RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 ATP6V1G1O75348 118 aa12.57□□□□□ -0.4
PTPN4-202ENST00000420482 IFI27L1Q96BM0 104 aa12.57□□□□□ -0.4
PTPN4-202ENST00000420482 IGKV2D-26A0A0A0MRZ7 120 aa12.55□□□□□ -0.4
PTPN4-202ENST00000420482 PRLHP81277 87 aa12.55□□□□□ -0.4
PTPN4-202ENST00000420482 TMEM223A0PJW6 202 aa12.54□□□□□ -0.4
PTPN4-202ENST00000420482 ANAPC11Q9NYG5 84 aa12.54□□□□□ -0.4
PTPN4-202ENST00000420482 TMEM238C9JI98 176 aa12.53□□□□□ -0.4
PTPN4-202ENST00000420482 HSBP1O75506 76 aa12.53□□□□□ -0.4
PTPN4-202ENST00000420482 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
PTPN4-202ENST00000420482 M0R378 163 aa12.52□□□□□ -0.41
PTPN4-202ENST00000420482 CBLN2Q8IUK8 224 aa12.51□□□□□ -0.41
PTPN4-202ENST00000420482 HERV-K104P63124 156 aa12.5□□□□□ -0.41
PTPN4-202ENST00000420482 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
PTPN4-202ENST00000420482 LINC00304Q8N9R0 145 aa12.5□□□□□ -0.41
PTPN4-202ENST00000420482 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
PTPN4-202ENST00000420482 KRTAP13-2Q52LG2 175 aa12.49□□□□□ -0.41
PTPN4-202ENST00000420482 YPEL4Q96NS1 127 aa12.49□□□□□ -0.41
PTPN4-202ENST00000420482 CTAG1AP78358 180 aa12.48□□□□□ -0.41
PTPN4-202ENST00000420482 HIGD2AQ9BW72 106 aa12.47□□□□□ -0.41
PTPN4-202ENST00000420482 MAP1LC3CQ9BXW4 147 aa12.47□□□□□ -0.41
PTPN4-202ENST00000420482 SMIM13P0DJ93 91 aa12.46□□□□□ -0.41
PTPN4-202ENST00000420482 Q8NDZ9 215 aa12.46□□□□□ -0.41
PTPN4-202ENST00000420482 PLEKHB2Q96CS7 222 aa12.46□□□□□ -0.41
PTPN4-202ENST00000420482 MYMXA0A1B0GTQ4 84 aa12.45□□□□□ -0.42
PTPN4-202ENST00000420482 S100A12P80511 92 aa12.45□□□□□ -0.42
PTPN4-202ENST00000420482 BOD1L2Q8IYS8 172 aa12.45□□□□□ -0.42
PTPN4-202ENST00000420482 ZNF706Q9Y5V0 76 aaPredicted RBP12.45□□□□□ -0.42
PTPN4-202ENST00000420482 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
PTPN4-202ENST00000420482 NDUFA12Q9UI09 145 aa12.44□□□□□ -0.42
PTPN4-202ENST00000420482 H0Y8G0 127 aa12.43□□□□□ -0.42
PTPN4-202ENST00000420482 PRYO14603 147 aa12.43□□□□□ -0.42
PTPN4-202ENST00000420482 MIR7-3HGQ8N6C7 128 aa12.43□□□□□ -0.42
PTPN4-202ENST00000420482 LEPROTL1O95214 131 aa12.42□□□□□ -0.42
PTPN4-202ENST00000420482 MUC2Q02817 5179 aa12.42□□□□□ -0.42
PTPN4-202ENST00000420482 A0A0U1RQV1 116 aa12.4□□□□□ -0.42
PTPN4-202ENST00000420482 TRGC2P03986 189 aa12.4□□□□□ -0.42
PTPN4-202ENST00000420482 PLNP26678 52 aa12.4□□□□□ -0.42
PTPN4-202ENST00000420482 NCR3O14931 201 aa12.39□□□□□ -0.43
PTPN4-202ENST00000420482 SPAG11AQ6PDA7 123 aa12.38□□□□□ -0.43
PTPN4-202ENST00000420482 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
PTPN4-202ENST00000420482 HSPB8Q9UJY1 196 aa12.38□□□□□ -0.43
PTPN4-202ENST00000420482 ETDCA0A1B0GVM5 59 aa12.37□□□□□ -0.43
PTPN4-202ENST00000420482 LEPROTO15243 131 aa12.37□□□□□ -0.43
PTPN4-202ENST00000420482 HERVK_113P61574 105 aa12.37□□□□□ -0.43
PTPN4-202ENST00000420482 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
PTPN4-202ENST00000420482 KCNQ1DNQ9H478 68 aa12.37□□□□□ -0.43
PTPN4-202ENST00000420482 C4orf48Q5BLP8 95 aa12.36□□□□□ -0.43
PTPN4-202ENST00000420482 RETNLBQ9BQ08 111 aa12.36□□□□□ -0.43
PTPN4-202ENST00000420482 SERF1AO75920 110 aa12.35□□□□□ -0.43
PTPN4-202ENST00000420482 C3orf22Q8N5N4 141 aa12.34□□□□□ -0.43
PTPN4-202ENST00000420482 MIEN1Q9BRT3 115 aa12.34□□□□□ -0.43
PTPN4-202ENST00000420482 DPM2O94777 84 aa12.33□□□□□ -0.44
PTPN4-202ENST00000420482 SPRR1AP35321 89 aa12.33□□□□□ -0.44
PTPN4-202ENST00000420482 NMUP48645 174 aa12.33□□□□□ -0.44
PTPN4-202ENST00000420482 CDIP1Q9H305 208 aa12.32□□□□□ -0.44
PTPN4-202ENST00000420482 IGLV7-46A0A075B6I9 117 aa12.31□□□□□ -0.44
PTPN4-202ENST00000420482 TRBV10-3A0A0K0K1G6 114 aa12.31□□□□□ -0.44
PTPN4-202ENST00000420482 J3QQQ9 107 aa12.31□□□□□ -0.44
PTPN4-202ENST00000420482 LGALS3P17931 250 aaKnown RBP12.31□□□□□ -0.44
PTPN4-202ENST00000420482 TPRXLQ17RH7 258 aa12.31□□□□□ -0.44
PTPN4-202ENST00000420482 FABP4P15090 132 aa12.3□□□□□ -0.44
PTPN4-202ENST00000420482 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
PTPN4-202ENST00000420482 LOC107984156A0A0G2JMH3 177 aa12.29□□□□□ -0.44
PTPN4-202ENST00000420482 TRBV10-2A0A0K0K1G8 114 aa12.29□□□□□ -0.44
PTPN4-202ENST00000420482 IGKCP01834 107 aa12.29□□□□□ -0.44
PTPN4-202ENST00000420482 ARL17AQ8IVW1 177 aa12.29□□□□□ -0.44
PTPN4-202ENST00000420482 DDTP30046 118 aa12.28□□□□□ -0.44
PTPN4-202ENST00000420482 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
PTPN4-202ENST00000420482 KRTAP4-16G5E9R7 235 aaPredicted RBP12.27□□□□□ -0.45
PTPN4-202ENST00000420482 LINC00310P59036 64 aa12.27□□□□□ -0.45
PTPN4-202ENST00000420482 DAND5Q8N907 189 aa12.27□□□□□ -0.45
PTPN4-202ENST00000420482 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.45
PTPN4-202ENST00000420482 S100A7L2Q5SY68 101 aa12.25□□□□□ -0.45
PTPN4-202ENST00000420482 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
PTPN4-202ENST00000420482 NDUFC2O95298 119 aa12.24□□□□□ -0.45
PTPN4-202ENST00000420482 FP248Q71RG6 208 aaPredicted RBP12.24□□□□□ -0.45
PTPN4-202ENST00000420482 Q8NBF4 154 aa12.24□□□□□ -0.45
PTPN4-202ENST00000420482 B5MCH6 92 aa12.23□□□□□ -0.45
PTPN4-202ENST00000420482 PMCHL2Q9BQD1 86 aa12.23□□□□□ -0.45
PTPN4-202ENST00000420482 SPINK1P00995 79 aa12.22□□□□□ -0.45
PTPN4-202ENST00000420482 LINC00483Q53H64 154 aa12.22□□□□□ -0.45
PTPN4-202ENST00000420482 GAGE2AQ6NT46 116 aa12.22□□□□□ -0.45
PTPN4-202ENST00000420482 KRTAP9-2Q9BYQ4 174 aa12.22□□□□□ -0.45
PTPN4-202ENST00000420482 JOSD1Q15040 202 aaPredicted RBP12.21□□□□□ -0.45
PTPN4-202ENST00000420482 CBY1Q9Y3M2 126 aa12.21□□□□□ -0.45
PTPN4-202ENST00000420482 COLCA2A8K830 154 aa12.2□□□□□ -0.46
PTPN4-202ENST00000420482 Q6ZRX8 168 aa12.19□□□□□ -0.46
PTPN4-202ENST00000420482 SLC7A5P1Q8MH63 180 aa12.19□□□□□ -0.46
PTPN4-202ENST00000420482 TRAV23DV6A0A075B6W5 121 aa12.17□□□□□ -0.46
PTPN4-202ENST00000420482 E9PLD3 99 aa12.17□□□□□ -0.46
PTPN4-202ENST00000420482 IGLV6-57P01721 117 aa12.17□□□□□ -0.46
PTPN4-202ENST00000420482 LCE2AQ5TA79 106 aaPredicted RBP12.17□□□□□ -0.46
PTPN4-202ENST00000420482 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
PTPN4-202ENST00000420482 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
PTPN4-202ENST00000420482 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
PTPN4-202ENST00000420482 SSBP3-AS1Q7Z2R9 100 aa12.16□□□□□ -0.46
PTPN4-202ENST00000420482 FAT4Q6V0I7 4981 aa12.15□□□□□ -0.46
PTPN4-202ENST00000420482 MOBPQ13875 183 aa12.14□□□□□ -0.47
PTPN4-202ENST00000420482 Q9BRP9 147 aa12.14□□□□□ -0.47
PTPN4-202ENST00000420482 ERC2-IT1O76042 136 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms