RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ADAMTSL4-AS1Q5T5F5 129 aa12.98□□□□□ -0.33
C4orf48-202ENST00000409860 SERTAD4-AS1Q5TG53 156 aa12.98□□□□□ -0.33
C4orf48-202ENST00000409860 BOD1L2Q8IYS8 172 aa12.98□□□□□ -0.33
C4orf48-202ENST00000409860 MIEN1Q9BRT3 115 aa12.98□□□□□ -0.33
C4orf48-202ENST00000409860 KIAA1109Q2LD37 5005 aa12.97□□□□□ -0.33
C4orf48-202ENST00000409860 M0QXV9 152 aa12.97□□□□□ -0.33
C4orf48-202ENST00000409860 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
C4orf48-202ENST00000409860 DLEU1O43261 78 aa12.96□□□□□ -0.33
C4orf48-202ENST00000409860 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
C4orf48-202ENST00000409860 C14orf144Q96I85 54 aa12.96□□□□□ -0.33
C4orf48-202ENST00000409860 SMIM6P0DI80 62 aa12.95□□□□□ -0.34
C4orf48-202ENST00000409860 NKAPP1Q8N9T2 125 aa12.95□□□□□ -0.34
C4orf48-202ENST00000409860 C7orf33Q8WU49 177 aa12.95□□□□□ -0.34
C4orf48-202ENST00000409860 IGLV5-37A0A075B6J1 123 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 LOC107984156A0A0G2JMH3 177 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 SMR3BP02814 79 aaPredicted RBP12.94□□□□□ -0.34
C4orf48-202ENST00000409860 SLC25A34Q6PIV7 304 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
C4orf48-202ENST00000409860 ARL17AQ8IVW1 177 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 SPANXDQ9BXN6 97 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 SPANXCQ9NY87 97 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 TP73-AS1Q9UF72 201 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
C4orf48-202ENST00000409860 VPREB1P12018 145 aa12.93□□□□□ -0.34
C4orf48-202ENST00000409860 NPC2P61916 151 aa12.93□□□□□ -0.34
C4orf48-202ENST00000409860 Q6ZVH6 145 aa12.93□□□□□ -0.34
C4orf48-202ENST00000409860 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
C4orf48-202ENST00000409860 LBHQ53QV2 105 aaPredicted RBP12.92□□□□□ -0.34
C4orf48-202ENST00000409860 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
C4orf48-202ENST00000409860 COPS9Q8WXC6 57 aa12.92□□□□□ -0.34
C4orf48-202ENST00000409860 HSPG2P98160 4391 aa12.92□□□□□ -0.34
C4orf48-202ENST00000409860 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
C4orf48-202ENST00000409860 SOSTDC1Q6X4U4 206 aa12.9□□□□□ -0.34
C4orf48-202ENST00000409860 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
C4orf48-202ENST00000409860 IFITM1P13164 125 aa12.89□□□□□ -0.35
C4orf48-202ENST00000409860 UBE2BP63146 152 aa12.89□□□□□ -0.35
C4orf48-202ENST00000409860 SRSF9Q13242 221 aaKnown RBP eCLIP12.89□□□□□ -0.35
C4orf48-202ENST00000409860 Q8NDZ9 215 aa12.89□□□□□ -0.35
C4orf48-202ENST00000409860 FAM229AH3BQW9 127 aa12.87□□□□□ -0.35
C4orf48-202ENST00000409860 NDUFC2O95298 119 aa12.87□□□□□ -0.35
C4orf48-202ENST00000409860 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
C4orf48-202ENST00000409860 EIF4EBP3O60516 100 aaPredicted RBP12.86□□□□□ -0.35
C4orf48-202ENST00000409860 Q8N1X5 172 aa12.86□□□□□ -0.35
C4orf48-202ENST00000409860 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
C4orf48-202ENST00000409860 M0R378 163 aa12.85□□□□□ -0.35
C4orf48-202ENST00000409860 NCR3O14931 201 aa12.85□□□□□ -0.35
C4orf48-202ENST00000409860 LINC00167Q96N53 147 aa12.85□□□□□ -0.35
C4orf48-202ENST00000409860 HIGD1BQ9P298 99 aa12.85□□□□□ -0.35
C4orf48-202ENST00000409860 RPL37AP61513 92 aaKnown RBP12.84□□□□□ -0.35
C4orf48-202ENST00000409860 PRR3P79522 188 aaKnown RBP12.84□□□□□ -0.35
C4orf48-202ENST00000409860 MUSTN1Q8IVN3 82 aa12.84□□□□□ -0.35
C4orf48-202ENST00000409860 TRBV10-2A0A0K0K1G8 114 aa12.83□□□□□ -0.36
C4orf48-202ENST00000409860 PLA2G1BP04054 148 aaKnown RBP12.83□□□□□ -0.36
C4orf48-202ENST00000409860 Q5VSD8 79 aa12.83□□□□□ -0.36
C4orf48-202ENST00000409860 HIST1H4GQ99525 98 aa12.83□□□□□ -0.36
C4orf48-202ENST00000409860 UQCR10Q9UDW1 63 aa12.83□□□□□ -0.36
C4orf48-202ENST00000409860 C2orf91Q6ZV80 131 aa12.82□□□□□ -0.36
C4orf48-202ENST00000409860 RPL37AP8A6NKH3 93 aa12.81□□□□□ -0.36
C4orf48-202ENST00000409860 HERC2O95714 4834 aa12.8□□□□□ -0.36
C4orf48-202ENST00000409860 FAT1Q14517 4588 aa12.8□□□□□ -0.36
C4orf48-202ENST00000409860 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
C4orf48-202ENST00000409860 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
C4orf48-202ENST00000409860 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
C4orf48-202ENST00000409860 C12orf57Q99622 126 aa12.79□□□□□ -0.36
C4orf48-202ENST00000409860 PSORS1C2Q9UIG4 136 aa12.79□□□□□ -0.36
C4orf48-202ENST00000409860 IGLV1-50A0A075B6I6 118 aa12.78□□□□□ -0.36
C4orf48-202ENST00000409860 LINC00518Q8N0U6 118 aa12.78□□□□□ -0.36
C4orf48-202ENST00000409860 S100A7L2Q5SY68 101 aa12.77□□□□□ -0.37
C4orf48-202ENST00000409860 C1orf137Q5JT78 98 aa12.76□□□□□ -0.37
C4orf48-202ENST00000409860 KRTAP17-1Q9BYP8 105 aa12.76□□□□□ -0.37
C4orf48-202ENST00000409860 PRO1933Q9H354 126 aa12.76□□□□□ -0.37
C4orf48-202ENST00000409860 TRBV10-3A0A0K0K1G6 114 aa12.75□□□□□ -0.37
C4orf48-202ENST00000409860 DDTP30046 118 aa12.75□□□□□ -0.37
C4orf48-202ENST00000409860 TAL2Q16559 108 aa12.75□□□□□ -0.37
C4orf48-202ENST00000409860 HNRNPA3P51991 378 aaKnown RBP12.73□□□□□ -0.37
C4orf48-202ENST00000409860 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
C4orf48-202ENST00000409860 A4D1N5 150 aa12.72□□□□□ -0.37
C4orf48-202ENST00000409860 PRYO14603 147 aa12.72□□□□□ -0.37
C4orf48-202ENST00000409860 IGLV6-57P01721 117 aa12.72□□□□□ -0.37
C4orf48-202ENST00000409860 KRTAP10-4P60372 401 aaPredicted RBP12.72□□□□□ -0.37
C4orf48-202ENST00000409860 HSD52Q0P140 79 aa12.71□□□□□ -0.37
C4orf48-202ENST00000409860 REG3GQ6UW15 175 aa12.71□□□□□ -0.37
C4orf48-202ENST00000409860 CBY1Q9Y3M2 126 aa12.71□□□□□ -0.37
C4orf48-202ENST00000409860 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
C4orf48-202ENST00000409860 BCE1O60756 84 aa12.7□□□□□ -0.38
C4orf48-202ENST00000409860 CEND1Q8N111 149 aa12.7□□□□□ -0.38
C4orf48-202ENST00000409860 LINC00337Q8N6G1 96 aa12.7□□□□□ -0.38
C4orf48-202ENST00000409860 TMEM126AQ9H061 195 aa12.7□□□□□ -0.38
C4orf48-202ENST00000409860 KCNQ1DNQ9H478 68 aa12.7□□□□□ -0.38
C4orf48-202ENST00000409860 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
C4orf48-202ENST00000409860 VPS13BQ7Z7G8 4022 aa12.69□□□□□ -0.38
C4orf48-202ENST00000409860 A6NDN8 102 aa12.68□□□□□ -0.38
C4orf48-202ENST00000409860 IGLV7-43P04211 117 aa12.68□□□□□ -0.38
C4orf48-202ENST00000409860 TRAV23DV6A0A075B6W5 121 aa12.67□□□□□ -0.38
C4orf48-202ENST00000409860 TMEM238LA0A1B0GVL6 79 aa12.66□□□□□ -0.38
C4orf48-202ENST00000409860 A6NJY4 79 aa12.66□□□□□ -0.38
C4orf48-202ENST00000409860 UBE2AP49459 152 aa12.65□□□□□ -0.38
C4orf48-202ENST00000409860 FAM19A1Q7Z5A9 133 aa12.64□□□□□ -0.39
C4orf48-202ENST00000409860 SPRR1AP35321 89 aa12.63□□□□□ -0.39
C4orf48-202ENST00000409860 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms