RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 X6R8D5 127 aa11.96□□□□□ -0.5
UBFD1-201ENST00000395878 PKD1L2Q7Z442 2459 aa11.96□□□□□ -0.5
UBFD1-201ENST00000395878 BCE1O60756 84 aa11.95□□□□□ -0.5
UBFD1-201ENST00000395878 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
UBFD1-201ENST00000395878 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
UBFD1-201ENST00000395878 FSHBP01225 129 aa11.94□□□□□ -0.5
UBFD1-201ENST00000395878 FAM218AQ96MZ4 157 aa11.94□□□□□ -0.5
UBFD1-201ENST00000395878 ELOF1P60002 83 aaKnown RBP11.93□□□□□ -0.5
UBFD1-201ENST00000395878 SPINK1P00995 79 aa11.93□□□□□ -0.5
UBFD1-201ENST00000395878 KLK9Q2XQG4 91 aa11.92□□□□□ -0.5
UBFD1-201ENST00000395878 Q9UF83 564 aa11.92□□□□□ -0.5
UBFD1-201ENST00000395878 PTPRBP23467 1997 aa11.91□□□□□ -0.5
UBFD1-201ENST00000395878 MDFIQ99750 246 aa11.91□□□□□ -0.5
UBFD1-201ENST00000395878 CRYGAP11844 174 aa11.9□□□□□ -0.5
UBFD1-201ENST00000395878 COL4A2P08572 1712 aa11.9□□□□□ -0.51
UBFD1-201ENST00000395878 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
UBFD1-201ENST00000395878 LOC110117498A0A087WWA1 95 aa11.87□□□□□ -0.51
UBFD1-201ENST00000395878 Q6ZQT0 140 aa11.87□□□□□ -0.51
UBFD1-201ENST00000395878 Q6ZRX8 168 aa11.85□□□□□ -0.51
UBFD1-201ENST00000395878 Q8NBF4 154 aa11.84□□□□□ -0.51
UBFD1-201ENST00000395878 MOBPQ13875 183 aa11.84□□□□□ -0.51
UBFD1-201ENST00000395878 IGKV2D-30A0A075B6S6 120 aa11.83□□□□□ -0.52
UBFD1-201ENST00000395878 IGKV2-30P06310 120 aa11.83□□□□□ -0.52
UBFD1-201ENST00000395878 ZNF462Q96JM2 2506 aa11.83□□□□□ -0.52
UBFD1-201ENST00000395878 COL27A1Q8IZC6 1860 aaPredicted RBP11.82□□□□□ -0.52
UBFD1-201ENST00000395878 Q8NAQ8 132 aa11.82□□□□□ -0.52
UBFD1-201ENST00000395878 MTORP42345 2549 aa11.82□□□□□ -0.52
UBFD1-201ENST00000395878 CENPFP49454 3210 aa11.81□□□□□ -0.52
UBFD1-201ENST00000395878 LINC00476Q8WZB0 136 aa11.81□□□□□ -0.52
UBFD1-201ENST00000395878 GVQW2A0A096LPI5 108 aaPredicted RBP11.8□□□□□ -0.52
UBFD1-201ENST00000395878 CHD8Q9HCK8 2581 aa11.79□□□□□ -0.52
UBFD1-201ENST00000395878 H3BPC8 53 aa11.79□□□□□ -0.52
UBFD1-201ENST00000395878 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
UBFD1-201ENST00000395878 LITAFQ99732 161 aa11.79□□□□□ -0.52
UBFD1-201ENST00000395878 MUC4Q99102 2169 aa11.77□□□□□ -0.52
UBFD1-201ENST00000395878 C16orf90A8MZG2 172 aa11.77□□□□□ -0.52
UBFD1-201ENST00000395878 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.52
UBFD1-201ENST00000395878 SPACA4Q8TDM5 124 aa11.77□□□□□ -0.52
UBFD1-201ENST00000395878 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
UBFD1-201ENST00000395878 ACYP2P14621 99 aa11.76□□□□□ -0.53
UBFD1-201ENST00000395878 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
UBFD1-201ENST00000395878 EPM2AB3EWF7 344 aa11.75□□□□□ -0.53
UBFD1-201ENST00000395878 RPS28P62857 69 aaKnown RBP11.75□□□□□ -0.53
UBFD1-201ENST00000395878 LINC00588Q9Y4M8 146 aa11.75□□□□□ -0.53
UBFD1-201ENST00000395878 NBDYA0A0U1RRE5 68 aa11.74□□□□□ -0.53
UBFD1-201ENST00000395878 C4orf26Q17RF5 130 aa11.73□□□□□ -0.53
UBFD1-201ENST00000395878 A0A1B0GU69 56 aa11.73□□□□□ -0.53
UBFD1-201ENST00000395878 PRO0628Q9UI54 55 aa11.73□□□□□ -0.53
UBFD1-201ENST00000395878 ST20-AS1Q8NBB2 130 aa11.73□□□□□ -0.53
UBFD1-201ENST00000395878 RTL8CO15255 209 aa11.71□□□□□ -0.53
UBFD1-201ENST00000395878 IGLV6-57P01721 117 aa11.71□□□□□ -0.53
UBFD1-201ENST00000395878 VPREB1P12018 145 aa11.7□□□□□ -0.54
UBFD1-201ENST00000395878 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
UBFD1-201ENST00000395878 Q6ZRP5 223 aa11.69□□□□□ -0.54
UBFD1-201ENST00000395878 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
UBFD1-201ENST00000395878 TRBV7-4A0A0J9YYF1 115 aa11.68□□□□□ -0.54
UBFD1-201ENST00000395878 TM2D3Q9BRN9 247 aa11.68□□□□□ -0.54
UBFD1-201ENST00000395878 ANKRD17O75179 2603 aaKnown RBP11.67□□□□□ -0.54
UBFD1-201ENST00000395878 POLQO75417 2590 aa11.67□□□□□ -0.54
UBFD1-201ENST00000395878 LINC00313P59037 77 aa11.66□□□□□ -0.54
UBFD1-201ENST00000395878 PCSK5Q92824 1860 aa11.65□□□□□ -0.54
UBFD1-201ENST00000395878 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
UBFD1-201ENST00000395878 CHTF8P0CG12 524 aa11.63□□□□□ -0.55
UBFD1-201ENST00000395878 SPAG11AQ6PDA7 123 aa11.62□□□□□ -0.55
UBFD1-201ENST00000395878 RPL37AP61513 92 aaKnown RBP11.62□□□□□ -0.55
UBFD1-201ENST00000395878 TYMSOSQ8TAI1 123 aa11.61□□□□□ -0.55
UBFD1-201ENST00000395878 ACANP16112 2415 aa11.61□□□□□ -0.55
UBFD1-201ENST00000395878 FASNP49327 2511 aaKnown RBP11.6□□□□□ -0.55
UBFD1-201ENST00000395878 KCNQ1DNQ9H478 68 aa11.59□□□□□ -0.55
UBFD1-201ENST00000395878 A8MWP4 228 aa11.59□□□□□ -0.55
UBFD1-201ENST00000395878 IGLV1-50A0A075B6I6 118 aa11.59□□□□□ -0.55
UBFD1-201ENST00000395878 LOC101927531A0A1B0GV80 90 aa11.58□□□□□ -0.56
UBFD1-201ENST00000395878 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
UBFD1-201ENST00000395878 ERC2-IT1O76042 136 aa11.57□□□□□ -0.56
UBFD1-201ENST00000395878 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
UBFD1-201ENST00000395878 GOLGB1Q14789 3259 aaKnown RBP11.57□□□□□ -0.56
UBFD1-201ENST00000395878 C8orf87E5RJ46 101 aa11.57□□□□□ -0.56
UBFD1-201ENST00000395878 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
UBFD1-201ENST00000395878 FAM229AH3BQW9 127 aa11.56□□□□□ -0.56
UBFD1-201ENST00000395878 PRR34Q9NV39 138 aa11.55□□□□□ -0.56
UBFD1-201ENST00000395878 K7EQZ3 153 aa11.54□□□□□ -0.56
UBFD1-201ENST00000395878 EIF4EBP3O60516 100 aaPredicted RBP11.52□□□□□ -0.57
UBFD1-201ENST00000395878 MRPL34Q9BQ48 92 aaKnown RBP11.52□□□□□ -0.57
UBFD1-201ENST00000395878 ATP11AUNQ6ZP68 121 aa11.5□□□□□ -0.57
UBFD1-201ENST00000395878 F8P00451 2351 aa11.5□□□□□ -0.57
UBFD1-201ENST00000395878 Q96NJ1 140 aa11.49□□□□□ -0.57
UBFD1-201ENST00000395878 A0A096LNT2 108 aa11.48□□□□□ -0.57
UBFD1-201ENST00000395878 LINC00612Q8N6U2 182 aa11.48□□□□□ -0.57
UBFD1-201ENST00000395878 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
UBFD1-201ENST00000395878 WWC2-AS2Q96NR7 200 aa11.48□□□□□ -0.57
UBFD1-201ENST00000395878 GIG44P09565 113 aaPredicted RBP11.47□□□□□ -0.57
UBFD1-201ENST00000395878 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
UBFD1-201ENST00000395878 IGFL1Q6UW32 110 aa11.46□□□□□ -0.57
UBFD1-201ENST00000395878 KRTAP10-11P60412 298 aa11.43□□□□□ -0.58
UBFD1-201ENST00000395878 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
UBFD1-201ENST00000395878 COA5Q86WW8 74 aa11.42□□□□□ -0.58
UBFD1-201ENST00000395878 PRR15Q8IV56 129 aa11.42□□□□□ -0.58
UBFD1-201ENST00000395878 C9orf129Q5T035 196 aaKnown RBP11.41□□□□□ -0.58
UBFD1-201ENST00000395878 K7EIL1 84 aa11.41□□□□□ -0.58
UBFD1-201ENST00000395878 TLX1NBP0CAT3 122 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms