RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 Q6ZRU5 148 aa10.13□□□□□ -0.79
PTPN13-203ENST00000427191 ELOF1P60002 83 aaKnown RBP10.13□□□□□ -0.79
PTPN13-203ENST00000427191 KIAA0087Q14695 138 aa10.13□□□□□ -0.79
PTPN13-203ENST00000427191 SMR3AQ99954 134 aa10.13□□□□□ -0.79
PTPN13-203ENST00000427191 IGLV5-45A0A087WSX0 123 aa10.13□□□□□ -0.79
PTPN13-203ENST00000427191 DEFB116Q30KQ4 102 aa10.12□□□□□ -0.79
PTPN13-203ENST00000427191 OXLD1Q5BKU9 147 aa10.12□□□□□ -0.79
PTPN13-203ENST00000427191 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
PTPN13-203ENST00000427191 Q8NBF4 154 aa10.12□□□□□ -0.79
PTPN13-203ENST00000427191 IGF2RP11717 2491 aa10.12□□□□□ -0.79
PTPN13-203ENST00000427191 GOLGB1Q14789 3259 aaKnown RBP10.11□□□□□ -0.79
PTPN13-203ENST00000427191 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
PTPN13-203ENST00000427191 LINC00313P59037 77 aa10.1□□□□□ -0.79
PTPN13-203ENST00000427191 WDR87Q6ZQQ6 2873 aa10.1□□□□□ -0.79
PTPN13-203ENST00000427191 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
PTPN13-203ENST00000427191 PKD1L2Q7Z442 2459 aa10.09□□□□□ -0.79
PTPN13-203ENST00000427191 IGHV3OR16-9A0A0B4J2B5 98 aa10.09□□□□□ -0.79
PTPN13-203ENST00000427191 Q6ZQT0 140 aa10.09□□□□□ -0.79
PTPN13-203ENST00000427191 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
PTPN13-203ENST00000427191 ANKRD17O75179 2603 aaKnown RBP10.08□□□□□ -0.8
PTPN13-203ENST00000427191 USP9XQ93008 2570 aaPredicted RBP10.08□□□□□ -0.8
PTPN13-203ENST00000427191 Q6ZRX8 168 aa10.08□□□□□ -0.8
PTPN13-203ENST00000427191 ACANP16112 2415 aa10.07□□□□□ -0.8
PTPN13-203ENST00000427191 A8MTW9 85 aa10.06□□□□□ -0.8
PTPN13-203ENST00000427191 FAM229AH3BQW9 127 aa10.06□□□□□ -0.8
PTPN13-203ENST00000427191 EDN2P20800 178 aa10.06□□□□□ -0.8
PTPN13-203ENST00000427191 Q6ZSN1 163 aa10.06□□□□□ -0.8
PTPN13-203ENST00000427191 TRBV7-4A0A0J9YYF1 115 aa10.05□□□□□ -0.8
PTPN13-203ENST00000427191 UQCR11O14957 56 aa10.03□□□□□ -0.8
PTPN13-203ENST00000427191 FHL3Q13643 280 aa10.03□□□□□ -0.8
PTPN13-203ENST00000427191 C4orf26Q17RF5 130 aa10.03□□□□□ -0.8
PTPN13-203ENST00000427191 LINC00167Q96N53 147 aa10.02□□□□□ -0.8
PTPN13-203ENST00000427191 Q9UF83 564 aa10.02□□□□□ -0.81
PTPN13-203ENST00000427191 SPACA4Q8TDM5 124 aa10.02□□□□□ -0.81
PTPN13-203ENST00000427191 PLA2G1BP04054 148 aaKnown RBP10.01□□□□□ -0.81
PTPN13-203ENST00000427191 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
PTPN13-203ENST00000427191 CRIPTQ9P021 101 aa10□□□□□ -0.81
PTPN13-203ENST00000427191 AVPP01185 164 aa10□□□□□ -0.81
PTPN13-203ENST00000427191 A8MWP4 228 aa10□□□□□ -0.81
PTPN13-203ENST00000427191 C16orf90A8MZG2 172 aa10□□□□□ -0.81
PTPN13-203ENST00000427191 Q6ZRP5 223 aa10□□□□□ -0.81
PTPN13-203ENST00000427191 FAM19A4Q96LR4 140 aa9.99□□□□□ -0.81
PTPN13-203ENST00000427191 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
PTPN13-203ENST00000427191 PCSK5Q92824 1860 aa9.98□□□□□ -0.81
PTPN13-203ENST00000427191 PRO0461Q9UI25 63 aa9.97□□□□□ -0.81
PTPN13-203ENST00000427191 LINC01600Q96MT4 127 aa9.95□□□□□ -0.82
PTPN13-203ENST00000427191 EP400Q96L91 3159 aa9.95□□□□□ -0.82
PTPN13-203ENST00000427191 KRTAP10-9P60411 292 aa9.95□□□□□ -0.82
PTPN13-203ENST00000427191 SSBP3-AS1Q7Z2R9 100 aa9.94□□□□□ -0.82
PTPN13-203ENST00000427191 ANKRD11Q6UB99 2663 aaPredicted RBP9.94□□□□□ -0.82
PTPN13-203ENST00000427191 TYMSOSQ8TAI1 123 aa9.93□□□□□ -0.82
PTPN13-203ENST00000427191 MDFIQ99750 246 aa9.93□□□□□ -0.82
PTPN13-203ENST00000427191 TM2D3Q9BRN9 247 aa9.93□□□□□ -0.82
PTPN13-203ENST00000427191 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
PTPN13-203ENST00000427191 EPM2AB3EWF7 344 aa9.92□□□□□ -0.82
PTPN13-203ENST00000427191 CD164Q04900 197 aa9.91□□□□□ -0.82
PTPN13-203ENST00000427191 COA5Q86WW8 74 aa9.91□□□□□ -0.82
PTPN13-203ENST00000427191 NCOR2Q9Y618 2525 aa9.91□□□□□ -0.82
PTPN13-203ENST00000427191 FAM218AQ96MZ4 157 aa9.9□□□□□ -0.82
PTPN13-203ENST00000427191 IGLV6-57P01721 117 aa9.9□□□□□ -0.82
PTPN13-203ENST00000427191 CDSNQ15517 529 aa9.9□□□□□ -0.82
PTPN13-203ENST00000427191 USP9YO00507 2555 aaPredicted RBP9.89□□□□□ -0.83
PTPN13-203ENST00000427191 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
PTPN13-203ENST00000427191 LINC00315P59091 139 aa9.88□□□□□ -0.83
PTPN13-203ENST00000427191 KLKP1Q107X0 134 aa9.88□□□□□ -0.83
PTPN13-203ENST00000427191 RPL37AP61513 92 aaKnown RBP9.87□□□□□ -0.83
PTPN13-203ENST00000427191 MIR22HGQ0VDD5 57 aa9.87□□□□□ -0.83
PTPN13-203ENST00000427191 Q96NJ1 140 aa9.86□□□□□ -0.83
PTPN13-203ENST00000427191 ST20-AS1Q8NBB2 130 aa9.84□□□□□ -0.83
PTPN13-203ENST00000427191 IGLV8-61A0A075B6I0 122 aa9.84□□□□□ -0.83
PTPN13-203ENST00000427191 RTL8CO15255 209 aa9.84□□□□□ -0.83
PTPN13-203ENST00000427191 KTN1-AS1Q86SY8 53 aa9.84□□□□□ -0.83
PTPN13-203ENST00000427191 C10orf142B7Z368 130 aa9.82□□□□□ -0.84
PTPN13-203ENST00000427191 NBDYA0A0U1RRE5 68 aa9.81□□□□□ -0.84
PTPN13-203ENST00000427191 DNAH10OSP0CZ25 163 aa9.81□□□□□ -0.84
PTPN13-203ENST00000427191 MTORP42345 2549 aa9.79□□□□□ -0.84
PTPN13-203ENST00000427191 PHF5AQ7RTV0 110 aaKnown RBP9.79□□□□□ -0.84
PTPN13-203ENST00000427191 CHD8Q9HCK8 2581 aa9.78□□□□□ -0.84
PTPN13-203ENST00000427191 KCNQ1DNQ9H478 68 aa9.78□□□□□ -0.84
PTPN13-203ENST00000427191 K7EQZ3 153 aa9.78□□□□□ -0.84
PTPN13-203ENST00000427191 SPANXA2-OT1Q8N9U9 137 aa9.78□□□□□ -0.84
PTPN13-203ENST00000427191 LCA10Q71F78 164 aa9.78□□□□□ -0.84
PTPN13-203ENST00000427191 PRR15Q8IV56 129 aa9.77□□□□□ -0.84
PTPN13-203ENST00000427191 CDC42SE1Q9NRR8 79 aa9.76□□□□□ -0.85
PTPN13-203ENST00000427191 A8MUN3 132 aa9.75□□□□□ -0.85
PTPN13-203ENST00000427191 LUZP6Q538Z0 58 aa9.75□□□□□ -0.85
PTPN13-203ENST00000427191 COL4A2P08572 1712 aa9.74□□□□□ -0.85
PTPN13-203ENST00000427191 A0A1B0GVX0 72 aa9.74□□□□□ -0.85
PTPN13-203ENST00000427191 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
PTPN13-203ENST00000427191 LITAFQ99732 161 aa9.72□□□□□ -0.85
PTPN13-203ENST00000427191 C8orf17Q9NRJ1 99 aa9.71□□□□□ -0.85
PTPN13-203ENST00000427191 SPTBN4Q9H254 2564 aa9.71□□□□□ -0.86
PTPN13-203ENST00000427191 Q8NAQ8 132 aa9.71□□□□□ -0.86
PTPN13-203ENST00000427191 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
PTPN13-203ENST00000427191 IGLV1-50A0A075B6I6 118 aa9.7□□□□□ -0.86
PTPN13-203ENST00000427191 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
PTPN13-203ENST00000427191 KLK9Q2XQG4 91 aa9.69□□□□□ -0.86
PTPN13-203ENST00000427191 CHTF8P0CG12 524 aa9.69□□□□□ -0.86
PTPN13-203ENST00000427191 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
PTPN13-203ENST00000427191 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms