RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 KRTAP7-1Q8IUC3 87 aa11.03□□□□□ -0.64
LINC00271-201ENST00000421378 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
LINC00271-201ENST00000421378 HSPG2P98160 4391 aa11.03□□□□□ -0.64
LINC00271-201ENST00000421378 BOD1L2Q8IYS8 172 aa11.03□□□□□ -0.64
LINC00271-201ENST00000421378 C14orf144Q96I85 54 aa11.03□□□□□ -0.64
LINC00271-201ENST00000421378 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
LINC00271-201ENST00000421378 M0QXV9 152 aa11.02□□□□□ -0.65
LINC00271-201ENST00000421378 S100A12P80511 92 aa11.02□□□□□ -0.65
LINC00271-201ENST00000421378 TP73-AS1Q9UF72 201 aa11.02□□□□□ -0.65
LINC00271-201ENST00000421378 SMR3BP02814 79 aaPredicted RBP11.01□□□□□ -0.65
LINC00271-201ENST00000421378 DLEU1O43261 78 aa11□□□□□ -0.65
LINC00271-201ENST00000421378 SMIM6P0DI80 62 aa11□□□□□ -0.65
LINC00271-201ENST00000421378 NPC2P61916 151 aa11□□□□□ -0.65
LINC00271-201ENST00000421378 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
LINC00271-201ENST00000421378 RYR1P21817 5038 aa11□□□□□ -0.65
LINC00271-201ENST00000421378 LOC107984156A0A0G2JMH3 177 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 ARL17AQ8IVW1 177 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 VPREB1P12018 145 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
LINC00271-201ENST00000421378 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
LINC00271-201ENST00000421378 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
LINC00271-201ENST00000421378 SLC25A34Q6PIV7 304 aa10.98□□□□□ -0.65
LINC00271-201ENST00000421378 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
LINC00271-201ENST00000421378 Q8NDZ9 215 aa10.98□□□□□ -0.65
LINC00271-201ENST00000421378 SOSTDC1Q6X4U4 206 aa10.97□□□□□ -0.65
LINC00271-201ENST00000421378 Q6ZVH6 145 aa10.97□□□□□ -0.65
LINC00271-201ENST00000421378 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
LINC00271-201ENST00000421378 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
LINC00271-201ENST00000421378 EIF4EBP3O60516 100 aaPredicted RBP10.96□□□□□ -0.65
LINC00271-201ENST00000421378 LBHQ53QV2 105 aaPredicted RBP10.95□□□□□ -0.66
LINC00271-201ENST00000421378 SPANXB1Q9NS25 103 aaPredicted RBP10.95□□□□□ -0.66
LINC00271-201ENST00000421378 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC00271-201ENST00000421378 COPS9Q8WXC6 57 aa10.94□□□□□ -0.66
LINC00271-201ENST00000421378 UBE2BP63146 152 aa10.94□□□□□ -0.66
LINC00271-201ENST00000421378 FAM229AH3BQW9 127 aa10.93□□□□□ -0.66
LINC00271-201ENST00000421378 NDUFC2O95298 119 aa10.93□□□□□ -0.66
LINC00271-201ENST00000421378 IFITM1P13164 125 aa10.93□□□□□ -0.66
LINC00271-201ENST00000421378 Q8N1X5 172 aa10.93□□□□□ -0.66
LINC00271-201ENST00000421378 GAGE10A6NGK3 116 aa10.92□□□□□ -0.66
LINC00271-201ENST00000421378 NCR3O14931 201 aa10.92□□□□□ -0.66
LINC00271-201ENST00000421378 PRR3P79522 188 aaKnown RBP10.92□□□□□ -0.66
LINC00271-201ENST00000421378 LINC00167Q96N53 147 aa10.92□□□□□ -0.66
LINC00271-201ENST00000421378 Q5VSD8 79 aa10.91□□□□□ -0.66
LINC00271-201ENST00000421378 FAT1Q14517 4588 aa10.91□□□□□ -0.66
LINC00271-201ENST00000421378 M0R378 163 aa10.9□□□□□ -0.66
LINC00271-201ENST00000421378 C2orf91Q6ZV80 131 aa10.9□□□□□ -0.66
LINC00271-201ENST00000421378 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
LINC00271-201ENST00000421378 HIGD1BQ9P298 99 aa10.9□□□□□ -0.66
LINC00271-201ENST00000421378 RPL37AP8A6NKH3 93 aa10.9□□□□□ -0.67
LINC00271-201ENST00000421378 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.67
LINC00271-201ENST00000421378 MUSTN1Q8IVN3 82 aa10.9□□□□□ -0.67
LINC00271-201ENST00000421378 HIST1H4GQ99525 98 aa10.9□□□□□ -0.67
LINC00271-201ENST00000421378 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
LINC00271-201ENST00000421378 KRTAP17-1Q9BYP8 105 aa10.89□□□□□ -0.67
LINC00271-201ENST00000421378 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
LINC00271-201ENST00000421378 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
LINC00271-201ENST00000421378 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
LINC00271-201ENST00000421378 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
LINC00271-201ENST00000421378 PLA2G1BP04054 148 aaKnown RBP10.88□□□□□ -0.67
LINC00271-201ENST00000421378 C12orf57Q99622 126 aa10.87□□□□□ -0.67
LINC00271-201ENST00000421378 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
LINC00271-201ENST00000421378 VPS13BQ7Z7G8 4022 aa10.87□□□□□ -0.67
LINC00271-201ENST00000421378 IGLV1-50A0A075B6I6 118 aa10.86□□□□□ -0.67
LINC00271-201ENST00000421378 TRBV10-3A0A0K0K1G6 114 aa10.84□□□□□ -0.67
LINC00271-201ENST00000421378 C1orf137Q5JT78 98 aa10.84□□□□□ -0.67
LINC00271-201ENST00000421378 S100A7L2Q5SY68 101 aa10.84□□□□□ -0.67
LINC00271-201ENST00000421378 LINC00518Q8N0U6 118 aa10.84□□□□□ -0.67
LINC00271-201ENST00000421378 PRO1933Q9H354 126 aa10.84□□□□□ -0.67
LINC00271-201ENST00000421378 HERC2O95714 4834 aa10.83□□□□□ -0.67
LINC00271-201ENST00000421378 DDTP30046 118 aa10.83□□□□□ -0.68
LINC00271-201ENST00000421378 KRTAP10-4P60372 401 aaPredicted RBP10.82□□□□□ -0.68
LINC00271-201ENST00000421378 A4D1N5 150 aa10.82□□□□□ -0.68
LINC00271-201ENST00000421378 TAL2Q16559 108 aa10.82□□□□□ -0.68
LINC00271-201ENST00000421378 IGLV6-57P01721 117 aa10.81□□□□□ -0.68
LINC00271-201ENST00000421378 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
LINC00271-201ENST00000421378 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
LINC00271-201ENST00000421378 REG3GQ6UW15 175 aa10.8□□□□□ -0.68
LINC00271-201ENST00000421378 OR13C6PQ8NH95 151 aa10.8□□□□□ -0.68
LINC00271-201ENST00000421378 TMEM126AQ9H061 195 aa10.8□□□□□ -0.68
LINC00271-201ENST00000421378 SRRM2Q9UQ35 2752 aaKnown RBP10.79□□□□□ -0.68
LINC00271-201ENST00000421378 KCNQ1DNQ9H478 68 aa10.79□□□□□ -0.68
LINC00271-201ENST00000421378 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
LINC00271-201ENST00000421378 PRYO14603 147 aa10.78□□□□□ -0.68
LINC00271-201ENST00000421378 HSD52Q0P140 79 aa10.78□□□□□ -0.68
LINC00271-201ENST00000421378 CEND1Q8N111 149 aa10.78□□□□□ -0.68
LINC00271-201ENST00000421378 BCE1O60756 84 aa10.77□□□□□ -0.68
LINC00271-201ENST00000421378 KRTAP4-5Q9BYR2 181 aa10.77□□□□□ -0.68
LINC00271-201ENST00000421378 A6NDN8 102 aa10.77□□□□□ -0.69
LINC00271-201ENST00000421378 IGLV7-43P04211 117 aa10.77□□□□□ -0.69
LINC00271-201ENST00000421378 TRAV23DV6A0A075B6W5 121 aa10.76□□□□□ -0.69
LINC00271-201ENST00000421378 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
LINC00271-201ENST00000421378 CBY1Q9Y3M2 126 aa10.76□□□□□ -0.69
LINC00271-201ENST00000421378 TMEM238LA0A1B0GVL6 79 aa10.74□□□□□ -0.69
LINC00271-201ENST00000421378 A6NJY4 79 aa10.74□□□□□ -0.69
LINC00271-201ENST00000421378 SPRR1AP35321 89 aa10.73□□□□□ -0.69
LINC00271-201ENST00000421378 UBE2AP49459 152 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms