RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 Q8NBF4 154 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 H7C423 109 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 BEAN1Q3B7T3 259 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 CDC42SE2Q9NRR3 84 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 MTORP42345 2549 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 DAZ2Q13117 558 aaKnown RBP3.51□□□□□ -1.85
SMAD4-202ENST00000398417 C7orf65Q6ZTY9 151 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 DAZ3Q9NR90 486 aaKnown RBP3.51□□□□□ -1.85
SMAD4-202ENST00000398417 CCL18P55774 89 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 DHRS4-AS1Q9P1J3 65 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 Q8N2B8 174 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 NDUFC1O43677 76 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 TRBV10-1A0A0K0K1A3 114 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 INAFM1C9JVW0 142 aa3.51□□□□□ -1.85
SMAD4-202ENST00000398417 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.51□□□□□ -1.85
SMAD4-202ENST00000398417 CFAP46Q8IYW2 2715 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 TACC2O95359 2948 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 IGLV9-49A0A0B4J1Y8 123 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 LECT2O14960 151 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 WFDC10BQ8IUB3 73 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 KMT2BQ9UMN6 2715 aaPredicted RBP3.5□□□□□ -1.85
SMAD4-202ENST00000398417 LINC00959A0A1B0GUT2 108 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 FAM104AQ969W3 186 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 FN1P02751 2386 aaKnown RBP3.5□□□□□ -1.85
SMAD4-202ENST00000398417 LST1O00453 97 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 CCDC179H3BU77 68 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 ESRGQ1W209 222 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 TRBV6-4A0A1B0GX49 114 aa3.5□□□□□ -1.85
SMAD4-202ENST00000398417 SBSPONQ8IVN8 264 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 LINC00526Q96FQ7 95 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 SETD2Q9BYW2 2564 aaPredicted RBP3.49□□□□□ -1.85
SMAD4-202ENST00000398417 HECTD1Q9ULT8 2610 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 A0A096LNI7 61 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 FHL3Q13643 280 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 DEFB135Q30KP9 77 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 TRBV6-8A0A0A6YYG3 113 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 C9orf66Q5T8R8 295 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 KLK5Q9Y337 293 aaPredicted RBP3.49□□□□□ -1.85
SMAD4-202ENST00000398417 X6R8D5 127 aa3.49□□□□□ -1.85
SMAD4-202ENST00000398417 FAM236AA0A1B0GUQ0 79 aa3.48□□□□□ -1.85
SMAD4-202ENST00000398417 FAM236BA0A1B0GV22 79 aa3.48□□□□□ -1.85
SMAD4-202ENST00000398417 B9D2Q9BPU9 175 aa3.48□□□□□ -1.85
SMAD4-202ENST00000398417 IGF2RP11717 2491 aa3.48□□□□□ -1.85
SMAD4-202ENST00000398417 M0R2N4 97 aa3.48□□□□□ -1.85
SMAD4-202ENST00000398417 NREPQ16612 68 aa3.48□□□□□ -1.85
SMAD4-202ENST00000398417 LY6G6DO95868 133 aa3.48□□□□□ -1.85
SMAD4-202ENST00000398417 UQCRQO14949 82 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 LINC00269Q8N2A0 174 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 Q6ZQY7 126 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 SMIM11BQ8TCY0 68 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 PRO0255Q9UI72 69 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 A0A087WYN8 130 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 A8MTW9 85 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 CHCHD10Q8WYQ3 142 aaPredicted RBP3.47□□□□□ -1.85
SMAD4-202ENST00000398417 TRAV22A0A0B4J277 110 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.47□□□□□ -1.85
SMAD4-202ENST00000398417 TRBV10-3A0A0K0K1G6 114 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 IGLV1-51P01701 117 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 Q8N9L7 120 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 TM2D3Q9BRN9 247 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 C16orf95Q9H693 158 aa3.47□□□□□ -1.85
SMAD4-202ENST00000398417 ANKRD17O75179 2603 aaKnown RBP3.46□□□□□ -1.85
SMAD4-202ENST00000398417 CENPEQ02224 2701 aa3.46□□□□□ -1.86
SMAD4-202ENST00000398417 SPART-AS1P0CW21 52 aa3.46□□□□□ -1.86
SMAD4-202ENST00000398417 PRR3P79522 188 aaKnown RBP3.46□□□□□ -1.86
SMAD4-202ENST00000398417 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
SMAD4-202ENST00000398417 KIR2DL5BQ8NHK3 375 aa3.46□□□□□ -1.86
SMAD4-202ENST00000398417 H0YGX0 51 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 RPL37AP8A6NKH3 93 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 H3BQ85 93 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 CCKP06307 115 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 KRTAP10-3P60369 221 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 SPINK6Q6UWN8 80 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 KLK12Q9UKR0 248 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 C9orf116Q5BN46 136 aaPredicted RBP3.45□□□□□ -1.86
SMAD4-202ENST00000398417 CRIPTQ9P021 101 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 Q8N3U1 123 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 NHLRC4P0CG21 123 aaPredicted RBP3.45□□□□□ -1.86
SMAD4-202ENST00000398417 LCA10Q71F78 164 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 KRTAP1-3Q8IUG1 177 aa3.45□□□□□ -1.86
SMAD4-202ENST00000398417 IBA57-AS1B1ANH7 110 aa3.44□□□□□ -1.86
SMAD4-202ENST00000398417 USP24Q9UPU5 2620 aa3.44□□□□□ -1.86
SMAD4-202ENST00000398417 LINC00483Q53H64 154 aa3.44□□□□□ -1.86
SMAD4-202ENST00000398417 FAM19A5Q7Z5A7 132 aaPredicted RBP3.44□□□□□ -1.86
SMAD4-202ENST00000398417 LINC00643Q86TS7 51 aa3.44□□□□□ -1.86
SMAD4-202ENST00000398417 A0A087WVE0 104 aa3.44□□□□□ -1.86
SMAD4-202ENST00000398417 LY6G6CO95867 125 aa3.44□□□□□ -1.86
SMAD4-202ENST00000398417 COX17Q14061 63 aa3.44□□□□□ -1.86
SMAD4-202ENST00000398417 GIG44P09565 113 aaPredicted RBP3.44□□□□□ -1.86
SMAD4-202ENST00000398417 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
SMAD4-202ENST00000398417 LINC00337Q8N6G1 96 aa3.43□□□□□ -1.86
SMAD4-202ENST00000398417 C11orf45Q8TAV5 145 aa3.43□□□□□ -1.86
SMAD4-202ENST00000398417 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
SMAD4-202ENST00000398417 SPATA3Q8NHX4 192 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms