RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 UPK3BQ9BT76 320 aa14.42□□□□□ -0.1
CNEP1R1-202ENST00000427478 C2orf48Q96LS8 159 aa14.41□□□□□ -0.1
CNEP1R1-202ENST00000427478 TRACP01848 142 aa14.39□□□□□ -0.11
CNEP1R1-202ENST00000427478 XAGE1AQ9HD64 81 aa14.39□□□□□ -0.11
CNEP1R1-202ENST00000427478 CBY1Q9Y3M2 126 aa14.39□□□□□ -0.11
CNEP1R1-202ENST00000427478 TMEM126AQ9H061 195 aa14.37□□□□□ -0.11
CNEP1R1-202ENST00000427478 A0A087WYN8 130 aa14.36□□□□□ -0.11
CNEP1R1-202ENST00000427478 H0YGX0 51 aa14.36□□□□□ -0.11
CNEP1R1-202ENST00000427478 TEX49A0A1B0GTD5 131 aa14.35□□□□□ -0.11
CNEP1R1-202ENST00000427478 CASC10Q5T4H9 136 aa14.35□□□□□ -0.11
CNEP1R1-202ENST00000427478 S100A7L2Q5SY68 101 aa14.35□□□□□ -0.11
CNEP1R1-202ENST00000427478 STAB2Q8WWQ8 2551 aa14.33□□□□□ -0.11
CNEP1R1-202ENST00000427478 RPL18AQ02543 176 aaKnown RBP14.33□□□□□ -0.11
CNEP1R1-202ENST00000427478 SYCNQ0VAF6 134 aa14.33□□□□□ -0.12
CNEP1R1-202ENST00000427478 RMI2Q96E14 147 aa14.33□□□□□ -0.12
CNEP1R1-202ENST00000427478 APLNQ9ULZ1 77 aa14.33□□□□□ -0.12
CNEP1R1-202ENST00000427478 NDUFC2-KCTD14E9PQ53 114 aa14.32□□□□□ -0.12
CNEP1R1-202ENST00000427478 F8WDY8 70 aa14.32□□□□□ -0.12
CNEP1R1-202ENST00000427478 USP17L23D6RBM5 183 aa14.3□□□□□ -0.12
CNEP1R1-202ENST00000427478 UBE2DNLQ8IWF7 75 aa14.3□□□□□ -0.12
CNEP1R1-202ENST00000427478 DNAL4O96015 105 aa14.3□□□□□ -0.12
CNEP1R1-202ENST00000427478 GAGE2EQ4V326 116 aa14.3□□□□□ -0.12
CNEP1R1-202ENST00000427478 GAGE2DQ9UEU5 116 aa14.3□□□□□ -0.12
CNEP1R1-202ENST00000427478 DNAH1Q9P2D7 4330 aa14.29□□□□□ -0.12
CNEP1R1-202ENST00000427478 LECT2O14960 151 aa14.29□□□□□ -0.12
CNEP1R1-202ENST00000427478 BAALC-AS2P0C853 105 aa14.29□□□□□ -0.12
CNEP1R1-202ENST00000427478 NHLRC4P0CG21 123 aaPredicted RBP14.29□□□□□ -0.12
CNEP1R1-202ENST00000427478 Q6ZRP5 223 aa14.28□□□□□ -0.12
CNEP1R1-202ENST00000427478 C6orf99Q4VX62 202 aa14.27□□□□□ -0.12
CNEP1R1-202ENST00000427478 KRTAP1-5Q9BYS1 174 aa14.27□□□□□ -0.13
CNEP1R1-202ENST00000427478 IGLV6-57P01721 117 aa14.26□□□□□ -0.13
CNEP1R1-202ENST00000427478 LYSTQ99698 3801 aa14.26□□□□□ -0.13
CNEP1R1-202ENST00000427478 SLPIP03973 132 aa14.24□□□□□ -0.13
CNEP1R1-202ENST00000427478 VPREB1P12018 145 aa14.24□□□□□ -0.13
CNEP1R1-202ENST00000427478 TRBV10-3A0A0K0K1G6 114 aa14.24□□□□□ -0.13
CNEP1R1-202ENST00000427478 C22orf24Q9Y442 160 aa14.24□□□□□ -0.13
CNEP1R1-202ENST00000427478 NUPR2A6NF83 97 aa14.21□□□□□ -0.13
CNEP1R1-202ENST00000427478 CDIP1Q9H305 208 aa14.21□□□□□ -0.13
CNEP1R1-202ENST00000427478 C9orf129Q5T035 196 aaKnown RBP14.2□□□□□ -0.14
CNEP1R1-202ENST00000427478 CSMD3Q7Z407 3707 aa14.19□□□□□ -0.14
CNEP1R1-202ENST00000427478 TRAV23DV6A0A075B6W5 121 aa14.19□□□□□ -0.14
CNEP1R1-202ENST00000427478 DYNC2H1Q8NCM8 4307 aaKnown RBP14.19□□□□□ -0.14
CNEP1R1-202ENST00000427478 Q8N814 137 aa14.18□□□□□ -0.14
CNEP1R1-202ENST00000427478 A0A1B0GX51 115 aa14.17□□□□□ -0.14
CNEP1R1-202ENST00000427478 M0R378 163 aa14.17□□□□□ -0.14
CNEP1R1-202ENST00000427478 TLX1NBP0CAT3 122 aa14.17□□□□□ -0.14
CNEP1R1-202ENST00000427478 ORMDL1Q9P0S3 153 aa14.16□□□□□ -0.14
CNEP1R1-202ENST00000427478 LINC00167Q96N53 147 aa14.15□□□□□ -0.14
CNEP1R1-202ENST00000427478 SIGMAR1Q99720 223 aa14.15□□□□□ -0.14
CNEP1R1-202ENST00000427478 DNHD1Q96M86 4753 aa14.14□□□□□ -0.15
CNEP1R1-202ENST00000427478 LINC00575Q6W349 94 aa14.14□□□□□ -0.15
CNEP1R1-202ENST00000427478 PRKDCP78527 4128 aaKnown RBP14.14□□□□□ -0.15
CNEP1R1-202ENST00000427478 PSCAO43653 123 aa14.14□□□□□ -0.15
CNEP1R1-202ENST00000427478 DIRC1Q969H9 104 aa14.14□□□□□ -0.15
CNEP1R1-202ENST00000427478 SERTAD4-AS1Q5TG53 156 aa14.12□□□□□ -0.15
CNEP1R1-202ENST00000427478 ZNF73O43830 326 aaPredicted RBP14.12□□□□□ -0.15
CNEP1R1-202ENST00000427478 SNCGO76070 127 aa14.11□□□□□ -0.15
CNEP1R1-202ENST00000427478 DNAH7Q8WXX0 4024 aa14.1□□□□□ -0.15
CNEP1R1-202ENST00000427478 NKAPP1Q8N9T2 125 aa14.1□□□□□ -0.15
CNEP1R1-202ENST00000427478 GAGE2BQ13066 116 aa14.09□□□□□ -0.15
CNEP1R1-202ENST00000427478 hADV29S1A0JD25 119 aa14.09□□□□□ -0.15
CNEP1R1-202ENST00000427478 XGP55808 180 aa14.09□□□□□ -0.15
CNEP1R1-202ENST00000427478 PLECQ15149 4684 aaKnown RBP14.08□□□□□ -0.16
CNEP1R1-202ENST00000427478 MEGF8Q7Z7M0 2845 aa14.08□□□□□ -0.16
CNEP1R1-202ENST00000427478 INAFM2P0DMQ5 153 aa14.08□□□□□ -0.16
CNEP1R1-202ENST00000427478 PCP4P48539 62 aa14.08□□□□□ -0.16
CNEP1R1-202ENST00000427478 DNAH10Q8IVF4 4471 aa14.08□□□□□ -0.16
CNEP1R1-202ENST00000427478 FAM168BA1KXE4 195 aa14.06□□□□□ -0.16
CNEP1R1-202ENST00000427478 COX7BP24311 80 aa14.06□□□□□ -0.16
CNEP1R1-202ENST00000427478 NBDYA0A0U1RRE5 68 aa14.06□□□□□ -0.16
CNEP1R1-202ENST00000427478 LOC107984640A0A0U1RRK4 108 aa14.06□□□□□ -0.16
CNEP1R1-202ENST00000427478 A0A1B0GV72 72 aa14.06□□□□□ -0.16
CNEP1R1-202ENST00000427478 FAM240AA0A1B0GVK7 77 aa14.05□□□□□ -0.16
CNEP1R1-202ENST00000427478 MT-ATP8P03928 68 aa14.05□□□□□ -0.16
CNEP1R1-202ENST00000427478 C7orf33Q8WU49 177 aa14.05□□□□□ -0.16
CNEP1R1-202ENST00000427478 PLA2G2DQ9UNK4 145 aa14.05□□□□□ -0.16
CNEP1R1-202ENST00000427478 ELOF1P60002 83 aaKnown RBP14.05□□□□□ -0.16
CNEP1R1-202ENST00000427478 TTC32Q5I0X7 151 aa14.05□□□□□ -0.16
CNEP1R1-202ENST00000427478 C14orf132Q9NPU4 83 aa14.04□□□□□ -0.16
CNEP1R1-202ENST00000427478 TMEM256-PLSCR3K7ERE1 68 aa14.03□□□□□ -0.16
CNEP1R1-202ENST00000427478 OBSCN-AS1Q96MR7 158 aa14.03□□□□□ -0.16
CNEP1R1-202ENST00000427478 STARD9Q9P2P6 4700 aa14.03□□□□□ -0.16
CNEP1R1-202ENST00000427478 TRBV7-6A0A0J9YX20 115 aa14.02□□□□□ -0.16
CNEP1R1-202ENST00000427478 TENM2Q9NT68 2774 aa14.01□□□□□ -0.17
CNEP1R1-202ENST00000427478 IGLV2-33A0A075B6J2 118 aaPredicted RBP14□□□□□ -0.17
CNEP1R1-202ENST00000427478 CNBPP62633 177 aaKnown RBP14□□□□□ -0.17
CNEP1R1-202ENST00000427478 Q6ZQY7 126 aa14□□□□□ -0.17
CNEP1R1-202ENST00000427478 GAGE2AQ6NT46 116 aa14□□□□□ -0.17
CNEP1R1-202ENST00000427478 KRTAP7-1Q8IUC3 87 aa14□□□□□ -0.17
CNEP1R1-202ENST00000427478 IGLV5-37A0A075B6J1 123 aa13.99□□□□□ -0.17
CNEP1R1-202ENST00000427478 FAM19A5Q7Z5A7 132 aaPredicted RBP13.99□□□□□ -0.17
CNEP1R1-202ENST00000427478 KCNQ1DNQ9H478 68 aa13.99□□□□□ -0.17
CNEP1R1-202ENST00000427478 ACYP1P07311 99 aa13.98□□□□□ -0.17
CNEP1R1-202ENST00000427478 RPL37AP8A6NKH3 93 aa13.97□□□□□ -0.17
CNEP1R1-202ENST00000427478 C21orf62-AS1Q17RA5 79 aa13.97□□□□□ -0.17
CNEP1R1-202ENST00000427478 C14orf177Q52M58 125 aa13.97□□□□□ -0.17
CNEP1R1-202ENST00000427478 LINC00528Q8N1L1 170 aa13.97□□□□□ -0.17
CNEP1R1-202ENST00000427478 M0R2N4 97 aa13.96□□□□□ -0.18
CNEP1R1-202ENST00000427478 A0A096LNI7 61 aa13.95□□□□□ -0.18
CNEP1R1-202ENST00000427478 JMJD7-PLA2G4BH0Y9G9 81 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms