RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ATOX1O00244 68 aa9.05□□□□□ -0.96
PTPRN2-202ENST00000389416 GIG44P09565 113 aaPredicted RBP9.05□□□□□ -0.96
PTPRN2-202ENST00000389416 PLAC8L1A1L4L8 177 aa9.05□□□□□ -0.96
PTPRN2-202ENST00000389416 CR1P17927 2039 aa9.04□□□□□ -0.96
PTPRN2-202ENST00000389416 LINC01546A6NGU7 62 aa9.04□□□□□ -0.96
PTPRN2-202ENST00000389416 H0Y9J4 135 aa9.04□□□□□ -0.96
PTPRN2-202ENST00000389416 TMEM258P61165 79 aa9.04□□□□□ -0.96
PTPRN2-202ENST00000389416 C2orf48Q96LS8 159 aa9.04□□□□□ -0.96
PTPRN2-202ENST00000389416 CCKP06307 115 aa9.03□□□□□ -0.96
PTPRN2-202ENST00000389416 H3BNG1 76 aa9.03□□□□□ -0.96
PTPRN2-202ENST00000389416 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
PTPRN2-202ENST00000389416 DHRS4-AS1Q9P1J3 65 aa9.03□□□□□ -0.96
PTPRN2-202ENST00000389416 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
PTPRN2-202ENST00000389416 IGLV5-39A0A0G2JS06 123 aa9.02□□□□□ -0.97
PTPRN2-202ENST00000389416 NBEAL1Q6ZS30 2694 aa9.02□□□□□ -0.97
PTPRN2-202ENST00000389416 SPATA3Q8NHX4 192 aa9.01□□□□□ -0.97
PTPRN2-202ENST00000389416 BPY2O14599 106 aa9.01□□□□□ -0.97
PTPRN2-202ENST00000389416 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
PTPRN2-202ENST00000389416 C3orf84H3BNL1 204 aa9□□□□□ -0.97
PTPRN2-202ENST00000389416 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
PTPRN2-202ENST00000389416 A0A1B0GX51 115 aa9□□□□□ -0.97
PTPRN2-202ENST00000389416 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
PTPRN2-202ENST00000389416 LINC01561Q8N1V8 128 aa8.99□□□□□ -0.97
PTPRN2-202ENST00000389416 C5orf47Q569G3 176 aa8.99□□□□□ -0.97
PTPRN2-202ENST00000389416 IGLV9-49A0A0B4J1Y8 123 aa8.98□□□□□ -0.97
PTPRN2-202ENST00000389416 RPL28P46779 137 aaKnown RBP8.98□□□□□ -0.97
PTPRN2-202ENST00000389416 NDUFC2O95298 119 aa8.98□□□□□ -0.97
PTPRN2-202ENST00000389416 LINC00643Q86TS7 51 aa8.98□□□□□ -0.97
PTPRN2-202ENST00000389416 LRBAP50851 2863 aa8.97□□□□□ -0.97
PTPRN2-202ENST00000389416 C10orf25Q5T742 122 aa8.97□□□□□ -0.97
PTPRN2-202ENST00000389416 HRCT1Q6UXD1 115 aa8.97□□□□□ -0.97
PTPRN2-202ENST00000389416 LOC400499M0QZD8 3231 aa8.97□□□□□ -0.97
PTPRN2-202ENST00000389416 LINC00337Q8N6G1 96 aa8.97□□□□□ -0.97
PTPRN2-202ENST00000389416 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.96□□□□□ -0.97
PTPRN2-202ENST00000389416 MRPL55Q7Z7F7 128 aaKnown RBP8.96□□□□□ -0.98
PTPRN2-202ENST00000389416 REG3GQ6UW15 175 aa8.96□□□□□ -0.98
PTPRN2-202ENST00000389416 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.98
PTPRN2-202ENST00000389416 ENHOQ6UWT2 76 aa8.96□□□□□ -0.98
PTPRN2-202ENST00000389416 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
PTPRN2-202ENST00000389416 SDIM1Q6ZPB5 146 aa8.95□□□□□ -0.98
PTPRN2-202ENST00000389416 A0A087WYN8 130 aa8.95□□□□□ -0.98
PTPRN2-202ENST00000389416 C6orf48Q9UBA6 75 aa8.94□□□□□ -0.98
PTPRN2-202ENST00000389416 F8WDY8 70 aa8.94□□□□□ -0.98
PTPRN2-202ENST00000389416 NBEAL2Q6ZNJ1 2754 aa8.94□□□□□ -0.98
PTPRN2-202ENST00000389416 Q8N814 137 aa8.94□□□□□ -0.98
PTPRN2-202ENST00000389416 ZNF706Q9Y5V0 76 aaPredicted RBP8.93□□□□□ -0.98
PTPRN2-202ENST00000389416 UQCRQO14949 82 aa8.93□□□□□ -0.98
PTPRN2-202ENST00000389416 NSD1Q96L73 2696 aaPredicted RBP8.93□□□□□ -0.98
PTPRN2-202ENST00000389416 UTP20O75691 2785 aaKnown RBP8.92□□□□□ -0.98
PTPRN2-202ENST00000389416 NBDYA0A0U1RRE5 68 aa8.92□□□□□ -0.98
PTPRN2-202ENST00000389416 C1orf137Q5JT78 98 aa8.92□□□□□ -0.98
PTPRN2-202ENST00000389416 UPK3BQ9BT76 320 aa8.92□□□□□ -0.98
PTPRN2-202ENST00000389416 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
PTPRN2-202ENST00000389416 PRLHP81277 87 aa8.91□□□□□ -0.98
PTPRN2-202ENST00000389416 WWC2-AS2Q96NR7 200 aa8.91□□□□□ -0.98
PTPRN2-202ENST00000389416 USP34Q70CQ2 3546 aa8.9□□□□□ -0.99
PTPRN2-202ENST00000389416 MP68P56378 58 aa8.9□□□□□ -0.99
PTPRN2-202ENST00000389416 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
PTPRN2-202ENST00000389416 MYO15AQ9UKN7 3530 aa8.88□□□□□ -0.99
PTPRN2-202ENST00000389416 HIVEP1P15822 2718 aa8.88□□□□□ -0.99
PTPRN2-202ENST00000389416 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
PTPRN2-202ENST00000389416 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
PTPRN2-202ENST00000389416 XGP55808 180 aa8.86□□□□□ -0.99
PTPRN2-202ENST00000389416 LINC00612Q8N6U2 182 aa8.86□□□□□ -0.99
PTPRN2-202ENST00000389416 TM2D3Q9BRN9 247 aa8.86□□□□□ -0.99
PTPRN2-202ENST00000389416 BRK1Q8WUW1 75 aa8.86□□□□□ -0.99
PTPRN2-202ENST00000389416 PRYO14603 147 aa8.85□□□□□ -0.99
PTPRN2-202ENST00000389416 ZANQ9Y493 2812 aa8.85□□□□□ -0.99
PTPRN2-202ENST00000389416 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
PTPRN2-202ENST00000389416 LINC00575Q6W349 94 aa8.84□□□□□ -0.99
PTPRN2-202ENST00000389416 CCDC179H3BU77 68 aa8.84□□□□□ -0.99
PTPRN2-202ENST00000389416 CIRBP-AS1Q8TBR5 109 aa8.84□□□□□ -0.99
PTPRN2-202ENST00000389416 APCP25054 2843 aa8.84□□□□□ -1
PTPRN2-202ENST00000389416 IGKV4-1P06312 121 aa8.82□□□□□ -1
PTPRN2-202ENST00000389416 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
PTPRN2-202ENST00000389416 Q9BRP9 147 aa8.82□□□□□ -1
PTPRN2-202ENST00000389416 CHTF8P0CG12 524 aa8.81□□□□□ -1
PTPRN2-202ENST00000389416 ATP5EP2Q5VTU8 51 aa8.81□□□□□ -1
PTPRN2-202ENST00000389416 SMCR5Q8TEV8 140 aa8.8□□□□□ -1
PTPRN2-202ENST00000389416 IMUPQ9GZP8 106 aa8.8□□□□□ -1
PTPRN2-202ENST00000389416 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
PTPRN2-202ENST00000389416 ZNF575Q86XF7 245 aa8.8□□□□□ -1
PTPRN2-202ENST00000389416 RTL8CO15255 209 aa8.79□□□□□ -1
PTPRN2-202ENST00000389416 C20orf197Q8N268 126 aa8.79□□□□□ -1
PTPRN2-202ENST00000389416 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
PTPRN2-202ENST00000389416 Q6ZRP5 223 aa8.78□□□□□ -1
PTPRN2-202ENST00000389416 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
PTPRN2-202ENST00000389416 FAM236CP0DP71 79 aa8.78□□□□□ -1
PTPRN2-202ENST00000389416 PRR34Q9NV39 138 aa8.78□□□□□ -1
PTPRN2-202ENST00000389416 V9GYY9 64 aa8.78□□□□□ -1
PTPRN2-202ENST00000389416 Q6Q795 121 aa8.77□□□□□ -1.01
PTPRN2-202ENST00000389416 A0A087WSZ3 146 aa8.76□□□□□ -1.01
PTPRN2-202ENST00000389416 MUC3AQ02505 3323 aa8.76□□□□□ -1.01
PTPRN2-202ENST00000389416 LITAFQ99732 161 aa8.75□□□□□ -1.01
PTPRN2-202ENST00000389416 C16orf90A8MZG2 172 aa8.74□□□□□ -1.01
PTPRN2-202ENST00000389416 COX7CP15954 63 aa8.74□□□□□ -1.01
PTPRN2-202ENST00000389416 FAM218AQ96MZ4 157 aa8.74□□□□□ -1.01
PTPRN2-202ENST00000389416 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
PTPRN2-202ENST00000389416 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
PTPRN2-202ENST00000389416 SERP2Q8N6R1 65 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms