RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TLX1NBP0CAT3 122 aa13.63□□□□□ -0.23
CPNE1-204ENST00000397443 KRTAP10-2P60368 255 aa13.63□□□□□ -0.23
CPNE1-204ENST00000397443 COPS9Q8WXC6 57 aa13.62□□□□□ -0.23
CPNE1-204ENST00000397443 NHP2Q9NX24 153 aaKnown RBP13.62□□□□□ -0.23
CPNE1-204ENST00000397443 A0A096LNI7 61 aa13.61□□□□□ -0.23
CPNE1-204ENST00000397443 C9orf129Q5T035 196 aaKnown RBP13.61□□□□□ -0.23
CPNE1-204ENST00000397443 DNAH11Q96DT5 4516 aa13.61□□□□□ -0.23
CPNE1-204ENST00000397443 Q8NDZ9 215 aa13.6□□□□□ -0.23
CPNE1-204ENST00000397443 K7ERJ3 54 aa13.6□□□□□ -0.23
CPNE1-204ENST00000397443 PRR3P79522 188 aaKnown RBP13.6□□□□□ -0.23
CPNE1-204ENST00000397443 TMEM238LA0A1B0GVL6 79 aa13.59□□□□□ -0.23
CPNE1-204ENST00000397443 A6NJY4 79 aa13.59□□□□□ -0.23
CPNE1-204ENST00000397443 CHTF8P0CG12 524 aa13.59□□□□□ -0.23
CPNE1-204ENST00000397443 SDIM1Q6ZPB5 146 aa13.58□□□□□ -0.23
CPNE1-204ENST00000397443 RYR3Q15413 4870 aa13.58□□□□□ -0.24
CPNE1-204ENST00000397443 LINC00336Q6ZUF6 198 aa13.57□□□□□ -0.24
CPNE1-204ENST00000397443 FAM168BA1KXE4 195 aa13.56□□□□□ -0.24
CPNE1-204ENST00000397443 CFC1BP0CG36 223 aa13.56□□□□□ -0.24
CPNE1-204ENST00000397443 CFC1P0CG37 223 aa13.56□□□□□ -0.24
CPNE1-204ENST00000397443 LOC107984156A0A0G2JMH3 177 aa13.56□□□□□ -0.24
CPNE1-204ENST00000397443 C16orf90A8MZG2 172 aa13.56□□□□□ -0.24
CPNE1-204ENST00000397443 ARL17AQ8IVW1 177 aa13.56□□□□□ -0.24
CPNE1-204ENST00000397443 PKD1P98161 4303 aa13.55□□□□□ -0.24
CPNE1-204ENST00000397443 NCR3O14931 201 aa13.55□□□□□ -0.24
CPNE1-204ENST00000397443 A6NDN8 102 aa13.54□□□□□ -0.24
CPNE1-204ENST00000397443 DNAH5Q8TE73 4624 aa13.53□□□□□ -0.24
CPNE1-204ENST00000397443 IGKV2-28A0A075B6P5 120 aa13.53□□□□□ -0.24
CPNE1-204ENST00000397443 IGKV2D-28P01615 120 aa13.53□□□□□ -0.24
CPNE1-204ENST00000397443 SERTAD4-AS1Q5TG53 156 aa13.53□□□□□ -0.24
CPNE1-204ENST00000397443 RAB37Q96AX2 223 aa13.53□□□□□ -0.24
CPNE1-204ENST00000397443 PANO1I0J062 215 aa13.52□□□□□ -0.24
CPNE1-204ENST00000397443 FAM19A5Q7Z5A7 132 aaPredicted RBP13.52□□□□□ -0.24
CPNE1-204ENST00000397443 DPH3Q96FX2 82 aa13.52□□□□□ -0.25
CPNE1-204ENST00000397443 PGPEP1Q9NXJ5 209 aa13.52□□□□□ -0.25
CPNE1-204ENST00000397443 H7C2G1 150 aa13.51□□□□□ -0.25
CPNE1-204ENST00000397443 PPDPFQ9H3Y8 114 aa13.51□□□□□ -0.25
CPNE1-204ENST00000397443 PKIGQ9Y2B9 76 aa13.51□□□□□ -0.25
CPNE1-204ENST00000397443 VPREB1P12018 145 aa13.5□□□□□ -0.25
CPNE1-204ENST00000397443 LINC00337Q8N6G1 96 aa13.5□□□□□ -0.25
CPNE1-204ENST00000397443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-204ENST00000397443 NDUFC2O95298 119 aa13.49□□□□□ -0.25
CPNE1-204ENST00000397443 OR13C6PQ8NH95 151 aa13.49□□□□□ -0.25
CPNE1-204ENST00000397443 A0A0B4J2C4 111 aa13.48□□□□□ -0.25
CPNE1-204ENST00000397443 A0A1B0GWB2 263 aa13.47□□□□□ -0.25
CPNE1-204ENST00000397443 A0A1W2PNN7 141 aa13.47□□□□□ -0.25
CPNE1-204ENST00000397443 KRTAP7-1Q8IUC3 87 aa13.47□□□□□ -0.25
CPNE1-204ENST00000397443 NKAPP1Q8N9T2 125 aa13.47□□□□□ -0.25
CPNE1-204ENST00000397443 GAGE10A6NGK3 116 aa13.47□□□□□ -0.25
CPNE1-204ENST00000397443 RPL13AP40429 203 aaKnown RBP13.47□□□□□ -0.25
CPNE1-204ENST00000397443 COL5A1-AS1Q5SY13 56 aa13.47□□□□□ -0.25
CPNE1-204ENST00000397443 PRO1854Q9UHT4 67 aa13.47□□□□□ -0.25
CPNE1-204ENST00000397443 NAA38Q9BRA0 125 aaKnown RBP13.45□□□□□ -0.26
CPNE1-204ENST00000397443 LINC00474Q9P2X8 69 aa13.45□□□□□ -0.26
CPNE1-204ENST00000397443 PKHD1P08F94 4074 aa13.44□□□□□ -0.26
CPNE1-204ENST00000397443 TRAV13-2A0A0B4J235 113 aa13.44□□□□□ -0.26
CPNE1-204ENST00000397443 A0A1B0GVY2 172 aa13.44□□□□□ -0.26
CPNE1-204ENST00000397443 S100A7L2Q5SY68 101 aa13.44□□□□□ -0.26
CPNE1-204ENST00000397443 SPACA4Q8TDM5 124 aa13.44□□□□□ -0.26
CPNE1-204ENST00000397443 KRTAP10-1P60331 282 aa13.43□□□□□ -0.26
CPNE1-204ENST00000397443 Q1RN00 199 aa13.43□□□□□ -0.26
CPNE1-204ENST00000397443 PLA2G2DQ9UNK4 145 aa13.43□□□□□ -0.26
CPNE1-204ENST00000397443 C22orf24Q9Y442 160 aa13.43□□□□□ -0.26
CPNE1-204ENST00000397443 M0QXV9 152 aa13.41□□□□□ -0.26
CPNE1-204ENST00000397443 M0R378 163 aa13.41□□□□□ -0.26
CPNE1-204ENST00000397443 TAX1BP3O14907 124 aa13.41□□□□□ -0.26
CPNE1-204ENST00000397443 TRBV10-3A0A0K0K1G6 114 aa13.41□□□□□ -0.26
CPNE1-204ENST00000397443 C7orf33Q8WU49 177 aa13.41□□□□□ -0.26
CPNE1-204ENST00000397443 FAM30AQ9NZY2 134 aa13.41□□□□□ -0.26
CPNE1-204ENST00000397443 A0A087WYN8 130 aa13.4□□□□□ -0.26
CPNE1-204ENST00000397443 TSPAN13O95857 204 aa13.4□□□□□ -0.26
CPNE1-204ENST00000397443 TRBV10-2A0A0K0K1G8 114 aa13.39□□□□□ -0.27
CPNE1-204ENST00000397443 RPL37AP8A6NKH3 93 aa13.39□□□□□ -0.27
CPNE1-204ENST00000397443 MRPL55Q7Z7F7 128 aaKnown RBP13.38□□□□□ -0.27
CPNE1-204ENST00000397443 TMEM126AQ9H061 195 aa13.38□□□□□ -0.27
CPNE1-204ENST00000397443 IGLV5-37A0A075B6J1 123 aa13.37□□□□□ -0.27
CPNE1-204ENST00000397443 HAMPP81172 84 aa13.37□□□□□ -0.27
CPNE1-204ENST00000397443 PHF5AQ7RTV0 110 aaKnown RBP13.37□□□□□ -0.27
CPNE1-204ENST00000397443 LINC00167Q96N53 147 aa13.37□□□□□ -0.27
CPNE1-204ENST00000397443 H3BUT2 72 aa13.36□□□□□ -0.27
CPNE1-204ENST00000397443 IGLV6-57P01721 117 aa13.36□□□□□ -0.27
CPNE1-204ENST00000397443 SMIM11BQ8TCY0 68 aa13.35□□□□□ -0.27
CPNE1-204ENST00000397443 PSMB2P49721 201 aa13.34□□□□□ -0.27
CPNE1-204ENST00000397443 C9orf118A6NHY6 69 aa13.33□□□□□ -0.28
CPNE1-204ENST00000397443 LBHQ53QV2 105 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-204ENST00000397443 UBE2BP63146 152 aa13.31□□□□□ -0.28
CPNE1-204ENST00000397443 TRAV23DV6A0A075B6W5 121 aa13.31□□□□□ -0.28
CPNE1-204ENST00000397443 PLAC8Q9NZF1 115 aa13.31□□□□□ -0.28
CPNE1-204ENST00000397443 TRIAP1O43715 76 aa13.3□□□□□ -0.28
CPNE1-204ENST00000397443 LRP1BQ9NZR2 4599 aa13.3□□□□□ -0.28
CPNE1-204ENST00000397443 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
CPNE1-204ENST00000397443 IGLV1-50A0A075B6I6 118 aa13.29□□□□□ -0.28
CPNE1-204ENST00000397443 Q6ZSA8 131 aa13.29□□□□□ -0.28
CPNE1-204ENST00000397443 CIRBP-AS1Q8TBR5 109 aa13.29□□□□□ -0.28
CPNE1-204ENST00000397443 DYNC1H1Q14204 4646 aaKnown RBP13.29□□□□□ -0.28
CPNE1-204ENST00000397443 SCXQ7RTU7 201 aa13.29□□□□□ -0.28
CPNE1-204ENST00000397443 SCGB1C2P0DMR2 95 aa13.27□□□□□ -0.28
CPNE1-204ENST00000397443 C6orf99Q4VX62 202 aa13.27□□□□□ -0.28
CPNE1-204ENST00000397443 KRTAP11-1Q8IUC1 163 aa13.27□□□□□ -0.28
CPNE1-204ENST00000397443 RPL28P46779 137 aaKnown RBP13.27□□□□□ -0.29
CPNE1-204ENST00000397443 ZNF73O43830 326 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms