 IGLV10-54A0A075B6I4 117 aa10.6□□□□□ -0.71
TVP23C-203ENST00000428082 GAGE2AQ6NT46 116 aa10.6□□□□□ -0.71
TVP23C-203ENST00000428082 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
TVP23C-203ENST00000428082 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
TVP23C-203ENST00000428082 PRR34Q9NV39 138 aa10.58□□□□□ -0.72
TVP23C-203ENST00000428082 SPAG11BQ08648 103 aa10.58□□□□□ -0.72
TVP23C-203ENST00000428082 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
TVP23C-203ENST00000428082 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
TVP23C-203ENST00000428082 S100A7L2Q5SY68 101 aa10.54□□□□□ -0.72
TVP23C-203ENST00000428082 Q8N3U1 123 aa10.54□□□□□ -0.72
TVP23C-203ENST00000428082 Q8N814 137 aa10.54□□□□□ -0.72
TVP23C-203ENST00000428082 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
TVP23C-203ENST00000428082 DYNC2H1Q8NCM8 4307 aaKnown RBP10.54□□□□□ -0.72
TVP23C-203ENST00000428082 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
TVP23C-203ENST00000428082 LYPD5Q6UWN5 251 aa10.54□□□□□ -0.72
TVP23C-203ENST00000428082 KLK12Q9UKR0 248 aa10.54□□□□□ -0.72
TVP23C-203ENST00000428082 NUPR2A6NF83 97 aa10.53□□□□□ -0.72
TVP23C-203ENST00000428082 C14orf132Q9NPU4 83 aa10.52□□□□□ -0.72
TVP23C-203ENST00000428082 ESRGQ1W209 222 aa10.52□□□□□ -0.73
TVP23C-203ENST00000428082 WWC2-AS2Q96NR7 200 aa10.52□□□□□ -0.73
TVP23C-203ENST00000428082 PRR3P79522 188 aaKnown RBP10.51□□□□□ -0.73
TVP23C-203ENST00000428082 C9orf116Q5BN46 136 aaPredicted RBP10.51□□□□□ -0.73
TVP23C-203ENST00000428082 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
TVP23C-203ENST00000428082 H3BQ85 93 aa10.5□□□□□ -0.73
TVP23C-203ENST00000428082 ENHOQ6UWT2 76 aa10.5□□□□□ -0.73
TVP23C-203ENST00000428082 UNQ6190/PRO20217Q6UXQ8 127 aa10.5□□□□□ -0.73
TVP23C-203ENST00000428082 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
TVP23C-203ENST00000428082 SLPIP03973 132 aa10.5□□□□□ -0.73
TVP23C-203ENST00000428082 NCR3O14931 201 aa10.49□□□□□ -0.73
TVP23C-203ENST00000428082 FAM236AA0A1B0GUQ0 79 aa10.48□□□□□ -0.73
TVP23C-203ENST00000428082 FAM236BA0A1B0GV22 79 aa10.48□□□□□ -0.73
TVP23C-203ENST00000428082 CCKP06307 115 aa10.48□□□□□ -0.73
TVP23C-203ENST00000428082 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
TVP23C-203ENST00000428082 C10orf25Q5T742 122 aa10.48□□□□□ -0.73
TVP23C-203ENST00000428082 C6orf223Q8N319 242 aa10.48□□□□□ -0.73
TVP23C-203ENST00000428082 TENM2Q9NT68 2774 aa10.47□□□□□ -0.73
TVP23C-203ENST00000428082 Q6JHZ5 121 aa10.47□□□□□ -0.73
TVP23C-203ENST00000428082 LINC00575Q6W349 94 aa10.47□□□□□ -0.73
TVP23C-203ENST00000428082 C9orf129Q5T035 196 aaKnown RBP10.46□□□□□ -0.73
TVP23C-203ENST00000428082 PLECQ15149 4684 aaKnown RBP10.46□□□□□ -0.73
TVP23C-203ENST00000428082 CCDC179H3BU77 68 aa10.46□□□□□ -0.74
TVP23C-203ENST00000428082 IGLV6-57P01721 117 aa10.46□□□□□ -0.74
TVP23C-203ENST00000428082 LINC00588Q9Y4M8 146 aa10.46□□□□□ -0.74
TVP23C-203ENST00000428082 B5MCH6 92 aa10.45□□□□□ -0.74
TVP23C-203ENST00000428082 LYSTQ99698 3801 aa10.45□□□□□ -0.74
TVP23C-203ENST00000428082 hADV29S1A0JD25 119 aa10.45□□□□□ -0.74
TVP23C-203ENST00000428082 ZNF561-AS1K7EIQ3 104 aa10.45□□□□□ -0.74
TVP23C-203ENST00000428082 GHRHP01286 108 aa10.45□□□□□ -0.74
TVP23C-203ENST00000428082 WFDC10BQ8IUB3 73 aa10.45□□□□□ -0.74
TVP23C-203ENST00000428082 F8WDY8 70 aa10.43□□□□□ -0.74
TVP23C-203ENST00000428082 LINC00846Q9NV44 126 aa10.43□□□□□ -0.74
TVP23C-203ENST00000428082 C6orf48Q9UBA6 75 aa10.43□□□□□ -0.74
TVP23C-203ENST00000428082 RPL18AQ02543 176 aaKnown RBP10.42□□□□□ -0.74
TVP23C-203ENST00000428082 Q8NDZ9 215 aa10.42□□□□□ -0.74
TVP23C-203ENST00000428082 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
TVP23C-203ENST00000428082 ATP5EP2Q5VTU8 51 aa10.41□□□□□ -0.74
TVP23C-203ENST00000428082 C2orf48Q96LS8 159 aa10.41□□□□□ -0.74
TVP23C-203ENST00000428082 CAMK2N2Q96S95 79 aa10.41□□□□□ -0.74
TVP23C-203ENST00000428082 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
TVP23C-203ENST00000428082 ATOX1O00244 68 aa10.4□□□□□ -0.74
TVP23C-203ENST00000428082 DIRC1Q969H9 104 aa10.4□□□□□ -0.74
TVP23C-203ENST00000428082 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
TVP23C-203ENST00000428082 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
TVP23C-203ENST00000428082 HIST1H4AP62805 103 aaKnown RBP10.39□□□□□ -0.75
TVP23C-203ENST00000428082 UBE2DNLQ8IWF7 75 aa10.39□□□□□ -0.75
TVP23C-203ENST00000428082 UPK3BQ9BT76 320 aa10.39□□□□□ -0.75
TVP23C-203ENST00000428082 C3orf84H3BNL1 204 aa10.38□□□□□ -0.75
TVP23C-203ENST00000428082 PDE6GP18545 87 aa10.38□□□□□ -0.75
TVP23C-203ENST00000428082 RBM3P98179 157 aaKnown RBP10.38□□□□□ -0.75
TVP23C-203ENST00000428082 UQCRQO14949 82 aa10.37□□□□□ -0.75
TVP23C-203ENST00000428082 LOC110117498A0A087WWA1 95 aa10.37□□□□□ -0.75
TVP23C-203ENST00000428082 KRTAP26-1Q6PEX3 210 aa10.37□□□□□ -0.75
TVP23C-203ENST00000428082 C3orf22Q8N5N4 141 aa10.37□□□□□ -0.75
TVP23C-203ENST00000428082 C1orf43Q9BWL3 253 aa10.37□□□□□ -0.75
TVP23C-203ENST00000428082 TRBV10-3A0A0K0K1G6 114 aa10.36□□□□□ -0.75
TVP23C-203ENST00000428082 LINC01556Q5JQF7 62 aa10.36□□□□□ -0.75
TVP23C-203ENST00000428082 SS18L2Q9UHA2 77 aa10.36□□□□□ -0.75
TVP23C-203ENST00000428082 M0R378 163 aa10.35□□□□□ -0.75
TVP23C-203ENST00000428082 DNAH10OSP0CZ25 163 aa10.35□□□□□ -0.75
TVP23C-203ENST00000428082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.35□□□□□ -0.75
TVP23C-203ENST00000428082 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
TVP23C-203ENST00000428082 LAMTOR3Q9UHA4 124 aa10.35□□□□□ -0.75
TVP23C-203ENST00000428082 IGKV3D-7A0A0C4DH55 119 aa10.35□□□□□ -0.75
TVP23C-203ENST00000428082 ZNF73O43830 326 aaPredicted RBP10.35□□□□□ -0.75
TVP23C-203ENST00000428082 COX7BP24311 80 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms