RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 F8P00451 2351 aa11.1□□□□□ -0.63
COL2A1-202ENST00000380518 PSPHP1O15172 72 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 RETNLBQ9BQ08 111 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 SBSPONQ8IVN8 264 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 ACANP16112 2415 aa11.08□□□□□ -0.64
COL2A1-202ENST00000380518 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
COL2A1-202ENST00000380518 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
COL2A1-202ENST00000380518 H3BNG1 76 aa11.07□□□□□ -0.64
COL2A1-202ENST00000380518 PRO0461Q9UI25 63 aa11.07□□□□□ -0.64
COL2A1-202ENST00000380518 Q9UF83 564 aa11.06□□□□□ -0.64
COL2A1-202ENST00000380518 C1orf64Q8NEQ6 169 aa11.06□□□□□ -0.64
COL2A1-202ENST00000380518 X6R8D5 127 aa11.06□□□□□ -0.64
COL2A1-202ENST00000380518 SPINK1P00995 79 aa11.05□□□□□ -0.64
COL2A1-202ENST00000380518 FAM218AQ96MZ4 157 aa11.05□□□□□ -0.64
COL2A1-202ENST00000380518 A0A1B0GW54 56 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 BCE1O60756 84 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 FSHBP01225 129 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 SMIM29Q86T20 159 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.65
COL2A1-202ENST00000380518 CRYGAP11844 174 aa11.01□□□□□ -0.65
COL2A1-202ENST00000380518 MDFIQ99750 246 aa11□□□□□ -0.65
COL2A1-202ENST00000380518 ANKRD17O75179 2603 aaKnown RBP11□□□□□ -0.65
COL2A1-202ENST00000380518 KLK9Q2XQG4 91 aa11□□□□□ -0.65
COL2A1-202ENST00000380518 TP53AIP1Q9HCN2 124 aa10.99□□□□□ -0.65
COL2A1-202ENST00000380518 PTPRBP23467 1997 aa10.98□□□□□ -0.65
COL2A1-202ENST00000380518 Q6ZQT0 140 aa10.97□□□□□ -0.65
COL2A1-202ENST00000380518 Q8NBF4 154 aa10.97□□□□□ -0.65
COL2A1-202ENST00000380518 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 IGKV2-30P06310 120 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 Q6ZRX8 168 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 MOBPQ13875 183 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
COL2A1-202ENST00000380518 Q8NAQ8 132 aa10.93□□□□□ -0.66
COL2A1-202ENST00000380518 LINC00476Q8WZB0 136 aa10.92□□□□□ -0.66
COL2A1-202ENST00000380518 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
COL2A1-202ENST00000380518 SPACA4Q8TDM5 124 aa10.9□□□□□ -0.66
COL2A1-202ENST00000380518 LITAFQ99732 161 aa10.9□□□□□ -0.66
COL2A1-202ENST00000380518 GVQW2A0A096LPI5 108 aaPredicted RBP10.89□□□□□ -0.67
COL2A1-202ENST00000380518 COL4A2P08572 1712 aa10.89□□□□□ -0.67
COL2A1-202ENST00000380518 H3BPC8 53 aa10.89□□□□□ -0.67
COL2A1-202ENST00000380518 PHF5AQ7RTV0 110 aaKnown RBP10.88□□□□□ -0.67
COL2A1-202ENST00000380518 C16orf90A8MZG2 172 aa10.88□□□□□ -0.67
COL2A1-202ENST00000380518 RPS28P62857 69 aaKnown RBP10.87□□□□□ -0.67
COL2A1-202ENST00000380518 KRTAP24-1Q3LI83 254 aa10.87□□□□□ -0.67
COL2A1-202ENST00000380518 EPM2AB3EWF7 344 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 ACYP2P14621 99 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 C7orf65Q6ZTY9 151 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 PRO0628Q9UI54 55 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 LINC00588Q9Y4M8 146 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 COL27A1Q8IZC6 1860 aaPredicted RBP10.86□□□□□ -0.67
COL2A1-202ENST00000380518 A0A1B0GU69 56 aa10.85□□□□□ -0.67
COL2A1-202ENST00000380518 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
COL2A1-202ENST00000380518 NBDYA0A0U1RRE5 68 aa10.85□□□□□ -0.67
COL2A1-202ENST00000380518 TRAV22A0A0B4J277 110 aa10.84□□□□□ -0.67
COL2A1-202ENST00000380518 VPREB1P12018 145 aa10.83□□□□□ -0.68
COL2A1-202ENST00000380518 IGLV6-57P01721 117 aa10.83□□□□□ -0.68
COL2A1-202ENST00000380518 Q6ZRP5 223 aa10.82□□□□□ -0.68
COL2A1-202ENST00000380518 TM2D3Q9BRN9 247 aa10.81□□□□□ -0.68
COL2A1-202ENST00000380518 RTL8CO15255 209 aa10.81□□□□□ -0.68
COL2A1-202ENST00000380518 DNAH10OSP0CZ25 163 aa10.8□□□□□ -0.68
COL2A1-202ENST00000380518 TRBV7-4A0A0J9YYF1 115 aa10.8□□□□□ -0.68
COL2A1-202ENST00000380518 FLNBO75369 2602 aaKnown RBP10.77□□□□□ -0.69
COL2A1-202ENST00000380518 LINC00313P59037 77 aa10.77□□□□□ -0.69
COL2A1-202ENST00000380518 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
COL2A1-202ENST00000380518 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
COL2A1-202ENST00000380518 CSNK1G2-AS1Q8NCQ2 148 aa10.76□□□□□ -0.69
COL2A1-202ENST00000380518 RPL37AP61513 92 aaKnown RBP10.75□□□□□ -0.69
COL2A1-202ENST00000380518 USP24Q9UPU5 2620 aa10.74□□□□□ -0.69
COL2A1-202ENST00000380518 C4orf26Q17RF5 130 aa10.74□□□□□ -0.69
COL2A1-202ENST00000380518 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
COL2A1-202ENST00000380518 KCNQ1DNQ9H478 68 aa10.72□□□□□ -0.69
COL2A1-202ENST00000380518 A8MWP4 228 aa10.71□□□□□ -0.7
COL2A1-202ENST00000380518 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.7
COL2A1-202ENST00000380518 IGLV1-50A0A075B6I6 118 aa10.7□□□□□ -0.7
COL2A1-202ENST00000380518 FAM168BA1KXE4 195 aa10.7□□□□□ -0.7
COL2A1-202ENST00000380518 SERTAD4-AS1Q5TG53 156 aa10.7□□□□□ -0.7
COL2A1-202ENST00000380518 PRRC2CQ9Y520 2896 aaKnown RBP10.7□□□□□ -0.7
COL2A1-202ENST00000380518 LOC101927531A0A1B0GV80 90 aa10.69□□□□□ -0.7
COL2A1-202ENST00000380518 EIF4EBP3O60516 100 aaPredicted RBP10.69□□□□□ -0.7
COL2A1-202ENST00000380518 MGAM2Q2M2H8 2515 aa10.69□□□□□ -0.7
COL2A1-202ENST00000380518 ERC2-IT1O76042 136 aa10.69□□□□□ -0.7
COL2A1-202ENST00000380518 PRR34Q9NV39 138 aa10.68□□□□□ -0.7
COL2A1-202ENST00000380518 PCSK5Q92824 1860 aa10.68□□□□□ -0.7
COL2A1-202ENST00000380518 K7EQZ3 153 aa10.68□□□□□ -0.7
COL2A1-202ENST00000380518 FAM229AH3BQW9 127 aa10.67□□□□□ -0.7
COL2A1-202ENST00000380518 C8orf87E5RJ46 101 aa10.67□□□□□ -0.7
COL2A1-202ENST00000380518 ATP11AUNQ6ZP68 121 aa10.66□□□□□ -0.7
COL2A1-202ENST00000380518 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
COL2A1-202ENST00000380518 Q96NJ1 140 aa10.62□□□□□ -0.71
COL2A1-202ENST00000380518 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
COL2A1-202ENST00000380518 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
COL2A1-202ENST00000380518 HECTD1Q9ULT8 2610 aa10.61□□□□□ -0.71
COL2A1-202ENST00000380518 A0A096LNT2 108 aa10.61□□□□□ -0.71
COL2A1-202ENST00000380518 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 IGFL1Q6UW32 110 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 LINC00612Q8N6U2 182 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 WWC2-AS2Q96NR7 200 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 PLA2G1BP04054 148 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms