RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 A0A087WSZ3 146 aa13.74□□□□□ -0.21
SHANK1-203ENST00000391813 UTRNP46939 3433 aa13.74□□□□□ -0.21
SHANK1-203ENST00000391813 SMCR5Q8TEV8 140 aa13.73□□□□□ -0.21
SHANK1-203ENST00000391813 LINC00474Q9P2X8 69 aa13.71□□□□□ -0.21
SHANK1-203ENST00000391813 SMIM29Q86T20 159 aa13.71□□□□□ -0.21
SHANK1-203ENST00000391813 KLK9Q2XQG4 91 aa13.69□□□□□ -0.22
SHANK1-203ENST00000391813 LY6G6CO95867 125 aa13.68□□□□□ -0.22
SHANK1-203ENST00000391813 PCOTHQ58A44 107 aa13.67□□□□□ -0.22
SHANK1-203ENST00000391813 ERC2-IT1O76042 136 aa13.66□□□□□ -0.22
SHANK1-203ENST00000391813 IGLV9-49A0A0B4J1Y8 123 aa13.66□□□□□ -0.22
SHANK1-203ENST00000391813 C1orf64Q8NEQ6 169 aa13.66□□□□□ -0.22
SHANK1-203ENST00000391813 FSHBP01225 129 aa13.65□□□□□ -0.22
SHANK1-203ENST00000391813 Q9BRP9 147 aa13.65□□□□□ -0.22
SHANK1-203ENST00000391813 HECTD1Q9ULT8 2610 aa13.65□□□□□ -0.22
SHANK1-203ENST00000391813 TM2D3Q9BRN9 247 aa13.64□□□□□ -0.23
SHANK1-203ENST00000391813 H3BPC8 53 aa13.63□□□□□ -0.23
SHANK1-203ENST00000391813 Q6ZRU5 148 aa13.63□□□□□ -0.23
SHANK1-203ENST00000391813 KRTAP24-1Q3LI83 254 aa13.62□□□□□ -0.23
SHANK1-203ENST00000391813 KIAA0087Q14695 138 aa13.62□□□□□ -0.23
SHANK1-203ENST00000391813 MUC4Q99102 2169 aa13.61□□□□□ -0.23
SHANK1-203ENST00000391813 ELOF1P60002 83 aaKnown RBP13.6□□□□□ -0.23
SHANK1-203ENST00000391813 Q9UF83 564 aa13.6□□□□□ -0.23
SHANK1-203ENST00000391813 KLKP1Q107X0 134 aa13.6□□□□□ -0.23
SHANK1-203ENST00000391813 C7orf33Q8WU49 177 aa13.59□□□□□ -0.23
SHANK1-203ENST00000391813 LYPD5Q6UWN5 251 aa13.58□□□□□ -0.24
SHANK1-203ENST00000391813 IGHV6-1A0A0B4J1U7 121 aa13.57□□□□□ -0.24
SHANK1-203ENST00000391813 DEFB116Q30KQ4 102 aa13.57□□□□□ -0.24
SHANK1-203ENST00000391813 M0R2N4 97 aa13.56□□□□□ -0.24
SHANK1-203ENST00000391813 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
SHANK1-203ENST00000391813 Q6ZTC4 211 aa13.55□□□□□ -0.24
SHANK1-203ENST00000391813 Q8NBF4 154 aa13.55□□□□□ -0.24
SHANK1-203ENST00000391813 TP53AIP1Q9HCN2 124 aa13.55□□□□□ -0.24
SHANK1-203ENST00000391813 CEP350Q5VT06 3117 aa13.52□□□□□ -0.25
SHANK1-203ENST00000391813 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.25
SHANK1-203ENST00000391813 PCNTO95613 3336 aa13.49□□□□□ -0.25
SHANK1-203ENST00000391813 LINC01600Q96MT4 127 aa13.49□□□□□ -0.25
SHANK1-203ENST00000391813 C22orf24Q9Y442 160 aa13.48□□□□□ -0.25
SHANK1-203ENST00000391813 LINC00336Q6ZUF6 198 aa13.48□□□□□ -0.25
SHANK1-203ENST00000391813 EIF4EBP3O60516 100 aaPredicted RBP13.47□□□□□ -0.25
SHANK1-203ENST00000391813 H7BZZ5 65 aa13.45□□□□□ -0.26
SHANK1-203ENST00000391813 DNAH12Q6ZR08 3092 aa13.45□□□□□ -0.26
SHANK1-203ENST00000391813 CYP4F30PQ9H0H9 118 aa13.44□□□□□ -0.26
SHANK1-203ENST00000391813 IGLV6-57P01721 117 aa13.43□□□□□ -0.26
SHANK1-203ENST00000391813 GVQW2A0A096LPI5 108 aaPredicted RBP13.42□□□□□ -0.26
SHANK1-203ENST00000391813 PRLHP81277 87 aa13.42□□□□□ -0.26
SHANK1-203ENST00000391813 HELZ2Q9BYK8 2649 aaKnown RBP13.42□□□□□ -0.26
SHANK1-203ENST00000391813 A0A096LNT2 108 aa13.41□□□□□ -0.26
SHANK1-203ENST00000391813 TRAV22A0A0B4J277 110 aa13.41□□□□□ -0.26
SHANK1-203ENST00000391813 Q6ZRX8 168 aa13.41□□□□□ -0.26
SHANK1-203ENST00000391813 LINC00167Q96N53 147 aa13.4□□□□□ -0.26
SHANK1-203ENST00000391813 WIPF1O43516 503 aa13.39□□□□□ -0.27
SHANK1-203ENST00000391813 A0A1B0GU69 56 aa13.39□□□□□ -0.27
SHANK1-203ENST00000391813 LINC01556Q5JQF7 62 aa13.38□□□□□ -0.27
SHANK1-203ENST00000391813 ACYP2P14621 99 aa13.38□□□□□ -0.27
SHANK1-203ENST00000391813 SPAG11AQ6PDA7 123 aa13.38□□□□□ -0.27
SHANK1-203ENST00000391813 C1orf134Q5TEV5 83 aa13.37□□□□□ -0.27
SHANK1-203ENST00000391813 TRBV7-4A0A0J9YYF1 115 aa13.36□□□□□ -0.27
SHANK1-203ENST00000391813 A8MUN3 132 aa13.35□□□□□ -0.27
SHANK1-203ENST00000391813 CIRBP-AS1Q8TBR5 109 aa13.35□□□□□ -0.27
SHANK1-203ENST00000391813 LINC00476Q8WZB0 136 aa13.35□□□□□ -0.27
SHANK1-203ENST00000391813 PRRC2CQ9Y520 2896 aaKnown RBP13.33□□□□□ -0.28
SHANK1-203ENST00000391813 CD164Q04900 197 aa13.32□□□□□ -0.28
SHANK1-203ENST00000391813 CHD7Q9P2D1 2997 aa13.32□□□□□ -0.28
SHANK1-203ENST00000391813 H3BNG1 76 aa13.32□□□□□ -0.28
SHANK1-203ENST00000391813 SERTAD4-AS1Q5TG53 156 aa13.31□□□□□ -0.28
SHANK1-203ENST00000391813 VPREB1P12018 145 aa13.31□□□□□ -0.28
SHANK1-203ENST00000391813 COL27A1Q8IZC6 1860 aaPredicted RBP13.3□□□□□ -0.28
SHANK1-203ENST00000391813 C8orf87E5RJ46 101 aa13.3□□□□□ -0.28
SHANK1-203ENST00000391813 X6R8D5 127 aa13.29□□□□□ -0.28
SHANK1-203ENST00000391813 IGLV5-52A0A0A0MRZ9 124 aa13.28□□□□□ -0.28
SHANK1-203ENST00000391813 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
SHANK1-203ENST00000391813 SPINK1P00995 79 aa13.25□□□□□ -0.29
SHANK1-203ENST00000391813 LINC00528Q8N1L1 170 aa13.25□□□□□ -0.29
SHANK1-203ENST00000391813 K7EQZ3 153 aa13.24□□□□□ -0.29
SHANK1-203ENST00000391813 ATP11AUNQ6ZP68 121 aa13.23□□□□□ -0.29
SHANK1-203ENST00000391813 MOBPQ13875 183 aa13.21□□□□□ -0.29
SHANK1-203ENST00000391813 OBSCN-AS1Q96MR7 158 aa13.21□□□□□ -0.29
SHANK1-203ENST00000391813 COA5Q86WW8 74 aa13.21□□□□□ -0.29
SHANK1-203ENST00000391813 ST20-AS1Q8NBB2 130 aa13.21□□□□□ -0.29
SHANK1-203ENST00000391813 LOC101927531A0A1B0GV80 90 aa13.21□□□□□ -0.3
SHANK1-203ENST00000391813 KRTAP1-3Q8IUG1 177 aa13.2□□□□□ -0.3
SHANK1-203ENST00000391813 MDFIQ99750 246 aa13.2□□□□□ -0.3
SHANK1-203ENST00000391813 WWC2-AS2Q96NR7 200 aa13.2□□□□□ -0.3
SHANK1-203ENST00000391813 A8MWP4 228 aa13.19□□□□□ -0.3
SHANK1-203ENST00000391813 RETNLBQ9BQ08 111 aa13.19□□□□□ -0.3
SHANK1-203ENST00000391813 KCNQ1DNQ9H478 68 aa13.19□□□□□ -0.3
SHANK1-203ENST00000391813 C9orf129Q5T035 196 aaKnown RBP13.19□□□□□ -0.3
SHANK1-203ENST00000391813 ZNF292O60281 2723 aa13.18□□□□□ -0.3
SHANK1-203ENST00000391813 MGAM2Q2M2H8 2515 aa13.18□□□□□ -0.3
SHANK1-203ENST00000391813 Q6ZRP5 223 aa13.15□□□□□ -0.3
SHANK1-203ENST00000391813 KTN1-AS1Q86SY8 53 aa13.15□□□□□ -0.31
SHANK1-203ENST00000391813 IGKV2D-30A0A075B6S6 120 aa13.14□□□□□ -0.31
SHANK1-203ENST00000391813 IGKV2-30P06310 120 aa13.14□□□□□ -0.31
SHANK1-203ENST00000391813 Q8NAQ8 132 aa13.14□□□□□ -0.31
SHANK1-203ENST00000391813 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
SHANK1-203ENST00000391813 RPL37AP61513 92 aaKnown RBP13.13□□□□□ -0.31
SHANK1-203ENST00000391813 HTTP42858 3142 aa13.13□□□□□ -0.31
SHANK1-203ENST00000391813 FLNAP21333 2647 aaKnown RBP13.13□□□□□ -0.31
SHANK1-203ENST00000391813 C7orf65Q6ZTY9 151 aa13.12□□□□□ -0.31
SHANK1-203ENST00000391813 ZNF575Q86XF7 245 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms