RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 URB1-AS1Q96HZ7 61 aa12.75□□□□□ -0.37
CROT-202ENST00000412227 M0R378 163 aa12.73□□□□□ -0.37
CROT-202ENST00000412227 LINC00614P0C842 121 aa12.73□□□□□ -0.37
CROT-202ENST00000412227 HBDP02042 147 aa12.72□□□□□ -0.37
CROT-202ENST00000412227 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
CROT-202ENST00000412227 TMEM170BQ5T4T1 132 aa12.71□□□□□ -0.37
CROT-202ENST00000412227 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
CROT-202ENST00000412227 PLEKHB2Q96CS7 222 aa12.71□□□□□ -0.37
CROT-202ENST00000412227 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
CROT-202ENST00000412227 BAGE3Q86Y29 109 aa12.7□□□□□ -0.38
CROT-202ENST00000412227 CBLN2Q8IUK8 224 aa12.7□□□□□ -0.38
CROT-202ENST00000412227 Q8NDZ9 215 aa12.7□□□□□ -0.38
CROT-202ENST00000412227 CDIP1Q9H305 208 aa12.69□□□□□ -0.38
CROT-202ENST00000412227 IGLV7-46A0A075B6I9 117 aa12.68□□□□□ -0.38
CROT-202ENST00000412227 CTAG1AP78358 180 aa12.68□□□□□ -0.38
CROT-202ENST00000412227 LINC00158P58513 81 aa12.67□□□□□ -0.38
CROT-202ENST00000412227 TPRXLQ17RH7 258 aa12.67□□□□□ -0.38
CROT-202ENST00000412227 C3orf22Q8N5N4 141 aa12.67□□□□□ -0.38
CROT-202ENST00000412227 HIGD2AQ9BW72 106 aa12.67□□□□□ -0.38
CROT-202ENST00000412227 SLC7A5P1Q8MH63 180 aa12.64□□□□□ -0.39
CROT-202ENST00000412227 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
CROT-202ENST00000412227 CHTOPQ9Y3Y2 248 aaKnown RBP12.63□□□□□ -0.39
CROT-202ENST00000412227 LCE2AQ5TA79 106 aaPredicted RBP12.6□□□□□ -0.39
CROT-202ENST00000412227 SPAG11AQ6PDA7 123 aa12.6□□□□□ -0.39
CROT-202ENST00000412227 SPRR4Q96PI1 79 aa12.6□□□□□ -0.39
CROT-202ENST00000412227 PPDPFQ9H3Y8 114 aa12.6□□□□□ -0.39
CROT-202ENST00000412227 FAT4Q6V0I7 4981 aa12.59□□□□□ -0.39
CROT-202ENST00000412227 ATP6V1G1O75348 118 aa12.59□□□□□ -0.39
CROT-202ENST00000412227 CHCHD1Q96BP2 118 aaKnown RBP12.59□□□□□ -0.39
CROT-202ENST00000412227 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
CROT-202ENST00000412227 KRTAP9-2Q9BYQ4 174 aa12.58□□□□□ -0.4
CROT-202ENST00000412227 ZNF706Q9Y5V0 76 aaPredicted RBP12.58□□□□□ -0.4
CROT-202ENST00000412227 SMIM13P0DJ93 91 aa12.56□□□□□ -0.4
CROT-202ENST00000412227 C4orf48Q5BLP8 95 aa12.56□□□□□ -0.4
CROT-202ENST00000412227 PRYO14603 147 aa12.55□□□□□ -0.4
CROT-202ENST00000412227 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
CROT-202ENST00000412227 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
CROT-202ENST00000412227 TRAV12-1A0A0B4J245 112 aa12.54□□□□□ -0.4
CROT-202ENST00000412227 IFI27L1Q96BM0 104 aa12.54□□□□□ -0.4
CROT-202ENST00000412227 MUC17Q685J3 4493 aa12.54□□□□□ -0.4
CROT-202ENST00000412227 NCR3O14931 201 aa12.53□□□□□ -0.4
CROT-202ENST00000412227 TRGC2P03986 189 aa12.53□□□□□ -0.4
CROT-202ENST00000412227 MIR7-3HGQ8N6C7 128 aa12.52□□□□□ -0.41
CROT-202ENST00000412227 FP248Q71RG6 208 aaPredicted RBP12.51□□□□□ -0.41
CROT-202ENST00000412227 LINC00337Q8N6G1 96 aa12.51□□□□□ -0.41
CROT-202ENST00000412227 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
CROT-202ENST00000412227 ETDCA0A1B0GVM5 59 aa12.5□□□□□ -0.41
CROT-202ENST00000412227 HERV-K104P63124 156 aa12.5□□□□□ -0.41
CROT-202ENST00000412227 DAND5Q8N907 189 aa12.5□□□□□ -0.41
CROT-202ENST00000412227 Q8NBF4 154 aa12.5□□□□□ -0.41
CROT-202ENST00000412227 KCNQ1DNQ9H478 68 aa12.5□□□□□ -0.41
CROT-202ENST00000412227 COLCA2A8K830 154 aa12.49□□□□□ -0.41
CROT-202ENST00000412227 SPRR1AP35321 89 aa12.49□□□□□ -0.41
CROT-202ENST00000412227 LINC00310P59036 64 aa12.49□□□□□ -0.41
CROT-202ENST00000412227 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
CROT-202ENST00000412227 HSBP1O75506 76 aa12.48□□□□□ -0.41
CROT-202ENST00000412227 NDUFA12Q9UI09 145 aa12.47□□□□□ -0.41
CROT-202ENST00000412227 TRBV10-3A0A0K0K1G6 114 aa12.46□□□□□ -0.41
CROT-202ENST00000412227 FAM19A2Q8N3H0 131 aa12.46□□□□□ -0.41
CROT-202ENST00000412227 MYMXA0A1B0GTQ4 84 aa12.45□□□□□ -0.42
CROT-202ENST00000412227 KRTAP4-16G5E9R7 235 aaPredicted RBP12.45□□□□□ -0.42
CROT-202ENST00000412227 S100A12P80511 92 aa12.45□□□□□ -0.42
CROT-202ENST00000412227 MAP1LC3CQ9BXW4 147 aa12.45□□□□□ -0.42
CROT-202ENST00000412227 SERF1AO75920 110 aa12.44□□□□□ -0.42
CROT-202ENST00000412227 SPINK1P00995 79 aa12.43□□□□□ -0.42
CROT-202ENST00000412227 KRTAP13-3Q3SY46 172 aa12.42□□□□□ -0.42
CROT-202ENST00000412227 GAGE2AQ6NT46 116 aa12.42□□□□□ -0.42
CROT-202ENST00000412227 H0Y8G0 127 aa12.41□□□□□ -0.42
CROT-202ENST00000412227 LINC00483Q53H64 154 aa12.41□□□□□ -0.42
CROT-202ENST00000412227 B5MCH6 92 aa12.39□□□□□ -0.43
CROT-202ENST00000412227 IGLV9-49A0A0B4J1Y8 123 aa12.38□□□□□ -0.43
CROT-202ENST00000412227 LEPROTL1O95214 131 aa12.38□□□□□ -0.43
CROT-202ENST00000412227 DDTP30046 118 aa12.38□□□□□ -0.43
CROT-202ENST00000412227 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
CROT-202ENST00000412227 MOBPQ13875 183 aa12.37□□□□□ -0.43
CROT-202ENST00000412227 LOC107984156A0A0G2JMH3 177 aa12.36□□□□□ -0.43
CROT-202ENST00000412227 LEPROTO15243 131 aa12.36□□□□□ -0.43
CROT-202ENST00000412227 ERC2-IT1O76042 136 aa12.36□□□□□ -0.43
CROT-202ENST00000412227 ARL17AQ8IVW1 177 aa12.36□□□□□ -0.43
CROT-202ENST00000412227 TRBV10-2A0A0K0K1G8 114 aa12.35□□□□□ -0.43
CROT-202ENST00000412227 ASB16-AS1Q495Z4 193 aa12.35□□□□□ -0.43
CROT-202ENST00000412227 SSBP3-AS1Q7Z2R9 100 aa12.35□□□□□ -0.43
CROT-202ENST00000412227 Q9BRP9 147 aa12.33□□□□□ -0.44
CROT-202ENST00000412227 HSPB8Q9UJY1 196 aa12.33□□□□□ -0.44
CROT-202ENST00000412227 Q6ZRX8 168 aa12.32□□□□□ -0.44
CROT-202ENST00000412227 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
CROT-202ENST00000412227 J3QQQ9 107 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BKO60814 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BJP06899 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BOP23527 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 PLNP26678 52 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BBP33778 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BDP58876 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 RPS29P62273 56 aaKnown RBP12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BCP62807 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST2H2BEQ16778 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.31□□□□□ -0.44
CROT-202ENST00000412227 Q8N377 158 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BHQ93079 126 aa12.31□□□□□ -0.44
CROT-202ENST00000412227 HIST1H2BNQ99877 126 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms