RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
ITGB1-202ENST00000396033 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
ITGB1-202ENST00000396033 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
ITGB1-202ENST00000396033 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
ITGB1-202ENST00000396033 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
ITGB1-202ENST00000396033 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
ITGB1-202ENST00000396033 C1orf43Q9BWL3 253 aa8.13□□□□□ -1.11
ITGB1-202ENST00000396033 KRTAP26-1Q6PEX3 210 aa8.13□□□□□ -1.11
ITGB1-202ENST00000396033 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
ITGB1-202ENST00000396033 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
ITGB1-202ENST00000396033 SMIM11BQ8TCY0 68 aa8.13□□□□□ -1.11
ITGB1-202ENST00000396033 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
ITGB1-202ENST00000396033 IGKV2D-24A0A075B6R9 120 aa8.12□□□□□ -1.11
ITGB1-202ENST00000396033 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
ITGB1-202ENST00000396033 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
ITGB1-202ENST00000396033 OXTP01178 125 aa8.12□□□□□ -1.11
ITGB1-202ENST00000396033 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
ITGB1-202ENST00000396033 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
ITGB1-202ENST00000396033 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
ITGB1-202ENST00000396033 H3BT86 120 aa8.11□□□□□ -1.11
ITGB1-202ENST00000396033 FAM240AA0A1B0GVK7 77 aa8.1□□□□□ -1.11
ITGB1-202ENST00000396033 NDUFC2O95298 119 aa8.1□□□□□ -1.11
ITGB1-202ENST00000396033 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
ITGB1-202ENST00000396033 Q9HAA7 133 aa8.1□□□□□ -1.11
ITGB1-202ENST00000396033 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
ITGB1-202ENST00000396033 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-202ENST00000396033 MUC7Q8TAX7 377 aa8.1□□□□□ -1.11
ITGB1-202ENST00000396033 FAM218AQ96MZ4 157 aa8.1□□□□□ -1.11
ITGB1-202ENST00000396033 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
ITGB1-202ENST00000396033 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
ITGB1-202ENST00000396033 TRACP01848 142 aa8.08□□□□□ -1.12
ITGB1-202ENST00000396033 DNAH9Q9NYC9 4486 aa8.08□□□□□ -1.12
ITGB1-202ENST00000396033 NCR3O14931 201 aa8.08□□□□□ -1.12
ITGB1-202ENST00000396033 Q8NDZ9 215 aa8.07□□□□□ -1.12
ITGB1-202ENST00000396033 H0YGX0 51 aa8.06□□□□□ -1.12
ITGB1-202ENST00000396033 Q6ZRU5 148 aa8.06□□□□□ -1.12
ITGB1-202ENST00000396033 TMEM126AQ9H061 195 aa8.06□□□□□ -1.12
ITGB1-202ENST00000396033 A0A087WYN8 130 aa8.05□□□□□ -1.12
ITGB1-202ENST00000396033 B9D2Q9BPU9 175 aa8.05□□□□□ -1.12
ITGB1-202ENST00000396033 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
ITGB1-202ENST00000396033 STAB2Q8WWQ8 2551 aa8.05□□□□□ -1.12
ITGB1-202ENST00000396033 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
ITGB1-202ENST00000396033 FAM19A5Q7Z5A7 132 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-202ENST00000396033 C3orf22Q8N5N4 141 aa8.05□□□□□ -1.12
ITGB1-202ENST00000396033 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
ITGB1-202ENST00000396033 DNAL4O96015 105 aa8.04□□□□□ -1.12
ITGB1-202ENST00000396033 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
ITGB1-202ENST00000396033 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
ITGB1-202ENST00000396033 BAALC-AS2P0C853 105 aa8.03□□□□□ -1.12
ITGB1-202ENST00000396033 RPL18AQ02543 176 aaKnown RBP8.02□□□□□ -1.13
ITGB1-202ENST00000396033 LECT2O14960 151 aa8.02□□□□□ -1.13
ITGB1-202ENST00000396033 DNAH1Q9P2D7 4330 aa8.02□□□□□ -1.13
ITGB1-202ENST00000396033 RMI2Q96E14 147 aa8.01□□□□□ -1.13
ITGB1-202ENST00000396033 F8WDY8 70 aa8.01□□□□□ -1.13
ITGB1-202ENST00000396033 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
ITGB1-202ENST00000396033 NDUFC2-KCTD14E9PQ53 114 aa8□□□□□ -1.13
ITGB1-202ENST00000396033 C9orf153Q5TBE3 101 aa8□□□□□ -1.13
ITGB1-202ENST00000396033 CASC10Q5T4H9 136 aa7.99□□□□□ -1.13
ITGB1-202ENST00000396033 C6orf99Q4VX62 202 aa7.99□□□□□ -1.13
ITGB1-202ENST00000396033 USP17L23D6RBM5 183 aa7.98□□□□□ -1.13
ITGB1-202ENST00000396033 IGLV6-57P01721 117 aa7.98□□□□□ -1.13
ITGB1-202ENST00000396033 IMUPQ9GZP8 106 aa7.98□□□□□ -1.13
ITGB1-202ENST00000396033 UQCRQO14949 82 aa7.98□□□□□ -1.13
ITGB1-202ENST00000396033 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
ITGB1-202ENST00000396033 hADV29S1A0JD25 119 aa7.98□□□□□ -1.13
ITGB1-202ENST00000396033 Q6ZRP5 223 aa7.97□□□□□ -1.13
ITGB1-202ENST00000396033 A0A087WVE0 104 aa7.97□□□□□ -1.13
ITGB1-202ENST00000396033 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
ITGB1-202ENST00000396033 SLPIP03973 132 aa7.97□□□□□ -1.13
ITGB1-202ENST00000396033 APLNQ9ULZ1 77 aa7.97□□□□□ -1.13
ITGB1-202ENST00000396033 CRYGAP11844 174 aa7.96□□□□□ -1.13
ITGB1-202ENST00000396033 VPREB1P12018 145 aa7.96□□□□□ -1.13
ITGB1-202ENST00000396033 DYNC2H1Q8NCM8 4307 aaKnown RBP7.96□□□□□ -1.13
ITGB1-202ENST00000396033 COX7CP15954 63 aa7.96□□□□□ -1.14
ITGB1-202ENST00000396033 Q5XG85 94 aa7.96□□□□□ -1.14
ITGB1-202ENST00000396033 LYSTQ99698 3801 aa7.96□□□□□ -1.14
ITGB1-202ENST00000396033 LINC00643Q86TS7 51 aa7.96□□□□□ -1.14
ITGB1-202ENST00000396033 A0A1B0GX51 115 aa7.95□□□□□ -1.14
ITGB1-202ENST00000396033 Q8N814 137 aa7.95□□□□□ -1.14
ITGB1-202ENST00000396033 ORMDL1Q9P0S3 153 aa7.95□□□□□ -1.14
ITGB1-202ENST00000396033 TRAV23DV6A0A075B6W5 121 aa7.95□□□□□ -1.14
ITGB1-202ENST00000396033 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
ITGB1-202ENST00000396033 KRTAP1-5Q9BYS1 174 aa7.94□□□□□ -1.14
ITGB1-202ENST00000396033 M0R378 163 aa7.93□□□□□ -1.14
ITGB1-202ENST00000396033 LINC00167Q96N53 147 aa7.93□□□□□ -1.14
ITGB1-202ENST00000396033 DPH3Q96FX2 82 aa7.93□□□□□ -1.14
ITGB1-202ENST00000396033 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
ITGB1-202ENST00000396033 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
ITGB1-202ENST00000396033 DSCR8Q96T75 97 aa7.93□□□□□ -1.14
ITGB1-202ENST00000396033 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
ITGB1-202ENST00000396033 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
ITGB1-202ENST00000396033 NUPR2A6NF83 97 aa7.92□□□□□ -1.14
ITGB1-202ENST00000396033 LINC00846Q9NV44 126 aa7.92□□□□□ -1.14
ITGB1-202ENST00000396033 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
ITGB1-202ENST00000396033 ZNF73O43830 326 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-202ENST00000396033 ACYP1P07311 99 aa7.91□□□□□ -1.14
ITGB1-202ENST00000396033 DNHD1Q96M86 4753 aa7.91□□□□□ -1.14
ITGB1-202ENST00000396033 PRKDCP78527 4128 aaKnown RBP7.9□□□□□ -1.14
ITGB1-202ENST00000396033 J3KT08 172 aa7.9□□□□□ -1.14
ITGB1-202ENST00000396033 CSMD3Q7Z407 3707 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms