RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 F8P00451 2351 aa11.98□□□□□ -0.49
SIN3A-203ENST00000394949 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
SIN3A-203ENST00000394949 LYPD5Q6UWN5 251 aa11.97□□□□□ -0.49
SIN3A-203ENST00000394949 Q6ZRU5 148 aa11.97□□□□□ -0.49
SIN3A-203ENST00000394949 SMIM29Q86T20 159 aa11.96□□□□□ -0.49
SIN3A-203ENST00000394949 PCOTHQ58A44 107 aa11.94□□□□□ -0.5
SIN3A-203ENST00000394949 FHL3Q13643 280 aa11.93□□□□□ -0.5
SIN3A-203ENST00000394949 C1orf64Q8NEQ6 169 aa11.92□□□□□ -0.5
SIN3A-203ENST00000394949 IGHV6-1A0A0B4J1U7 121 aa11.92□□□□□ -0.5
SIN3A-203ENST00000394949 KIAA0087Q14695 138 aa11.92□□□□□ -0.5
SIN3A-203ENST00000394949 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
SIN3A-203ENST00000394949 SMCR5Q8TEV8 140 aa11.91□□□□□ -0.5
SIN3A-203ENST00000394949 NHLRC4P0CG21 123 aaPredicted RBP11.91□□□□□ -0.5
SIN3A-203ENST00000394949 MUC4Q99102 2169 aa11.9□□□□□ -0.5
SIN3A-203ENST00000394949 PTPRBP23467 1997 aa11.9□□□□□ -0.5
SIN3A-203ENST00000394949 H3BPC8 53 aa11.9□□□□□ -0.5
SIN3A-203ENST00000394949 ERC2-IT1O76042 136 aa11.87□□□□□ -0.51
SIN3A-203ENST00000394949 DEFB116Q30KQ4 102 aa11.87□□□□□ -0.51
SIN3A-203ENST00000394949 Q9UF83 564 aa11.87□□□□□ -0.51
SIN3A-203ENST00000394949 IGLV5-52A0A0A0MRZ9 124 aa11.86□□□□□ -0.51
SIN3A-203ENST00000394949 TP53AIP1Q9HCN2 124 aa11.85□□□□□ -0.51
SIN3A-203ENST00000394949 C6orf48Q9UBA6 75 aa11.85□□□□□ -0.51
SIN3A-203ENST00000394949 C22orf24Q9Y442 160 aa11.85□□□□□ -0.51
SIN3A-203ENST00000394949 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
SIN3A-203ENST00000394949 TM2D3Q9BRN9 247 aa11.85□□□□□ -0.51
SIN3A-203ENST00000394949 Q8NBF4 154 aa11.84□□□□□ -0.51
SIN3A-203ENST00000394949 FLNBO75369 2602 aaKnown RBP11.83□□□□□ -0.52
SIN3A-203ENST00000394949 C1orf134Q5TEV5 83 aa11.81□□□□□ -0.52
SIN3A-203ENST00000394949 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
SIN3A-203ENST00000394949 COL4A2P08572 1712 aa11.8□□□□□ -0.52
SIN3A-203ENST00000394949 LINC01556Q5JQF7 62 aa11.79□□□□□ -0.52
SIN3A-203ENST00000394949 PRLHP81277 87 aa11.79□□□□□ -0.52
SIN3A-203ENST00000394949 GVQW2A0A096LPI5 108 aaPredicted RBP11.77□□□□□ -0.53
SIN3A-203ENST00000394949 KLKP1Q107X0 134 aa11.77□□□□□ -0.53
SIN3A-203ENST00000394949 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
SIN3A-203ENST00000394949 Q6ZRX8 168 aa11.75□□□□□ -0.53
SIN3A-203ENST00000394949 H3BNG1 76 aa11.75□□□□□ -0.53
SIN3A-203ENST00000394949 IGLV6-57P01721 117 aa11.74□□□□□ -0.53
SIN3A-203ENST00000394949 X6R8D5 127 aa11.7□□□□□ -0.54
SIN3A-203ENST00000394949 ACYP2P14621 99 aa11.7□□□□□ -0.54
SIN3A-203ENST00000394949 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
SIN3A-203ENST00000394949 LINC00476Q8WZB0 136 aa11.7□□□□□ -0.54
SIN3A-203ENST00000394949 EIF4EBP3O60516 100 aaPredicted RBP11.69□□□□□ -0.54
SIN3A-203ENST00000394949 COL27A1Q8IZC6 1860 aaPredicted RBP11.69□□□□□ -0.54
SIN3A-203ENST00000394949 TRBV7-4A0A0J9YYF1 115 aa11.69□□□□□ -0.54
SIN3A-203ENST00000394949 A0A1B0GU69 56 aa11.69□□□□□ -0.54
SIN3A-203ENST00000394949 FSHBP01225 129 aa11.68□□□□□ -0.54
SIN3A-203ENST00000394949 LINC01600Q96MT4 127 aa11.67□□□□□ -0.54
SIN3A-203ENST00000394949 USP24Q9UPU5 2620 aa11.66□□□□□ -0.54
SIN3A-203ENST00000394949 CYP4F30PQ9H0H9 118 aa11.66□□□□□ -0.54
SIN3A-203ENST00000394949 VPREB1P12018 145 aa11.65□□□□□ -0.54
SIN3A-203ENST00000394949 SPAG11AQ6PDA7 123 aa11.64□□□□□ -0.55
SIN3A-203ENST00000394949 H7BZZ5 65 aa11.63□□□□□ -0.55
SIN3A-203ENST00000394949 SPINK1P00995 79 aa11.62□□□□□ -0.55
SIN3A-203ENST00000394949 MDFIQ99750 246 aa11.62□□□□□ -0.55
SIN3A-203ENST00000394949 RETNLBQ9BQ08 111 aa11.61□□□□□ -0.55
SIN3A-203ENST00000394949 MGAM2Q2M2H8 2515 aa11.6□□□□□ -0.55
SIN3A-203ENST00000394949 KRTAP24-1Q3LI83 254 aa11.59□□□□□ -0.55
SIN3A-203ENST00000394949 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
SIN3A-203ENST00000394949 LINC00528Q8N1L1 170 aa11.58□□□□□ -0.56
SIN3A-203ENST00000394949 PCSK5Q92824 1860 aa11.58□□□□□ -0.56
SIN3A-203ENST00000394949 ST20-AS1Q8NBB2 130 aa11.57□□□□□ -0.56
SIN3A-203ENST00000394949 MOBPQ13875 183 aa11.57□□□□□ -0.56
SIN3A-203ENST00000394949 A8MUN3 132 aa11.57□□□□□ -0.56
SIN3A-203ENST00000394949 K7EQZ3 153 aa11.55□□□□□ -0.56
SIN3A-203ENST00000394949 KCNQ1DNQ9H478 68 aa11.55□□□□□ -0.56
SIN3A-203ENST00000394949 C8orf87E5RJ46 101 aa11.55□□□□□ -0.56
SIN3A-203ENST00000394949 A8MWP4 228 aa11.55□□□□□ -0.56
SIN3A-203ENST00000394949 Q8NAQ8 132 aa11.54□□□□□ -0.56
SIN3A-203ENST00000394949 Q6ZRP5 223 aa11.54□□□□□ -0.56
SIN3A-203ENST00000394949 IGKV2D-30A0A075B6S6 120 aa11.53□□□□□ -0.56
SIN3A-203ENST00000394949 LOC101927531A0A1B0GV80 90 aa11.53□□□□□ -0.56
SIN3A-203ENST00000394949 IGKV2-30P06310 120 aa11.53□□□□□ -0.56
SIN3A-203ENST00000394949 HECTD1Q9ULT8 2610 aa11.53□□□□□ -0.56
SIN3A-203ENST00000394949 C7orf65Q6ZTY9 151 aa11.52□□□□□ -0.56
SIN3A-203ENST00000394949 PRRC2CQ9Y520 2896 aaKnown RBP11.52□□□□□ -0.57
SIN3A-203ENST00000394949 C16orf90A8MZG2 172 aa11.51□□□□□ -0.57
SIN3A-203ENST00000394949 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
SIN3A-203ENST00000394949 COA5Q86WW8 74 aa11.51□□□□□ -0.57
SIN3A-203ENST00000394949 EPM2AB3EWF7 344 aa11.5□□□□□ -0.57
SIN3A-203ENST00000394949 ATP11AUNQ6ZP68 121 aa11.5□□□□□ -0.57
SIN3A-203ENST00000394949 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
SIN3A-203ENST00000394949 CSNK1G2-AS1Q8NCQ2 148 aa11.48□□□□□ -0.57
SIN3A-203ENST00000394949 OBSCN-AS1Q96MR7 158 aa11.48□□□□□ -0.57
SIN3A-203ENST00000394949 NBDYA0A0U1RRE5 68 aa11.47□□□□□ -0.57
SIN3A-203ENST00000394949 IGLV1-50A0A075B6I6 118 aa11.46□□□□□ -0.57
SIN3A-203ENST00000394949 WIPF1O43516 503 aa11.46□□□□□ -0.57
SIN3A-203ENST00000394949 CD164Q04900 197 aa11.46□□□□□ -0.57
SIN3A-203ENST00000394949 PRR34Q9NV39 138 aa11.46□□□□□ -0.57
SIN3A-203ENST00000394949 MAST4O15021 2626 aa11.46□□□□□ -0.57
SIN3A-203ENST00000394949 LINC00588Q9Y4M8 146 aa11.45□□□□□ -0.58
SIN3A-203ENST00000394949 C9orf129Q5T035 196 aaKnown RBP11.44□□□□□ -0.58
SIN3A-203ENST00000394949 PHF5AQ7RTV0 110 aaKnown RBP11.44□□□□□ -0.58
SIN3A-203ENST00000394949 DNAH10OSP0CZ25 163 aa11.43□□□□□ -0.58
SIN3A-203ENST00000394949 ATRQ13535 2644 aa11.43□□□□□ -0.58
SIN3A-203ENST00000394949 PRR15Q8IV56 129 aa11.42□□□□□ -0.58
SIN3A-203ENST00000394949 MRPL34Q9BQ48 92 aaKnown RBP11.41□□□□□ -0.58
SIN3A-203ENST00000394949 Q8N377 158 aa11.41□□□□□ -0.58
SIN3A-203ENST00000394949 ZNF575Q86XF7 245 aa11.4□□□□□ -0.58
SIN3A-203ENST00000394949 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms