RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 FAM19A5Q7Z5A7 132 aaPredicted RBP8.57□□□□□ -1.04
PRPF39-202ENST00000424478 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
PRPF39-202ENST00000424478 PTTG1IPP53801 180 aa8.56□□□□□ -1.04
PRPF39-202ENST00000424478 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
PRPF39-202ENST00000424478 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
PRPF39-202ENST00000424478 A0A1W2PNN7 141 aa8.55□□□□□ -1.04
PRPF39-202ENST00000424478 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
PRPF39-202ENST00000424478 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
PRPF39-202ENST00000424478 GAGE10A6NGK3 116 aa8.54□□□□□ -1.04
PRPF39-202ENST00000424478 COX17Q14061 63 aa8.54□□□□□ -1.04
PRPF39-202ENST00000424478 NCR3O14931 201 aa8.54□□□□□ -1.04
PRPF39-202ENST00000424478 DDTP30046 118 aa8.54□□□□□ -1.04
PRPF39-202ENST00000424478 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
PRPF39-202ENST00000424478 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
PRPF39-202ENST00000424478 F8WDY8 70 aa8.53□□□□□ -1.04
PRPF39-202ENST00000424478 FXYD2P54710 66 aa8.53□□□□□ -1.04
PRPF39-202ENST00000424478 TLX1NBP0CAT3 122 aa8.53□□□□□ -1.04
PRPF39-202ENST00000424478 BATFQ16520 125 aa8.53□□□□□ -1.04
PRPF39-202ENST00000424478 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.04
PRPF39-202ENST00000424478 TIMM17BO60830 172 aa8.52□□□□□ -1.05
PRPF39-202ENST00000424478 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
PRPF39-202ENST00000424478 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
PRPF39-202ENST00000424478 HIGD1BQ9P298 99 aa8.52□□□□□ -1.05
PRPF39-202ENST00000424478 A0A087WYN8 130 aa8.51□□□□□ -1.05
PRPF39-202ENST00000424478 A4D1N5 150 aa8.51□□□□□ -1.05
PRPF39-202ENST00000424478 SPANXB1Q9NS25 103 aaPredicted RBP8.51□□□□□ -1.05
PRPF39-202ENST00000424478 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
PRPF39-202ENST00000424478 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
PRPF39-202ENST00000424478 SPACA4Q8TDM5 124 aa8.5□□□□□ -1.05
PRPF39-202ENST00000424478 K7ERJ3 54 aa8.5□□□□□ -1.05
PRPF39-202ENST00000424478 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
PRPF39-202ENST00000424478 CEND1Q8N111 149 aa8.49□□□□□ -1.05
PRPF39-202ENST00000424478 KIAA1109Q2LD37 5005 aa8.49□□□□□ -1.05
PRPF39-202ENST00000424478 FAT1Q14517 4588 aa8.49□□□□□ -1.05
PRPF39-202ENST00000424478 IGKV2-28A0A075B6P5 120 aa8.49□□□□□ -1.05
PRPF39-202ENST00000424478 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
PRPF39-202ENST00000424478 IGKV2D-28P01615 120 aa8.49□□□□□ -1.05
PRPF39-202ENST00000424478 VPREB1P12018 145 aa8.48□□□□□ -1.05
PRPF39-202ENST00000424478 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
PRPF39-202ENST00000424478 CIRBP-AS1Q8TBR5 109 aa8.48□□□□□ -1.05
PRPF39-202ENST00000424478 HSD52Q0P140 79 aa8.48□□□□□ -1.05
PRPF39-202ENST00000424478 KRTAP11-1Q8IUC1 163 aa8.48□□□□□ -1.05
PRPF39-202ENST00000424478 H7C2G1 150 aa8.47□□□□□ -1.05
PRPF39-202ENST00000424478 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
PRPF39-202ENST00000424478 NHP2Q9NX24 153 aaKnown RBP8.47□□□□□ -1.05
PRPF39-202ENST00000424478 C22orf24Q9Y442 160 aa8.47□□□□□ -1.05
PRPF39-202ENST00000424478 M0QXV9 152 aa8.46□□□□□ -1.05
PRPF39-202ENST00000424478 BVES-AS1Q5T3Y7 98 aa8.46□□□□□ -1.05
PRPF39-202ENST00000424478 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
PRPF39-202ENST00000424478 SMR3BP02814 79 aaPredicted RBP8.45□□□□□ -1.06
PRPF39-202ENST00000424478 NKAPP1Q8N9T2 125 aa8.45□□□□□ -1.06
PRPF39-202ENST00000424478 C7orf33Q8WU49 177 aa8.45□□□□□ -1.06
PRPF39-202ENST00000424478 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
PRPF39-202ENST00000424478 CFC1P0CG37 223 aa8.44□□□□□ -1.06
PRPF39-202ENST00000424478 A6NDN8 102 aa8.44□□□□□ -1.06
PRPF39-202ENST00000424478 IFITM1P13164 125 aa8.44□□□□□ -1.06
PRPF39-202ENST00000424478 RPL24P83731 157 aaKnown RBP8.44□□□□□ -1.06
PRPF39-202ENST00000424478 Q6ZSA8 131 aa8.44□□□□□ -1.06
PRPF39-202ENST00000424478 Q6ZVH6 145 aa8.43□□□□□ -1.06
PRPF39-202ENST00000424478 RAB37Q96AX2 223 aa8.43□□□□□ -1.06
PRPF39-202ENST00000424478 LINC00167Q96N53 147 aa8.43□□□□□ -1.06
PRPF39-202ENST00000424478 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
PRPF39-202ENST00000424478 XGP55808 180 aa8.43□□□□□ -1.06
PRPF39-202ENST00000424478 NAA38Q9BRA0 125 aaKnown RBP8.43□□□□□ -1.06
PRPF39-202ENST00000424478 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
PRPF39-202ENST00000424478 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
PRPF39-202ENST00000424478 HSPG2P98160 4391 aa8.42□□□□□ -1.06
PRPF39-202ENST00000424478 TAL2Q16559 108 aa8.42□□□□□ -1.06
PRPF39-202ENST00000424478 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
PRPF39-202ENST00000424478 SNHG12Q9BXW3 62 aa8.42□□□□□ -1.06
PRPF39-202ENST00000424478 LINC00474Q9P2X8 69 aa8.41□□□□□ -1.06
PRPF39-202ENST00000424478 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
PRPF39-202ENST00000424478 S100A7L2Q5SY68 101 aa8.4□□□□□ -1.06
PRPF39-202ENST00000424478 UBE2BP63146 152 aa8.4□□□□□ -1.07
PRPF39-202ENST00000424478 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.07
PRPF39-202ENST00000424478 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
PRPF39-202ENST00000424478 NDUFC2O95298 119 aa8.38□□□□□ -1.07
PRPF39-202ENST00000424478 M0R378 163 aa8.38□□□□□ -1.07
PRPF39-202ENST00000424478 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
PRPF39-202ENST00000424478 COPS9Q8WXC6 57 aa8.37□□□□□ -1.07
PRPF39-202ENST00000424478 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
PRPF39-202ENST00000424478 M0R143 59 aa8.36□□□□□ -1.07
PRPF39-202ENST00000424478 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
PRPF39-202ENST00000424478 RYR1P21817 5038 aa8.36□□□□□ -1.07
PRPF39-202ENST00000424478 TMEM238LA0A1B0GVL6 79 aa8.36□□□□□ -1.07
PRPF39-202ENST00000424478 A6NJY4 79 aa8.36□□□□□ -1.07
PRPF39-202ENST00000424478 IGLV5-37A0A075B6J1 123 aa8.35□□□□□ -1.07
PRPF39-202ENST00000424478 Q1RN00 199 aa8.35□□□□□ -1.07
PRPF39-202ENST00000424478 IGLV1-50A0A075B6I6 118 aa8.35□□□□□ -1.07
PRPF39-202ENST00000424478 IGLV6-57P01721 117 aa8.34□□□□□ -1.07
PRPF39-202ENST00000424478 SMIM11BQ8TCY0 68 aa8.34□□□□□ -1.07
PRPF39-202ENST00000424478 PRO1854Q9UHT4 67 aa8.34□□□□□ -1.07
PRPF39-202ENST00000424478 PSORS1C2Q9UIG4 136 aa8.33□□□□□ -1.08
PRPF39-202ENST00000424478 A0A0B4J2C4 111 aa8.33□□□□□ -1.08
PRPF39-202ENST00000424478 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
PRPF39-202ENST00000424478 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
PRPF39-202ENST00000424478 TRAV13-2A0A0B4J235 113 aa8.32□□□□□ -1.08
PRPF39-202ENST00000424478 TSPAN13O95857 204 aa8.32□□□□□ -1.08
PRPF39-202ENST00000424478 C6orf99Q4VX62 202 aa8.32□□□□□ -1.08
PRPF39-202ENST00000424478 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms