RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 Q6ZVQ6 151 aa11.92□□□□□ -0.5
SDCBP-202ENST00000413219 CYSRT1A8MQ03 144 aa11.91□□□□□ -0.5
SDCBP-202ENST00000413219 CXCL6P80162 114 aa11.91□□□□□ -0.5
SDCBP-202ENST00000413219 C20orf197Q8N268 126 aa11.91□□□□□ -0.5
SDCBP-202ENST00000413219 DAD1P61803 113 aa11.9□□□□□ -0.5
SDCBP-202ENST00000413219 Q6ZQY7 126 aa11.9□□□□□ -0.5
SDCBP-202ENST00000413219 NF1P21359 2839 aa11.9□□□□□ -0.5
SDCBP-202ENST00000413219 NIPBLQ6KC79 2804 aaeCLIP11.9□□□□□ -0.5
SDCBP-202ENST00000413219 LELP1Q5T871 98 aa11.9□□□□□ -0.51
SDCBP-202ENST00000413219 PRR34Q9NV39 138 aa11.89□□□□□ -0.51
SDCBP-202ENST00000413219 M0R2N4 97 aa11.88□□□□□ -0.51
SDCBP-202ENST00000413219 DIRC1Q969H9 104 aa11.88□□□□□ -0.51
SDCBP-202ENST00000413219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.88□□□□□ -0.51
SDCBP-202ENST00000413219 HAMPP81172 84 aa11.87□□□□□ -0.51
SDCBP-202ENST00000413219 APCP25054 2843 aa11.87□□□□□ -0.51
SDCBP-202ENST00000413219 TRBV7-6A0A0J9YX20 115 aa11.86□□□□□ -0.51
SDCBP-202ENST00000413219 KRTAP10-3P60369 221 aa11.86□□□□□ -0.51
SDCBP-202ENST00000413219 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
SDCBP-202ENST00000413219 TRBV7-4A0A0J9YYF1 115 aa11.85□□□□□ -0.51
SDCBP-202ENST00000413219 FAM236DA0A1B0GTK5 79 aa11.85□□□□□ -0.51
SDCBP-202ENST00000413219 FAM236CP0DP71 79 aa11.85□□□□□ -0.51
SDCBP-202ENST00000413219 APOC4P55056 127 aa11.85□□□□□ -0.51
SDCBP-202ENST00000413219 KLKP1Q107X0 134 aa11.85□□□□□ -0.51
SDCBP-202ENST00000413219 DEFB135Q30KP9 77 aa11.85□□□□□ -0.51
SDCBP-202ENST00000413219 DEFB4AO15263 64 aa11.84□□□□□ -0.51
SDCBP-202ENST00000413219 SPATA3Q8NHX4 192 aa11.84□□□□□ -0.51
SDCBP-202ENST00000413219 H7BZZ5 65 aa11.83□□□□□ -0.51
SDCBP-202ENST00000413219 COX7BP24311 80 aa11.83□□□□□ -0.52
SDCBP-202ENST00000413219 Q5XG85 94 aa11.83□□□□□ -0.52
SDCBP-202ENST00000413219 C6orf48Q9UBA6 75 aa11.83□□□□□ -0.52
SDCBP-202ENST00000413219 EPM2AB3EWF7 344 aa11.82□□□□□ -0.52
SDCBP-202ENST00000413219 ZNF73O43830 326 aaPredicted RBP11.82□□□□□ -0.52
SDCBP-202ENST00000413219 ELOF1P60002 83 aaKnown RBP11.82□□□□□ -0.52
SDCBP-202ENST00000413219 KLK12Q9UKR0 248 aa11.82□□□□□ -0.52
SDCBP-202ENST00000413219 MIFP14174 115 aa11.82□□□□□ -0.52
SDCBP-202ENST00000413219 FLNAP21333 2647 aaKnown RBP11.81□□□□□ -0.52
SDCBP-202ENST00000413219 Q8NAQ8 132 aa11.81□□□□□ -0.52
SDCBP-202ENST00000413219 CELA1Q9UNI1 258 aa11.81□□□□□ -0.52
SDCBP-202ENST00000413219 SETD2Q9BYW2 2564 aaPredicted RBP11.81□□□□□ -0.52
SDCBP-202ENST00000413219 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
SDCBP-202ENST00000413219 WIPF1O43516 503 aa11.8□□□□□ -0.52
SDCBP-202ENST00000413219 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
SDCBP-202ENST00000413219 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
SDCBP-202ENST00000413219 ZFYVE26Q68DK2 2539 aa11.79□□□□□ -0.52
SDCBP-202ENST00000413219 SPART-AS1P0CW21 52 aa11.79□□□□□ -0.52
SDCBP-202ENST00000413219 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
SDCBP-202ENST00000413219 XAGE1AQ9HD64 81 aa11.78□□□□□ -0.52
SDCBP-202ENST00000413219 CCDC168Q8NDH2 2452 aa11.78□□□□□ -0.52
SDCBP-202ENST00000413219 ANK3Q12955 4377 aaKnown RBP11.77□□□□□ -0.52
SDCBP-202ENST00000413219 C4orf26Q17RF5 130 aa11.77□□□□□ -0.52
SDCBP-202ENST00000413219 VPREB1P12018 145 aa11.76□□□□□ -0.53
SDCBP-202ENST00000413219 M0R378 163 aa11.75□□□□□ -0.53
SDCBP-202ENST00000413219 NDUFC1O43677 76 aa11.74□□□□□ -0.53
SDCBP-202ENST00000413219 HTN3P15516 51 aa11.74□□□□□ -0.53
SDCBP-202ENST00000413219 EGFEM1PQ0D2K5 195 aa11.74□□□□□ -0.53
SDCBP-202ENST00000413219 CUBNO60494 3623 aa11.74□□□□□ -0.53
SDCBP-202ENST00000413219 GCN1Q92616 2671 aaKnown RBP11.73□□□□□ -0.53
SDCBP-202ENST00000413219 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
SDCBP-202ENST00000413219 CAMK2N2Q96S95 79 aa11.72□□□□□ -0.53
SDCBP-202ENST00000413219 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
SDCBP-202ENST00000413219 RMI2Q96E14 147 aa11.71□□□□□ -0.54
SDCBP-202ENST00000413219 SNURFQ9Y675 71 aa11.71□□□□□ -0.54
SDCBP-202ENST00000413219 ERC2-IT1O76042 136 aa11.69□□□□□ -0.54
SDCBP-202ENST00000413219 SCXQ7RTU7 201 aa11.69□□□□□ -0.54
SDCBP-202ENST00000413219 F8WEM9 126 aa11.69□□□□□ -0.54
SDCBP-202ENST00000413219 ATP5EP56381 51 aaPredicted RBP11.69□□□□□ -0.54
SDCBP-202ENST00000413219 TM2D3Q9BRN9 247 aa11.69□□□□□ -0.54
SDCBP-202ENST00000413219 KRTAP26-1Q6PEX3 210 aa11.68□□□□□ -0.54
SDCBP-202ENST00000413219 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
SDCBP-202ENST00000413219 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
SDCBP-202ENST00000413219 NREPQ16612 68 aa11.66□□□□□ -0.54
SDCBP-202ENST00000413219 MTORP42345 2549 aa11.66□□□□□ -0.54
SDCBP-202ENST00000413219 Q6ZRU5 148 aa11.66□□□□□ -0.54
SDCBP-202ENST00000413219 BPY2O14599 106 aa11.65□□□□□ -0.54
SDCBP-202ENST00000413219 PDZD2O15018 2839 aa11.64□□□□□ -0.55
SDCBP-202ENST00000413219 F8WDY8 70 aa11.64□□□□□ -0.55
SDCBP-202ENST00000413219 H3BNG1 76 aa11.64□□□□□ -0.55
SDCBP-202ENST00000413219 SMIM26A0A096LP01 95 aa11.64□□□□□ -0.55
SDCBP-202ENST00000413219 ACANP16112 2415 aa11.63□□□□□ -0.55
SDCBP-202ENST00000413219 C15orf56Q8N910 161 aa11.63□□□□□ -0.55
SDCBP-202ENST00000413219 IGKV4-1P06312 121 aa11.62□□□□□ -0.55
SDCBP-202ENST00000413219 WFDC10BQ8IUB3 73 aa11.62□□□□□ -0.55
SDCBP-202ENST00000413219 TMEM254Q8TBM7 123 aa11.61□□□□□ -0.55
SDCBP-202ENST00000413219 SMR3AQ99954 134 aa11.58□□□□□ -0.56
SDCBP-202ENST00000413219 KCNQ1DNQ9H478 68 aa11.58□□□□□ -0.56
SDCBP-202ENST00000413219 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-202ENST00000413219 A0A1B0GW54 56 aa11.57□□□□□ -0.56
SDCBP-202ENST00000413219 Q6ZRP5 223 aa11.57□□□□□ -0.56
SDCBP-202ENST00000413219 OCR1Q9BZK8 76 aa11.57□□□□□ -0.56
SDCBP-202ENST00000413219 MRAPQ8TCY5 172 aa11.56□□□□□ -0.56
SDCBP-202ENST00000413219 IGLV5-48A0A075B6I7 105 aa11.55□□□□□ -0.56
SDCBP-202ENST00000413219 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
SDCBP-202ENST00000413219 Q8N9L7 120 aa11.55□□□□□ -0.56
SDCBP-202ENST00000413219 C1orf43Q9BWL3 253 aa11.55□□□□□ -0.56
SDCBP-202ENST00000413219 A0A0U1RQV1 116 aa11.54□□□□□ -0.56
SDCBP-202ENST00000413219 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
SDCBP-202ENST00000413219 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
SDCBP-202ENST00000413219 Q8N377 158 aa11.53□□□□□ -0.56
SDCBP-202ENST00000413219 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
SDCBP-202ENST00000413219 PRYO14603 147 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms