RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 Q6ZQT0 140 aa7.71□□□□□ -1.18
NPC1L1-202ENST00000381160 C6orf223Q8N319 242 aa7.7□□□□□ -1.18
NPC1L1-202ENST00000381160 BBC3Q96PG8 261 aaPredicted RBP7.7□□□□□ -1.18
NPC1L1-202ENST00000381160 TM2D3Q9BRN9 247 aa7.7□□□□□ -1.18
NPC1L1-202ENST00000381160 NF1P21359 2839 aa7.69□□□□□ -1.18
NPC1L1-202ENST00000381160 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
NPC1L1-202ENST00000381160 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
NPC1L1-202ENST00000381160 UNQ6190/PRO20217Q6UXQ8 127 aa7.69□□□□□ -1.18
NPC1L1-202ENST00000381160 Q8N9L7 120 aa7.69□□□□□ -1.18
NPC1L1-202ENST00000381160 J3QKU1 62 aa7.68□□□□□ -1.18
NPC1L1-202ENST00000381160 REG3AQ06141 175 aa7.68□□□□□ -1.18
NPC1L1-202ENST00000381160 LINC00482Q8N8I6 264 aa7.68□□□□□ -1.18
NPC1L1-202ENST00000381160 LINC01006Q8NI28 216 aa7.68□□□□□ -1.18
NPC1L1-202ENST00000381160 NIPBLQ6KC79 2804 aaeCLIP7.68□□□□□ -1.18
NPC1L1-202ENST00000381160 IGHV4-31P0DP07 118 aa7.68□□□□□ -1.18
NPC1L1-202ENST00000381160 MIFP14174 115 aa7.67□□□□□ -1.18
NPC1L1-202ENST00000381160 LYPD5Q6UWN5 251 aa7.67□□□□□ -1.18
NPC1L1-202ENST00000381160 PLAC8L1A1L4L8 177 aa7.67□□□□□ -1.18
NPC1L1-202ENST00000381160 CD164L2Q6UWJ8 174 aa7.67□□□□□ -1.18
NPC1L1-202ENST00000381160 GIG44P09565 113 aaPredicted RBP7.66□□□□□ -1.18
NPC1L1-202ENST00000381160 NREPQ16612 68 aa7.66□□□□□ -1.18
NPC1L1-202ENST00000381160 C10orf25Q5T742 122 aa7.66□□□□□ -1.18
NPC1L1-202ENST00000381160 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
NPC1L1-202ENST00000381160 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
NPC1L1-202ENST00000381160 MUC7Q8TAX7 377 aa7.65□□□□□ -1.18
NPC1L1-202ENST00000381160 LINC00167Q96N53 147 aa7.65□□□□□ -1.18
NPC1L1-202ENST00000381160 RETNQ9HD89 108 aa7.65□□□□□ -1.18
NPC1L1-202ENST00000381160 SETXQ7Z333 2677 aaKnown RBP7.65□□□□□ -1.18
NPC1L1-202ENST00000381160 C16orf95Q9H693 158 aa7.65□□□□□ -1.18
NPC1L1-202ENST00000381160 PRO0255Q9UI72 69 aa7.65□□□□□ -1.18
NPC1L1-202ENST00000381160 CMC4P56277 68 aaPredicted RBP7.65□□□□□ -1.19
NPC1L1-202ENST00000381160 DEFB105AQ8NG35 78 aa7.65□□□□□ -1.19
NPC1L1-202ENST00000381160 IGHV4-28A0A0C4DH34 117 aa7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 BPY2O14599 106 aa7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 PMAIP1Q13794 54 aa7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 COX17Q14061 63 aa7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 Q8NDZ9 215 aa7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 ZNF469Q96JG9 3925 aaPredicted RBP7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 C3orf84H3BNL1 204 aa7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 PRB2P02812 416 aaPredicted RBP7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 KLK12Q9UKR0 248 aa7.64□□□□□ -1.19
NPC1L1-202ENST00000381160 CYSRT1A8MQ03 144 aa7.63□□□□□ -1.19
NPC1L1-202ENST00000381160 KLKP1Q107X0 134 aa7.63□□□□□ -1.19
NPC1L1-202ENST00000381160 PDE6GP18545 87 aa7.63□□□□□ -1.19
NPC1L1-202ENST00000381160 TMEM254Q8TBM7 123 aa7.63□□□□□ -1.19
NPC1L1-202ENST00000381160 LRCOL1A6NCL2 159 aa7.63□□□□□ -1.19
NPC1L1-202ENST00000381160 COX7BP24311 80 aa7.63□□□□□ -1.19
NPC1L1-202ENST00000381160 TENM4Q6N022 2769 aa7.62□□□□□ -1.19
NPC1L1-202ENST00000381160 NDUFC1O43677 76 aa7.62□□□□□ -1.19
NPC1L1-202ENST00000381160 DNAJC9-AS1A6NH13 148 aa7.62□□□□□ -1.19
NPC1L1-202ENST00000381160 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
NPC1L1-202ENST00000381160 A0A1B0GUV1 79 aa7.61□□□□□ -1.19
NPC1L1-202ENST00000381160 KIAA0087Q14695 138 aa7.61□□□□□ -1.19
NPC1L1-202ENST00000381160 CXCL6P80162 114 aa7.61□□□□□ -1.19
NPC1L1-202ENST00000381160 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.61□□□□□ -1.19
NPC1L1-202ENST00000381160 HIGD2BQ4VC39 106 aa7.6□□□□□ -1.19
NPC1L1-202ENST00000381160 APCP25054 2843 aa7.6□□□□□ -1.19
NPC1L1-202ENST00000381160 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
NPC1L1-202ENST00000381160 FUSP35637 526 aaKnown RBP eCLIP7.6□□□□□ -1.19
NPC1L1-202ENST00000381160 CELA1Q9UNI1 258 aa7.6□□□□□ -1.19
NPC1L1-202ENST00000381160 ATP5EP56381 51 aaPredicted RBP7.6□□□□□ -1.19
NPC1L1-202ENST00000381160 KRTAP10-9P60411 292 aa7.59□□□□□ -1.19
NPC1L1-202ENST00000381160 DEFB135Q30KP9 77 aa7.59□□□□□ -1.19
NPC1L1-202ENST00000381160 EPM2AB3EWF7 344 aa7.59□□□□□ -1.19
NPC1L1-202ENST00000381160 CR1P17927 2039 aa7.59□□□□□ -1.19
NPC1L1-202ENST00000381160 CSNK1G2-AS1Q8NCQ2 148 aa7.57□□□□□ -1.2
NPC1L1-202ENST00000381160 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
NPC1L1-202ENST00000381160 FLNAP21333 2647 aaKnown RBP7.57□□□□□ -1.2
NPC1L1-202ENST00000381160 BCE1O60756 84 aa7.57□□□□□ -1.2
NPC1L1-202ENST00000381160 PRYO14603 147 aa7.56□□□□□ -1.2
NPC1L1-202ENST00000381160 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
NPC1L1-202ENST00000381160 FAM30AQ9NZY2 134 aa7.56□□□□□ -1.2
NPC1L1-202ENST00000381160 F8P00451 2351 aa7.56□□□□□ -1.2
NPC1L1-202ENST00000381160 IGLV1-51P01701 117 aa7.56□□□□□ -1.2
NPC1L1-202ENST00000381160 ESRGQ1W209 222 aa7.56□□□□□ -1.2
NPC1L1-202ENST00000381160 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
NPC1L1-202ENST00000381160 FSHBP01225 129 aa7.55□□□□□ -1.2
NPC1L1-202ENST00000381160 PRR4Q16378 134 aa7.55□□□□□ -1.2
NPC1L1-202ENST00000381160 DEFB113Q30KQ7 82 aa7.54□□□□□ -1.2
NPC1L1-202ENST00000381160 IGLV6-57P01721 117 aa7.54□□□□□ -1.2
NPC1L1-202ENST00000381160 TRBV7-4A0A0J9YYF1 115 aa7.54□□□□□ -1.2
NPC1L1-202ENST00000381160 HELZ2Q9BYK8 2649 aaKnown RBP7.53□□□□□ -1.2
NPC1L1-202ENST00000381160 H3BQ85 93 aa7.53□□□□□ -1.2
NPC1L1-202ENST00000381160 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
NPC1L1-202ENST00000381160 C19orf73Q9NVV2 129 aa7.52□□□□□ -1.21
NPC1L1-202ENST00000381160 PSPHP1O15172 72 aa7.52□□□□□ -1.21
NPC1L1-202ENST00000381160 C6orf48Q9UBA6 75 aa7.52□□□□□ -1.21
NPC1L1-202ENST00000381160 C9orf66Q5T8R8 295 aa7.51□□□□□ -1.21
NPC1L1-202ENST00000381160 ITPR3Q14573 2671 aa7.51□□□□□ -1.21
NPC1L1-202ENST00000381160 UBR5O95071 2799 aaPredicted RBP7.51□□□□□ -1.21
NPC1L1-202ENST00000381160 FLNBO75369 2602 aaKnown RBP7.51□□□□□ -1.21
NPC1L1-202ENST00000381160 NKAPP1Q8N9T2 125 aa7.49□□□□□ -1.21
NPC1L1-202ENST00000381160 KMT2BQ9UMN6 2715 aaPredicted RBP7.49□□□□□ -1.21
NPC1L1-202ENST00000381160 SMIM29Q86T20 159 aa7.49□□□□□ -1.21
NPC1L1-202ENST00000381160 X6R8D5 127 aa7.49□□□□□ -1.21
NPC1L1-202ENST00000381160 ELOF1P60002 83 aaKnown RBP7.48□□□□□ -1.21
NPC1L1-202ENST00000381160 UNC79Q9P2D8 2635 aa7.48□□□□□ -1.21
NPC1L1-202ENST00000381160 A0A0J9YWU9 116 aa7.47□□□□□ -1.21
NPC1L1-202ENST00000381160 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
NPC1L1-202ENST00000381160 IGHV4-30-4P0DP06 118 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms