RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 TENM3Q9P273 2699 aa4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 GVQW2A0A096LPI5 108 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 J3QR89 54 aa4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 M0QXV9 152 aa4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 NDUFC2O95298 119 aa4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 NHLRC4P0CG21 123 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 KRTAP21-3Q3LHN1 58 aa4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 KRTAP26-1Q6PEX3 210 aa4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 UNQ6190/PRO20217Q6UXQ8 127 aa4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 NTN5Q8WTR8 489 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-202ENST00000409364 IGKV2-28A0A075B6P5 120 aa4.2□□□□□ -1.74
GTF3C3-202ENST00000409364 IGKV2D-28P01615 120 aa4.2□□□□□ -1.74
GTF3C3-202ENST00000409364 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
GTF3C3-202ENST00000409364 ETDBQ3ZM63 59 aa4.2□□□□□ -1.74
GTF3C3-202ENST00000409364 LINC01620Q4KN68 170 aa4.2□□□□□ -1.74
GTF3C3-202ENST00000409364 LINC00588Q9Y4M8 146 aa4.2□□□□□ -1.74
GTF3C3-202ENST00000409364 IGKV2D-24A0A075B6R9 120 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 C9JAW5 83 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 LST1O00453 97 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 SLC25A20O43772 301 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 C10orf25Q5T742 122 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 C6orf223Q8N319 242 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 LINC00337Q8N6G1 96 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 RMI2Q96E14 147 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 C2orf48Q96LS8 159 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 UPK3BQ9BT76 320 aa4.19□□□□□ -1.74
GTF3C3-202ENST00000409364 TRBV10-2A0A0K0K1G8 114 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 H0YGX0 51 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 C9orf116Q5BN46 136 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 MTURNQ8N3F0 131 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 ANKRD29Q8N6D5 301 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 OR13C6PQ8NH95 151 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 TEN1Q86WV5 123 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 CLEC2BQ92478 149 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 LINC00526Q96FQ7 95 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 CAMK2N2Q96S95 79 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 TMEM126AQ9H061 195 aa4.18□□□□□ -1.74
GTF3C3-202ENST00000409364 H3BT86 120 aa4.17□□□□□ -1.74
GTF3C3-202ENST00000409364 TRACP01848 142 aa4.17□□□□□ -1.74
GTF3C3-202ENST00000409364 SMIM11BQ8TCY0 68 aa4.17□□□□□ -1.74
GTF3C3-202ENST00000409364 C6orf48Q9UBA6 75 aa4.17□□□□□ -1.74
GTF3C3-202ENST00000409364 RNF151Q2KHN1 245 aa4.16□□□□□ -1.74
GTF3C3-202ENST00000409364 HIGD2BQ4VC39 106 aa4.16□□□□□ -1.74
GTF3C3-202ENST00000409364 C15orf56Q8N910 161 aa4.16□□□□□ -1.74
GTF3C3-202ENST00000409364 PPDPFLQ8WWR9 84 aa4.16□□□□□ -1.74
GTF3C3-202ENST00000409364 CARD19Q96LW7 228 aa4.16□□□□□ -1.74
GTF3C3-202ENST00000409364 VPS25Q9BRG1 176 aa4.16□□□□□ -1.74
GTF3C3-202ENST00000409364 Q9HAA7 133 aa4.16□□□□□ -1.74
GTF3C3-202ENST00000409364 A0A1B0GV72 72 aa4.15□□□□□ -1.74
GTF3C3-202ENST00000409364 NDUFC2-KCTD14E9PQ53 114 aa4.15□□□□□ -1.75
GTF3C3-202ENST00000409364 SNCGO76070 127 aa4.15□□□□□ -1.75
GTF3C3-202ENST00000409364 PRR3P79522 188 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-202ENST00000409364 SYCNQ0VAF6 134 aa4.15□□□□□ -1.75
GTF3C3-202ENST00000409364 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
GTF3C3-202ENST00000409364 Q6ZRU5 148 aa4.15□□□□□ -1.75
GTF3C3-202ENST00000409364 APLNQ9ULZ1 77 aa4.15□□□□□ -1.75
GTF3C3-202ENST00000409364 STAB2Q8WWQ8 2551 aa4.13□□□□□ -1.75
GTF3C3-202ENST00000409364 A0A1B0GX51 115 aa4.13□□□□□ -1.75
GTF3C3-202ENST00000409364 NUPR2A6NF83 97 aa4.13□□□□□ -1.75
GTF3C3-202ENST00000409364 DNAL4O96015 105 aa4.13□□□□□ -1.75
GTF3C3-202ENST00000409364 BAALC-AS2P0C853 105 aa4.13□□□□□ -1.75
GTF3C3-202ENST00000409364 UBE2DNLQ8IWF7 75 aa4.13□□□□□ -1.75
GTF3C3-202ENST00000409364 HUWE1Q7Z6Z7 4374 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-202ENST00000409364 USP17L23D6RBM5 183 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 NCR3O14931 201 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 IGLV6-57P01721 117 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 TLX1NBP0CAT3 122 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 FAM218AQ96MZ4 157 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 XAGE1AQ9HD64 81 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 M0R378 163 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 Q8NDZ9 215 aa4.12□□□□□ -1.75
GTF3C3-202ENST00000409364 TEX49A0A1B0GTD5 131 aa4.11□□□□□ -1.75
GTF3C3-202ENST00000409364 RPL18AQ02543 176 aaKnown RBP4.11□□□□□ -1.75
GTF3C3-202ENST00000409364 GAGE2EQ4V326 116 aa4.11□□□□□ -1.75
GTF3C3-202ENST00000409364 Q6ZRP5 223 aa4.11□□□□□ -1.75
GTF3C3-202ENST00000409364 GAGE2DQ9UEU5 116 aa4.11□□□□□ -1.75
GTF3C3-202ENST00000409364 MEGF8Q7Z7M0 2845 aa4.11□□□□□ -1.75
GTF3C3-202ENST00000409364 A0A087WYN8 130 aa4.1□□□□□ -1.75
GTF3C3-202ENST00000409364 LECT2O14960 151 aa4.1□□□□□ -1.75
GTF3C3-202ENST00000409364 SCGB1A1P11684 91 aa4.1□□□□□ -1.75
GTF3C3-202ENST00000409364 VPREB1P12018 145 aa4.1□□□□□ -1.75
GTF3C3-202ENST00000409364 C6orf99Q4VX62 202 aa4.1□□□□□ -1.75
GTF3C3-202ENST00000409364 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 PSCAO43653 123 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 SLPIP03973 132 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 TTC32Q5I0X7 151 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 LINC00575Q6W349 94 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 Q8N814 137 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 SIGMAR1Q99720 223 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 ORMDL1Q9P0S3 153 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 PLA2G2DQ9UNK4 145 aa4.09□□□□□ -1.75
GTF3C3-202ENST00000409364 TRAV23DV6A0A075B6W5 121 aa4.09□□□□□ -1.76
GTF3C3-202ENST00000409364 TRBV10-3A0A0K0K1G6 114 aa4.09□□□□□ -1.76
GTF3C3-202ENST00000409364 H3BQ85 93 aa4.09□□□□□ -1.76
GTF3C3-202ENST00000409364 C14orf177Q52M58 125 aa4.09□□□□□ -1.76
GTF3C3-202ENST00000409364 CASC10Q5T4H9 136 aa4.09□□□□□ -1.76
GTF3C3-202ENST00000409364 LINC00167Q96N53 147 aa4.09□□□□□ -1.76
GTF3C3-202ENST00000409364 DNAH9Q9NYC9 4486 aa4.08□□□□□ -1.76
GTF3C3-202ENST00000409364 hADV29S1A0JD25 119 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms