RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 ZNF469Q96JG9 3925 aaPredicted RBP15.27■□□□□ 0.04
CUEDC1-202ENST00000407144 OTOGQ6ZRI0 2925 aa15.27■□□□□ 0.03
CUEDC1-202ENST00000407144 Q6ZQY7 126 aa15.26■□□□□ 0.03
CUEDC1-202ENST00000407144 hDV103S1A0JD37 113 aa15.24■□□□□ 0.03
CUEDC1-202ENST00000407144 NOP10Q9NPE3 64 aaKnown RBP15.24■□□□□ 0.03
CUEDC1-202ENST00000407144 KIAA0087Q14695 138 aa15.24■□□□□ 0.03
CUEDC1-202ENST00000407144 IGHV4-59P01825 116 aa15.23■□□□□ 0.03
CUEDC1-202ENST00000407144 IGKV4-1P06312 121 aa15.22■□□□□ 0.03
CUEDC1-202ENST00000407144 CD164L2Q6UWJ8 174 aa15.22■□□□□ 0.03
CUEDC1-202ENST00000407144 STHQ8IWL8 128 aa15.22■□□□□ 0.03
CUEDC1-202ENST00000407144 Q8NDZ9 215 aa15.22■□□□□ 0.03
CUEDC1-202ENST00000407144 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.21■□□□□ 0.03
CUEDC1-202ENST00000407144 CREBBPQ92793 2442 aa15.21■□□□□ 0.02
CUEDC1-202ENST00000407144 IGLV6-57P01721 117 aa15.21■□□□□ 0.02
CUEDC1-202ENST00000407144 DEFB114Q30KQ6 69 aa15.21■□□□□ 0.02
CUEDC1-202ENST00000407144 TRGV2A0A075B6R0 118 aa15.2■□□□□ 0.02
CUEDC1-202ENST00000407144 IGHV4-30-2A0A087WSY4 118 aa15.2■□□□□ 0.02
CUEDC1-202ENST00000407144 MSMBP08118 114 aa15.19■□□□□ 0.02
CUEDC1-202ENST00000407144 A0A1B0GUV1 79 aa15.19■□□□□ 0.02
CUEDC1-202ENST00000407144 COX7BP24311 80 aa15.19■□□□□ 0.02
CUEDC1-202ENST00000407144 TRGV4A0A0C4DH28 118 aa15.18■□□□□ 0.02
CUEDC1-202ENST00000407144 ODF3L2Q3SX64 289 aa15.18■□□□□ 0.02
CUEDC1-202ENST00000407144 ITPR3Q14573 2671 aa15.18■□□□□ 0.02
CUEDC1-202ENST00000407144 ZANQ9Y493 2812 aa15.17■□□□□ 0.02
CUEDC1-202ENST00000407144 C16orf74Q96GX8 76 aa15.17■□□□□ 0.02
CUEDC1-202ENST00000407144 HIGD2AQ9BW72 106 aa15.17■□□□□ 0.02
CUEDC1-202ENST00000407144 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.16■□□□□ 0.02
CUEDC1-202ENST00000407144 CCL24O00175 119 aa15.15■□□□□ 0.02
CUEDC1-202ENST00000407144 DEFB136Q30KP8 78 aa15.15■□□□□ 0.02
CUEDC1-202ENST00000407144 DEFB112Q30KQ8 113 aa15.15■□□□□ 0.02
CUEDC1-202ENST00000407144 Q6ZRP5 223 aa15.15■□□□□ 0.02
CUEDC1-202ENST00000407144 CD164Q04900 197 aa15.15■□□□□ 0.02
CUEDC1-202ENST00000407144 LCE6AA0A183 80 aa15.13■□□□□ 0.01
CUEDC1-202ENST00000407144 FLNAP21333 2647 aaKnown RBP15.12■□□□□ 0.01
CUEDC1-202ENST00000407144 ZNF702PQ9H963 129 aa15.12■□□□□ 0.01
CUEDC1-202ENST00000407144 DAD1P61803 113 aa15.12■□□□□ 0.01
CUEDC1-202ENST00000407144 C18orf65Q6ZTR6 163 aa15.12■□□□□ 0.01
CUEDC1-202ENST00000407144 ACANP16112 2415 aa15.11■□□□□ 0.01
CUEDC1-202ENST00000407144 C9orf116Q5BN46 136 aaPredicted RBP15.1■□□□□ 0.01
CUEDC1-202ENST00000407144 DIRC1Q969H9 104 aa15.09■□□□□ 0.01
CUEDC1-202ENST00000407144 Q8N9L7 120 aa15.09■□□□□ 0.01
CUEDC1-202ENST00000407144 LINC01006Q8NI28 216 aa15.09■□□□□ 0.01
CUEDC1-202ENST00000407144 C1orf64Q8NEQ6 169 aa15.08■□□□□ 0
CUEDC1-202ENST00000407144 HIVEP1P15822 2718 aa15.07■□□□□ 0
CUEDC1-202ENST00000407144 KHDC1LQ5JSQ8 128 aa15.07■□□□□ 0
CUEDC1-202ENST00000407144 LINC00269Q8N2A0 174 aa15.07■□□□□ 0
CUEDC1-202ENST00000407144 C4orf3Q8WVX3 66 aa15.07■□□□□ 0
CUEDC1-202ENST00000407144 ESM1Q9NQ30 184 aa15.06■□□□□ 0
CUEDC1-202ENST00000407144 B4DSR2 109 aa15.05■□□□□ 0
CUEDC1-202ENST00000407144 CELA1Q9UNI1 258 aa15.05■□□□□ 0
CUEDC1-202ENST00000407144 TLN2Q9Y4G6 2542 aa15.05■□□□□ -0
CUEDC1-202ENST00000407144 CCL19Q99731 98 aa15.05■□□□□ -0
CUEDC1-202ENST00000407144 TEP1Q99973 2627 aaKnown RBP15.05■□□□□ -0
CUEDC1-202ENST00000407144 IGHV4-30-4P0DP06 118 aa15.02■□□□□ -0
CUEDC1-202ENST00000407144 ELOF1P60002 83 aaKnown RBP15.02■□□□□ -0
CUEDC1-202ENST00000407144 TRAV22A0A0B4J277 110 aa15.01□□□□□ -0.01
CUEDC1-202ENST00000407144 GIG44P09565 113 aaPredicted RBP15.01□□□□□ -0.01
CUEDC1-202ENST00000407144 CLPSL2Q6UWE3 100 aa15.01□□□□□ -0.01
CUEDC1-202ENST00000407144 ZCCHC13Q8WW36 166 aaKnown RBP15.01□□□□□ -0.01
CUEDC1-202ENST00000407144 CYP4F30PQ9H0H9 118 aa15.01□□□□□ -0.01
CUEDC1-202ENST00000407144 A0A0J9YWU9 116 aa15.01□□□□□ -0.01
CUEDC1-202ENST00000407144 CHCHD10Q8WYQ3 142 aaPredicted RBP15□□□□□ -0.01
CUEDC1-202ENST00000407144 F8P00451 2351 aa15□□□□□ -0.01
CUEDC1-202ENST00000407144 ZNF73O43830 326 aaPredicted RBP15□□□□□ -0.01
CUEDC1-202ENST00000407144 MTORP42345 2549 aa14.99□□□□□ -0.01
CUEDC1-202ENST00000407144 CSPG4Q6UVK1 2322 aa14.98□□□□□ -0.01
CUEDC1-202ENST00000407144 LINC00612Q8N6U2 182 aa14.98□□□□□ -0.01
CUEDC1-202ENST00000407144 DEFB113Q30KQ7 82 aa14.98□□□□□ -0.01
CUEDC1-202ENST00000407144 C2CD3Q4AC94 2353 aa14.97□□□□□ -0.01
CUEDC1-202ENST00000407144 HIGD2BQ4VC39 106 aa14.97□□□□□ -0.01
CUEDC1-202ENST00000407144 LRCOL1A6NCL2 159 aa14.97□□□□□ -0.01
CUEDC1-202ENST00000407144 PSPHP1O15172 72 aa14.95□□□□□ -0.02
CUEDC1-202ENST00000407144 KRTAP1-3Q8IUG1 177 aa14.95□□□□□ -0.02
CUEDC1-202ENST00000407144 LYRM9A8MSI8 78 aa14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 CMC4P56277 68 aaPredicted RBP14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 UNQ6190/PRO20217Q6UXQ8 127 aa14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 SMIM29Q86T20 159 aa14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 FAM30AQ9NZY2 134 aa14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 C10orf25Q5T742 122 aa14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 Q6YL49 198 aa14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 CSNK1G2-AS1Q8NCQ2 148 aa14.94□□□□□ -0.02
CUEDC1-202ENST00000407144 A0A1B0GW54 56 aa14.92□□□□□ -0.02
CUEDC1-202ENST00000407144 GYPEP15421 78 aa14.92□□□□□ -0.02
CUEDC1-202ENST00000407144 GVQW2A0A096LPI5 108 aaPredicted RBP14.91□□□□□ -0.02
CUEDC1-202ENST00000407144 LINC01356Q8N9X3 169 aa14.91□□□□□ -0.02
CUEDC1-202ENST00000407144 PSCAO43653 123 aa14.91□□□□□ -0.02
CUEDC1-202ENST00000407144 SPAG11BQ08648 103 aa14.9□□□□□ -0.02
CUEDC1-202ENST00000407144 REG3AQ06141 175 aa14.89□□□□□ -0.03
CUEDC1-202ENST00000407144 RETNQ9HD89 108 aa14.89□□□□□ -0.03
CUEDC1-202ENST00000407144 SONP18583 2426 aaKnown RBP14.89□□□□□ -0.03
CUEDC1-202ENST00000407144 SYCNQ0VAF6 134 aa14.88□□□□□ -0.03
CUEDC1-202ENST00000407144 KLK12Q9UKR0 248 aa14.88□□□□□ -0.03
CUEDC1-202ENST00000407144 CR1P17927 2039 aa14.88□□□□□ -0.03
CUEDC1-202ENST00000407144 UBE2BP63146 152 aa14.88□□□□□ -0.03
CUEDC1-202ENST00000407144 NIPBLQ6KC79 2804 aaeCLIP14.87□□□□□ -0.03
CUEDC1-202ENST00000407144 LINC00528Q8N1L1 170 aa14.87□□□□□ -0.03
CUEDC1-202ENST00000407144 IGLV10-54A0A075B6I4 117 aa14.86□□□□□ -0.03
CUEDC1-202ENST00000407144 ETDCA0A1B0GVM5 59 aa14.86□□□□□ -0.03
CUEDC1-202ENST00000407144 MRPL55Q7Z7F7 128 aaKnown RBP14.85□□□□□ -0.03
CUEDC1-202ENST00000407144 NSD1Q96L73 2696 aaPredicted RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms