RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 NPC2P61916 151 aa13.79□□□□□ -0.2
ABCF3-202ENST00000421340 C9orf129Q5T035 196 aaKnown RBP13.79□□□□□ -0.2
ABCF3-202ENST00000421340 XAGE1AQ9HD64 81 aa13.79□□□□□ -0.2
ABCF3-202ENST00000421340 PLA2G2DQ9UNK4 145 aa13.79□□□□□ -0.2
ABCF3-202ENST00000421340 A0A096LNI7 61 aa13.78□□□□□ -0.2
ABCF3-202ENST00000421340 NDUFC2O95298 119 aa13.78□□□□□ -0.2
ABCF3-202ENST00000421340 FAT2Q9NYQ8 4349 aa13.77□□□□□ -0.2
ABCF3-202ENST00000421340 TMEM238LA0A1B0GVL6 79 aa13.76□□□□□ -0.21
ABCF3-202ENST00000421340 A6NJY4 79 aa13.76□□□□□ -0.21
ABCF3-202ENST00000421340 FUSP35637 526 aaKnown RBP eCLIP13.76□□□□□ -0.21
ABCF3-202ENST00000421340 LINC01620Q4KN68 170 aa13.76□□□□□ -0.21
ABCF3-202ENST00000421340 BVES-AS1Q5T3Y7 98 aa13.76□□□□□ -0.21
ABCF3-202ENST00000421340 A4D1N5 150 aa13.75□□□□□ -0.21
ABCF3-202ENST00000421340 FXYD2P54710 66 aa13.74□□□□□ -0.21
ABCF3-202ENST00000421340 HINT1P49773 126 aaPredicted RBP13.73□□□□□ -0.21
ABCF3-202ENST00000421340 HECTD4Q9Y4D8 3996 aa13.72□□□□□ -0.21
ABCF3-202ENST00000421340 IGKV2-24A0A0C4DH68 120 aa13.72□□□□□ -0.21
ABCF3-202ENST00000421340 DNAH11Q96DT5 4516 aa13.71□□□□□ -0.21
ABCF3-202ENST00000421340 IGLV5-37A0A075B6J1 123 aa13.71□□□□□ -0.21
ABCF3-202ENST00000421340 TRBV10-2A0A0K0K1G8 114 aa13.7□□□□□ -0.22
ABCF3-202ENST00000421340 VPREB1P12018 145 aa13.7□□□□□ -0.22
ABCF3-202ENST00000421340 SPACA4Q8TDM5 124 aa13.7□□□□□ -0.22
ABCF3-202ENST00000421340 Q8NDZ9 215 aa13.69□□□□□ -0.22
ABCF3-202ENST00000421340 A0A1B0GWB2 263 aa13.68□□□□□ -0.22
ABCF3-202ENST00000421340 EPM2AB3EWF7 344 aa13.68□□□□□ -0.22
ABCF3-202ENST00000421340 CHTF8P0CG12 524 aa13.68□□□□□ -0.22
ABCF3-202ENST00000421340 IGKV2-28A0A075B6P5 120 aa13.67□□□□□ -0.22
ABCF3-202ENST00000421340 A0A0B4J2C4 111 aa13.67□□□□□ -0.22
ABCF3-202ENST00000421340 A6NDN8 102 aa13.67□□□□□ -0.22
ABCF3-202ENST00000421340 IGKV2D-28P01615 120 aa13.67□□□□□ -0.22
ABCF3-202ENST00000421340 CFC1BP0CG36 223 aa13.67□□□□□ -0.22
ABCF3-202ENST00000421340 CFC1P0CG37 223 aa13.67□□□□□ -0.22
ABCF3-202ENST00000421340 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.67□□□□□ -0.22
ABCF3-202ENST00000421340 PKD1P98161 4303 aa13.67□□□□□ -0.22
ABCF3-202ENST00000421340 SERTAD4-AS1Q5TG53 156 aa13.66□□□□□ -0.22
ABCF3-202ENST00000421340 TRAV13-2A0A0B4J235 113 aa13.65□□□□□ -0.22
ABCF3-202ENST00000421340 A0A1W2PNN7 141 aa13.65□□□□□ -0.22
ABCF3-202ENST00000421340 FAM168BA1KXE4 195 aa13.65□□□□□ -0.22
ABCF3-202ENST00000421340 PANO1I0J062 215 aa13.65□□□□□ -0.22
ABCF3-202ENST00000421340 M0R378 163 aa13.65□□□□□ -0.22
ABCF3-202ENST00000421340 KRTAP10-1P60331 282 aa13.65□□□□□ -0.22
ABCF3-202ENST00000421340 KRTAP7-1Q8IUC3 87 aa13.65□□□□□ -0.22
ABCF3-202ENST00000421340 RYR3Q15413 4870 aa13.64□□□□□ -0.23
ABCF3-202ENST00000421340 PRR3P79522 188 aaKnown RBP13.64□□□□□ -0.23
ABCF3-202ENST00000421340 Q6ZSA8 131 aa13.64□□□□□ -0.23
ABCF3-202ENST00000421340 NKAPP1Q8N9T2 125 aa13.64□□□□□ -0.23
ABCF3-202ENST00000421340 DPH3Q96FX2 82 aa13.64□□□□□ -0.23
ABCF3-202ENST00000421340 SNHG12Q9BXW3 62 aa13.64□□□□□ -0.23
ABCF3-202ENST00000421340 NHP2Q9NX24 153 aaKnown RBP13.64□□□□□ -0.23
ABCF3-202ENST00000421340 RAB37Q96AX2 223 aa13.63□□□□□ -0.23
ABCF3-202ENST00000421340 C22orf24Q9Y442 160 aa13.63□□□□□ -0.23
ABCF3-202ENST00000421340 PLAC8Q9NZF1 115 aa13.62□□□□□ -0.23
ABCF3-202ENST00000421340 BATFQ16520 125 aa13.61□□□□□ -0.23
ABCF3-202ENST00000421340 FAM19A5Q7Z5A7 132 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-202ENST00000421340 LINC00337Q8N6G1 96 aa13.61□□□□□ -0.23
ABCF3-202ENST00000421340 PRO1854Q9UHT4 67 aa13.61□□□□□ -0.23
ABCF3-202ENST00000421340 A0A087WYN8 130 aa13.6□□□□□ -0.23
ABCF3-202ENST00000421340 NCR3O14931 201 aa13.6□□□□□ -0.23
ABCF3-202ENST00000421340 LBHQ53QV2 105 aaPredicted RBP13.6□□□□□ -0.23
ABCF3-202ENST00000421340 TMEM126AQ9H061 195 aa13.6□□□□□ -0.23
ABCF3-202ENST00000421340 IGLV6-57P01721 117 aa13.58□□□□□ -0.24
ABCF3-202ENST00000421340 MRPL55Q7Z7F7 128 aaKnown RBP13.58□□□□□ -0.24
ABCF3-202ENST00000421340 C7orf33Q8WU49 177 aa13.58□□□□□ -0.24
ABCF3-202ENST00000421340 FAM30AQ9NZY2 134 aa13.58□□□□□ -0.24
ABCF3-202ENST00000421340 DNAH5Q8TE73 4624 aa13.57□□□□□ -0.24
ABCF3-202ENST00000421340 M0QXV9 152 aa13.57□□□□□ -0.24
ABCF3-202ENST00000421340 S100A7L2Q5SY68 101 aa13.57□□□□□ -0.24
ABCF3-202ENST00000421340 CBY1Q9Y3M2 126 aa13.57□□□□□ -0.24
ABCF3-202ENST00000421340 OR13C6PQ8NH95 151 aa13.56□□□□□ -0.24
ABCF3-202ENST00000421340 K7ERJ3 54 aa13.55□□□□□ -0.24
ABCF3-202ENST00000421340 LINC00167Q96N53 147 aa13.55□□□□□ -0.24
ABCF3-202ENST00000421340 RPL13AP40429 203 aaKnown RBP13.54□□□□□ -0.24
ABCF3-202ENST00000421340 COL5A1-AS1Q5SY13 56 aa13.54□□□□□ -0.24
ABCF3-202ENST00000421340 IGLV1-50A0A075B6I6 118 aa13.53□□□□□ -0.24
ABCF3-202ENST00000421340 TRBV10-3A0A0K0K1G6 114 aa13.53□□□□□ -0.24
ABCF3-202ENST00000421340 CIRBP-AS1Q8TBR5 109 aa13.51□□□□□ -0.25
ABCF3-202ENST00000421340 KCNQ1DNQ9H478 68 aa13.51□□□□□ -0.25
ABCF3-202ENST00000421340 GAGE10A6NGK3 116 aa13.5□□□□□ -0.25
ABCF3-202ENST00000421340 PHF5AQ7RTV0 110 aaKnown RBP13.5□□□□□ -0.25
ABCF3-202ENST00000421340 DNAH8Q96JB1 4490 aa13.49□□□□□ -0.25
ABCF3-202ENST00000421340 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
ABCF3-202ENST00000421340 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
ABCF3-202ENST00000421340 TSPAN13O95857 204 aa13.47□□□□□ -0.25
ABCF3-202ENST00000421340 SMIM11BQ8TCY0 68 aa13.47□□□□□ -0.25
ABCF3-202ENST00000421340 TRAV23DV6A0A075B6W5 121 aa13.46□□□□□ -0.25
ABCF3-202ENST00000421340 RPL37AP8A6NKH3 93 aa13.46□□□□□ -0.25
ABCF3-202ENST00000421340 PRYO14603 147 aa13.46□□□□□ -0.25
ABCF3-202ENST00000421340 TAX1BP3O14907 124 aa13.46□□□□□ -0.25
ABCF3-202ENST00000421340 H7C2G1 150 aa13.45□□□□□ -0.26
ABCF3-202ENST00000421340 UBE2BP63146 152 aa13.45□□□□□ -0.26
ABCF3-202ENST00000421340 Q1RN00 199 aa13.45□□□□□ -0.26
ABCF3-202ENST00000421340 C9orf118A6NHY6 69 aa13.43□□□□□ -0.26
ABCF3-202ENST00000421340 TRBV7-6A0A0J9YX20 115 aa13.42□□□□□ -0.26
ABCF3-202ENST00000421340 ZNF73O43830 326 aaPredicted RBP13.42□□□□□ -0.26
ABCF3-202ENST00000421340 SPRR1AP35321 89 aa13.42□□□□□ -0.26
ABCF3-202ENST00000421340 XGP55808 180 aa13.41□□□□□ -0.26
ABCF3-202ENST00000421340 DYNC1H1Q14204 4646 aaKnown RBP13.41□□□□□ -0.26
ABCF3-202ENST00000421340 REG3GQ6UW15 175 aa13.4□□□□□ -0.26
ABCF3-202ENST00000421340 PSMB2P49721 201 aa13.39□□□□□ -0.27
ABCF3-202ENST00000421340 C6orf99Q4VX62 202 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms