RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 COL27A1Q8IZC6 1860 aaPredicted RBP17.19■□□□□ 0.34
SPIRE1-202ENST00000409402 IGLV5-45A0A087WSX0 123 aa17.16■□□□□ 0.34
SPIRE1-202ENST00000409402 SPINK1P00995 79 aa17.16■□□□□ 0.34
SPIRE1-202ENST00000409402 SETD2Q9BYW2 2564 aaPredicted RBP17.15■□□□□ 0.34
SPIRE1-202ENST00000409402 PHF5AQ7RTV0 110 aaKnown RBP17.14■□□□□ 0.34
SPIRE1-202ENST00000409402 Q6ZRP5 223 aa17.14■□□□□ 0.33
SPIRE1-202ENST00000409402 A0A0U1RQV1 116 aa17.12■□□□□ 0.33
SPIRE1-202ENST00000409402 TRBV7-7A0A0K0K1E9 115 aa17.12■□□□□ 0.33
SPIRE1-202ENST00000409402 KLK9Q2XQG4 91 aa17.11■□□□□ 0.33
SPIRE1-202ENST00000409402 LINC00846Q9NV44 126 aa17.11■□□□□ 0.33
SPIRE1-202ENST00000409402 CRYGAP11844 174 aa17.1■□□□□ 0.33
SPIRE1-202ENST00000409402 Q9UF83 564 aa17.1■□□□□ 0.33
SPIRE1-202ENST00000409402 SMIM26A0A096LP01 95 aa17.07■□□□□ 0.32
SPIRE1-202ENST00000409402 CXCL6P80162 114 aa17.07■□□□□ 0.32
SPIRE1-202ENST00000409402 IGKV2D-30A0A075B6S6 120 aa17.07■□□□□ 0.32
SPIRE1-202ENST00000409402 IGKV2-30P06310 120 aa17.07■□□□□ 0.32
SPIRE1-202ENST00000409402 FASNP49327 2511 aaKnown RBP17.07■□□□□ 0.32
SPIRE1-202ENST00000409402 ELOF1P60002 83 aaKnown RBP17.06■□□□□ 0.32
SPIRE1-202ENST00000409402 GVQW2A0A096LPI5 108 aaPredicted RBP17.06■□□□□ 0.32
SPIRE1-202ENST00000409402 SPATA3Q8NHX4 192 aa17.06■□□□□ 0.32
SPIRE1-202ENST00000409402 TYMSOSQ8TAI1 123 aa17.03■□□□□ 0.32
SPIRE1-202ENST00000409402 Q8NBF4 154 aa17.03■□□□□ 0.32
SPIRE1-202ENST00000409402 DNAH10OSP0CZ25 163 aa17.03■□□□□ 0.32
SPIRE1-202ENST00000409402 Q6ZRX8 168 aa17.03■□□□□ 0.32
SPIRE1-202ENST00000409402 EPM2AB3EWF7 344 aa17.02■□□□□ 0.32
SPIRE1-202ENST00000409402 CHTF8P0CG12 524 aa17.01■□□□□ 0.31
SPIRE1-202ENST00000409402 hDV103S1A0JD37 113 aa17.01■□□□□ 0.31
SPIRE1-202ENST00000409402 MTORP42345 2549 aa17■□□□□ 0.31
SPIRE1-202ENST00000409402 C1orf64Q8NEQ6 169 aa17■□□□□ 0.31
SPIRE1-202ENST00000409402 TMEM254Q8TBM7 123 aa17■□□□□ 0.31
SPIRE1-202ENST00000409402 PLA2G1BP04054 148 aaKnown RBP16.99■□□□□ 0.31
SPIRE1-202ENST00000409402 PKD1L2Q7Z442 2459 aa16.99■□□□□ 0.31
SPIRE1-202ENST00000409402 PCSK5Q92824 1860 aa16.98■□□□□ 0.31
SPIRE1-202ENST00000409402 ANKRD17O75179 2603 aaKnown RBP16.97■□□□□ 0.31
SPIRE1-202ENST00000409402 K7EIL1 84 aa16.96■□□□□ 0.31
SPIRE1-202ENST00000409402 A0A1B0GW54 56 aa16.96■□□□□ 0.31
SPIRE1-202ENST00000409402 SOSTDC1Q6X4U4 206 aa16.95■□□□□ 0.3
SPIRE1-202ENST00000409402 TP53AIP1Q9HCN2 124 aa16.95■□□□□ 0.3
SPIRE1-202ENST00000409402 KRTAP10-11P60412 298 aa16.95■□□□□ 0.3
SPIRE1-202ENST00000409402 BCE1O60756 84 aa16.95■□□□□ 0.3
SPIRE1-202ENST00000409402 C7orf65Q6ZTY9 151 aa16.94■□□□□ 0.3
SPIRE1-202ENST00000409402 LINC00476Q8WZB0 136 aa16.93■□□□□ 0.3
SPIRE1-202ENST00000409402 SMIM29Q86T20 159 aa16.93■□□□□ 0.3
SPIRE1-202ENST00000409402 A0A096LNT2 108 aa16.91■□□□□ 0.3
SPIRE1-202ENST00000409402 CSNK1G2-AS1Q8NCQ2 148 aa16.9■□□□□ 0.3
SPIRE1-202ENST00000409402 RPL37AP61513 92 aaKnown RBP16.89■□□□□ 0.29
SPIRE1-202ENST00000409402 POLQO75417 2590 aa16.89■□□□□ 0.29
SPIRE1-202ENST00000409402 CENPFP49454 3210 aa16.89■□□□□ 0.29
SPIRE1-202ENST00000409402 J3QL48 77 aa16.87■□□□□ 0.29
SPIRE1-202ENST00000409402 C19orf73Q9NVV2 129 aa16.87■□□□□ 0.29
SPIRE1-202ENST00000409402 FAM218AQ96MZ4 157 aa16.87■□□□□ 0.29
SPIRE1-202ENST00000409402 ST20-AS1Q8NBB2 130 aa16.86■□□□□ 0.29
SPIRE1-202ENST00000409402 LINC00313P59037 77 aa16.86■□□□□ 0.29
SPIRE1-202ENST00000409402 ACANP16112 2415 aa16.83■□□□□ 0.28
SPIRE1-202ENST00000409402 KRTAP10-3P60369 221 aa16.79■□□□□ 0.28
SPIRE1-202ENST00000409402 Q6ZQT0 140 aa16.79■□□□□ 0.28
SPIRE1-202ENST00000409402 LOC110117498A0A087WWA1 95 aa16.78■□□□□ 0.28
SPIRE1-202ENST00000409402 VPREB1P12018 145 aa16.78■□□□□ 0.28
SPIRE1-202ENST00000409402 FAM168BA1KXE4 195 aa16.77■□□□□ 0.28
SPIRE1-202ENST00000409402 PSPHP1O15172 72 aa16.76■□□□□ 0.27
SPIRE1-202ENST00000409402 F8P00451 2351 aa16.75■□□□□ 0.27
SPIRE1-202ENST00000409402 MUC4Q99102 2169 aa16.75■□□□□ 0.27
SPIRE1-202ENST00000409402 ACYP2P14621 99 aa16.74■□□□□ 0.27
SPIRE1-202ENST00000409402 ATP11AUNQ6ZP68 121 aa16.72■□□□□ 0.27
SPIRE1-202ENST00000409402 IGLV6-57P01721 117 aa16.72■□□□□ 0.27
SPIRE1-202ENST00000409402 Q96NJ1 140 aa16.72■□□□□ 0.27
SPIRE1-202ENST00000409402 SERTAD4-AS1Q5TG53 156 aa16.7■□□□□ 0.26
SPIRE1-202ENST00000409402 CDIP1Q9H305 208 aa16.69■□□□□ 0.26
SPIRE1-202ENST00000409402 IGLV1-50A0A075B6I6 118 aa16.69■□□□□ 0.26
SPIRE1-202ENST00000409402 EPG5Q9HCE0 2579 aa16.68■□□□□ 0.26
SPIRE1-202ENST00000409402 PMAIP1Q13794 54 aa16.68■□□□□ 0.26
SPIRE1-202ENST00000409402 TM2D3Q9BRN9 247 aa16.66■□□□□ 0.26
SPIRE1-202ENST00000409402 TRBV7-4A0A0J9YYF1 115 aa16.66■□□□□ 0.26
SPIRE1-202ENST00000409402 C1orf195Q5TG92 126 aa16.66■□□□□ 0.26
SPIRE1-202ENST00000409402 SMCPP49901 116 aaPredicted RBP16.65■□□□□ 0.26
SPIRE1-202ENST00000409402 H3BPC8 53 aa16.65■□□□□ 0.26
SPIRE1-202ENST00000409402 A0A1B0GU69 56 aa16.64■□□□□ 0.25
SPIRE1-202ENST00000409402 PRR34Q9NV39 138 aa16.64■□□□□ 0.25
SPIRE1-202ENST00000409402 C8orf87E5RJ46 101 aa16.64■□□□□ 0.25
SPIRE1-202ENST00000409402 LITAFQ99732 161 aa16.63■□□□□ 0.25
SPIRE1-202ENST00000409402 GIG44P09565 113 aaPredicted RBP16.63■□□□□ 0.25
SPIRE1-202ENST00000409402 KCNQ1DNQ9H478 68 aa16.63■□□□□ 0.25
SPIRE1-202ENST00000409402 A0A087WTM6 91 aa16.62■□□□□ 0.25
SPIRE1-202ENST00000409402 TRAV22A0A0B4J277 110 aa16.62■□□□□ 0.25
SPIRE1-202ENST00000409402 KRTAP1-3Q8IUG1 177 aa16.61■□□□□ 0.25
SPIRE1-202ENST00000409402 C15orf56Q8N910 161 aa16.6■□□□□ 0.25
SPIRE1-202ENST00000409402 LINC00612Q8N6U2 182 aa16.59■□□□□ 0.25
SPIRE1-202ENST00000409402 A8MWP4 228 aa16.55■□□□□ 0.24
SPIRE1-202ENST00000409402 PRO0461Q9UI25 63 aa16.55■□□□□ 0.24
SPIRE1-202ENST00000409402 LINC00336Q6ZUF6 198 aa16.55■□□□□ 0.24
SPIRE1-202ENST00000409402 ZNF861PO60384 105 aa16.54■□□□□ 0.24
SPIRE1-202ENST00000409402 LINC00304Q8N9R0 145 aa16.54■□□□□ 0.24
SPIRE1-202ENST00000409402 SPAG11AQ6PDA7 123 aa16.51■□□□□ 0.23
SPIRE1-202ENST00000409402 KRTAP1-1Q07627 177 aa16.51■□□□□ 0.23
SPIRE1-202ENST00000409402 C9orf163Q8N9P6 203 aa16.5■□□□□ 0.23
SPIRE1-202ENST00000409402 LINC00528Q8N1L1 170 aa16.5■□□□□ 0.23
SPIRE1-202ENST00000409402 LOC101927531A0A1B0GV80 90 aa16.49■□□□□ 0.23
SPIRE1-202ENST00000409402 SSBP3-AS1Q7Z2R9 100 aa16.49■□□□□ 0.23
SPIRE1-202ENST00000409402 MRPL34Q9BQ48 92 aaKnown RBP16.49■□□□□ 0.23
SPIRE1-202ENST00000409402 APLNQ9ULZ1 77 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms