RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 J3KT08 172 aa13.3□□□□□ -0.28
RCCD1-201ENST00000394258 Q8NDZ9 215 aa13.3□□□□□ -0.28
RCCD1-201ENST00000394258 NANOS2P60321 138 aaKnown RBP13.3□□□□□ -0.28
RCCD1-201ENST00000394258 C10orf25Q5T742 122 aa13.29□□□□□ -0.28
RCCD1-201ENST00000394258 LELP1Q5T871 98 aa13.29□□□□□ -0.28
RCCD1-201ENST00000394258 UNQ6190/PRO20217Q6UXQ8 127 aa13.28□□□□□ -0.28
RCCD1-201ENST00000394258 LINC01561Q8N1V8 128 aa13.28□□□□□ -0.28
RCCD1-201ENST00000394258 ATOX1O00244 68 aa13.27□□□□□ -0.29
RCCD1-201ENST00000394258 CRYGAP11844 174 aa13.27□□□□□ -0.29
RCCD1-201ENST00000394258 DSCR8Q96T75 97 aa13.26□□□□□ -0.29
RCCD1-201ENST00000394258 HIST1H4AP62805 103 aaKnown RBP13.26□□□□□ -0.29
RCCD1-201ENST00000394258 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
RCCD1-201ENST00000394258 SPAG11BQ08648 103 aa13.26□□□□□ -0.29
RCCD1-201ENST00000394258 TENM3Q9P273 2699 aa13.24□□□□□ -0.29
RCCD1-201ENST00000394258 LYPD5Q6UWN5 251 aa13.24□□□□□ -0.29
RCCD1-201ENST00000394258 ENHOQ6UWT2 76 aa13.24□□□□□ -0.29
RCCD1-201ENST00000394258 CYSRT1A8MQ03 144 aa13.23□□□□□ -0.29
RCCD1-201ENST00000394258 KRTAP10-11P60412 298 aa13.23□□□□□ -0.29
RCCD1-201ENST00000394258 COX17Q14061 63 aa13.23□□□□□ -0.29
RCCD1-201ENST00000394258 OXTP01178 125 aa13.21□□□□□ -0.3
RCCD1-201ENST00000394258 OBSCN-AS1Q96MR7 158 aa13.21□□□□□ -0.3
RCCD1-201ENST00000394258 MAST4O15021 2626 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 WIPF1O43516 503 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 ORMDL1Q9P0S3 153 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 USP17L23D6RBM5 183 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 WFDC10BQ8IUB3 73 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 DPH3Q96FX2 82 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 PRR34Q9NV39 138 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 FBN1P35555 2871 aaKnown RBP13.2□□□□□ -0.3
RCCD1-201ENST00000394258 NOTCH1P46531 2555 aa13.2□□□□□ -0.3
RCCD1-201ENST00000394258 NDUFC2O95298 119 aa13.18□□□□□ -0.3
RCCD1-201ENST00000394258 S100A7L2Q5SY68 101 aa13.18□□□□□ -0.3
RCCD1-201ENST00000394258 Q6ZTC4 211 aa13.18□□□□□ -0.3
RCCD1-201ENST00000394258 C6orf99Q4VX62 202 aa13.18□□□□□ -0.3
RCCD1-201ENST00000394258 KPRPQ5T749 579 aaPredicted RBP13.18□□□□□ -0.3
RCCD1-201ENST00000394258 SERP2Q8N6R1 65 aa13.18□□□□□ -0.3
RCCD1-201ENST00000394258 Q8N814 137 aa13.18□□□□□ -0.3
RCCD1-201ENST00000394258 ANK2Q01484 3957 aa13.18□□□□□ -0.3
RCCD1-201ENST00000394258 UPK3BQ9BT76 320 aa13.16□□□□□ -0.3
RCCD1-201ENST00000394258 C4orf26Q17RF5 130 aa13.16□□□□□ -0.3
RCCD1-201ENST00000394258 Q6JHZ5 121 aa13.15□□□□□ -0.3
RCCD1-201ENST00000394258 XAGE1AQ9HD64 81 aa13.15□□□□□ -0.3
RCCD1-201ENST00000394258 HIGD2BQ4VC39 106 aa13.15□□□□□ -0.31
RCCD1-201ENST00000394258 TRAV23DV6A0A075B6W5 121 aa13.14□□□□□ -0.31
RCCD1-201ENST00000394258 RPS28P62857 69 aaKnown RBP13.13□□□□□ -0.31
RCCD1-201ENST00000394258 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
RCCD1-201ENST00000394258 FAM19A1Q7Z5A9 133 aa13.12□□□□□ -0.31
RCCD1-201ENST00000394258 KRTAP24-1Q3LI83 254 aa13.12□□□□□ -0.31
RCCD1-201ENST00000394258 C6orf48Q9UBA6 75 aa13.12□□□□□ -0.31
RCCD1-201ENST00000394258 A0A0J9YWU9 116 aa13.11□□□□□ -0.31
RCCD1-201ENST00000394258 HRCT1Q6UXD1 115 aa13.1□□□□□ -0.31
RCCD1-201ENST00000394258 TMEM258P61165 79 aa13.09□□□□□ -0.31
RCCD1-201ENST00000394258 ESRGQ1W209 222 aa13.08□□□□□ -0.31
RCCD1-201ENST00000394258 ZNF561-AS1K7EIQ3 104 aa13.07□□□□□ -0.32
RCCD1-201ENST00000394258 GHRHP01286 108 aa13.07□□□□□ -0.32
RCCD1-201ENST00000394258 CCKP06307 115 aa13.06□□□□□ -0.32
RCCD1-201ENST00000394258 LINC00575Q6W349 94 aa13.06□□□□□ -0.32
RCCD1-201ENST00000394258 TMEM256-PLSCR3K7ERE1 68 aa13.06□□□□□ -0.32
RCCD1-201ENST00000394258 CAMK2N2Q96S95 79 aa13.06□□□□□ -0.32
RCCD1-201ENST00000394258 COL6A5A8TX70 2615 aa13.05□□□□□ -0.32
RCCD1-201ENST00000394258 TRBV10-3A0A0K0K1G6 114 aa13.04□□□□□ -0.32
RCCD1-201ENST00000394258 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
RCCD1-201ENST00000394258 DEFB131BA0A096LNP1 70 aa13.02□□□□□ -0.32
RCCD1-201ENST00000394258 IGLV6-57P01721 117 aa13.02□□□□□ -0.32
RCCD1-201ENST00000394258 PRB2P02812 416 aaPredicted RBP13.02□□□□□ -0.32
RCCD1-201ENST00000394258 JMJD7-PLA2G4BH0Y9G9 81 aa13.02□□□□□ -0.33
RCCD1-201ENST00000394258 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
RCCD1-201ENST00000394258 H3BNG1 76 aa13.01□□□□□ -0.33
RCCD1-201ENST00000394258 EGFEM1PQ0D2K5 195 aa13.01□□□□□ -0.33
RCCD1-201ENST00000394258 KRTAP26-1Q6PEX3 210 aa13.01□□□□□ -0.33
RCCD1-201ENST00000394258 Q5XG85 94 aa13.01□□□□□ -0.33
RCCD1-201ENST00000394258 Q6ZRU5 148 aa13.01□□□□□ -0.33
RCCD1-201ENST00000394258 C11orf45Q8TAV5 145 aa13.01□□□□□ -0.33
RCCD1-201ENST00000394258 IGKV2D-24A0A075B6R9 120 aa12.99□□□□□ -0.33
RCCD1-201ENST00000394258 C15orf56Q8N910 161 aa12.99□□□□□ -0.33
RCCD1-201ENST00000394258 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
RCCD1-201ENST00000394258 NBEAL1Q6ZS30 2694 aa12.99□□□□□ -0.33
RCCD1-201ENST00000394258 M0R2N4 97 aa12.98□□□□□ -0.33
RCCD1-201ENST00000394258 C1orf43Q9BWL3 253 aa12.98□□□□□ -0.33
RCCD1-201ENST00000394258 Q6ZQY7 126 aa12.97□□□□□ -0.33
RCCD1-201ENST00000394258 CMYA5Q8N3K9 4069 aa12.97□□□□□ -0.33
RCCD1-201ENST00000394258 LAMTOR3Q9UHA4 124 aa12.96□□□□□ -0.33
RCCD1-201ENST00000394258 DIRC1Q969H9 104 aa12.94□□□□□ -0.34
RCCD1-201ENST00000394258 RBM3P98179 157 aaKnown RBP12.93□□□□□ -0.34
RCCD1-201ENST00000394258 ZNF73O43830 326 aaPredicted RBP12.93□□□□□ -0.34
RCCD1-201ENST00000394258 VPREB1P12018 145 aa12.92□□□□□ -0.34
RCCD1-201ENST00000394258 Q6ZQT0 140 aa12.91□□□□□ -0.34
RCCD1-201ENST00000394258 MRAPQ8TCY5 172 aa12.91□□□□□ -0.34
RCCD1-201ENST00000394258 UBL5Q9BZL1 73 aa12.91□□□□□ -0.34
RCCD1-201ENST00000394258 LINC01556Q5JQF7 62 aa12.91□□□□□ -0.34
RCCD1-201ENST00000394258 NDUFC2-KCTD14E9PQ53 114 aa12.9□□□□□ -0.34
RCCD1-201ENST00000394258 Q6ZRP5 223 aa12.9□□□□□ -0.34
RCCD1-201ENST00000394258 SNURFQ9Y675 71 aa12.9□□□□□ -0.34
RCCD1-201ENST00000394258 HAMPP81172 84 aa12.9□□□□□ -0.34
RCCD1-201ENST00000394258 COX7BP24311 80 aa12.88□□□□□ -0.35
RCCD1-201ENST00000394258 TRAV10A0A0B4J240 114 aa12.87□□□□□ -0.35
RCCD1-201ENST00000394258 FAM236DA0A1B0GTK5 79 aa12.86□□□□□ -0.35
RCCD1-201ENST00000394258 FAM236CP0DP71 79 aa12.86□□□□□ -0.35
RCCD1-201ENST00000394258 SYCNQ0VAF6 134 aa12.86□□□□□ -0.35
RCCD1-201ENST00000394258 MGAM2Q2M2H8 2515 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms