RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
PCNA-201ENST00000379143 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
PCNA-201ENST00000379143 SMIM13P0DJ93 91 aa7.47□□□□□ -1.21
PCNA-201ENST00000379143 RPL37AP61513 92 aaKnown RBP7.47□□□□□ -1.21
PCNA-201ENST00000379143 SND1-IT1Q9HBX3 110 aa7.47□□□□□ -1.21
PCNA-201ENST00000379143 TMA7Q9Y2S6 64 aaKnown RBP7.47□□□□□ -1.21
PCNA-201ENST00000379143 MYCBP2O75592 4640 aa7.46□□□□□ -1.22
PCNA-201ENST00000379143 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
PCNA-201ENST00000379143 M0QXV9 152 aa7.46□□□□□ -1.22
PCNA-201ENST00000379143 SCGB1D1O95968 90 aa7.46□□□□□ -1.22
PCNA-201ENST00000379143 IGKV2D-26A0A0A0MRZ7 120 aa7.45□□□□□ -1.22
PCNA-201ENST00000379143 A0A0U1RRA0 63 aa7.45□□□□□ -1.22
PCNA-201ENST00000379143 RPL24P83731 157 aaKnown RBP7.45□□□□□ -1.22
PCNA-201ENST00000379143 LBHQ53QV2 105 aaPredicted RBP7.45□□□□□ -1.22
PCNA-201ENST00000379143 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
PCNA-201ENST00000379143 MIR7-3HGQ8N6C7 128 aa7.45□□□□□ -1.22
PCNA-201ENST00000379143 TP73-AS1Q9UF72 201 aa7.45□□□□□ -1.22
PCNA-201ENST00000379143 IGLV5-37A0A075B6J1 123 aa7.44□□□□□ -1.22
PCNA-201ENST00000379143 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
PCNA-201ENST00000379143 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
PCNA-201ENST00000379143 PHF5AQ7RTV0 110 aaKnown RBP7.44□□□□□ -1.22
PCNA-201ENST00000379143 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
PCNA-201ENST00000379143 NKAPP1Q8N9T2 125 aa7.44□□□□□ -1.22
PCNA-201ENST00000379143 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
PCNA-201ENST00000379143 FAT1Q14517 4588 aa7.43□□□□□ -1.22
PCNA-201ENST00000379143 TMEM238LA0A1B0GVL6 79 aa7.43□□□□□ -1.22
PCNA-201ENST00000379143 UBE2BP63146 152 aa7.43□□□□□ -1.22
PCNA-201ENST00000379143 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
PCNA-201ENST00000379143 MRPL55Q7Z7F7 128 aaKnown RBP7.43□□□□□ -1.22
PCNA-201ENST00000379143 TIMM17BO60830 172 aa7.42□□□□□ -1.22
PCNA-201ENST00000379143 MIEN1Q9BRT3 115 aa7.42□□□□□ -1.22
PCNA-201ENST00000379143 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
PCNA-201ENST00000379143 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
PCNA-201ENST00000379143 VPREB1P12018 145 aa7.4□□□□□ -1.22
PCNA-201ENST00000379143 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
PCNA-201ENST00000379143 PRR3P79522 188 aaKnown RBP7.4□□□□□ -1.22
PCNA-201ENST00000379143 JOSD1Q15040 202 aaPredicted RBP7.4□□□□□ -1.22
PCNA-201ENST00000379143 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
PCNA-201ENST00000379143 BOD1L2Q8IYS8 172 aa7.4□□□□□ -1.22
PCNA-201ENST00000379143 TTTY13Q9BZ97 58 aa7.4□□□□□ -1.22
PCNA-201ENST00000379143 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
PCNA-201ENST00000379143 DAND5Q8N907 189 aa7.39□□□□□ -1.23
PCNA-201ENST00000379143 LINC00167Q96N53 147 aa7.39□□□□□ -1.23
PCNA-201ENST00000379143 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
PCNA-201ENST00000379143 SRRM2Q9UQ35 2752 aaKnown RBP7.39□□□□□ -1.23
PCNA-201ENST00000379143 TMEM238C9JI98 176 aa7.38□□□□□ -1.23
PCNA-201ENST00000379143 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
PCNA-201ENST00000379143 VPS13BQ7Z7G8 4022 aa7.38□□□□□ -1.23
PCNA-201ENST00000379143 M0R378 163 aa7.37□□□□□ -1.23
PCNA-201ENST00000379143 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
PCNA-201ENST00000379143 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
PCNA-201ENST00000379143 COPS9Q8WXC6 57 aa7.37□□□□□ -1.23
PCNA-201ENST00000379143 LITAFQ99732 161 aa7.37□□□□□ -1.23
PCNA-201ENST00000379143 GAGE10A6NGK3 116 aa7.36□□□□□ -1.23
PCNA-201ENST00000379143 NDUFC2O95298 119 aa7.36□□□□□ -1.23
PCNA-201ENST00000379143 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
PCNA-201ENST00000379143 Q6ZVH6 145 aa7.36□□□□□ -1.23
PCNA-201ENST00000379143 Q8NDZ9 215 aa7.36□□□□□ -1.23
PCNA-201ENST00000379143 RPL37AP8A6NKH3 93 aa7.35□□□□□ -1.23
PCNA-201ENST00000379143 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
PCNA-201ENST00000379143 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
PCNA-201ENST00000379143 VAMP8Q9BV40 100 aa7.35□□□□□ -1.23
PCNA-201ENST00000379143 SPANXDQ9BXN6 97 aa7.35□□□□□ -1.23
PCNA-201ENST00000379143 SPANXCQ9NY87 97 aa7.35□□□□□ -1.23
PCNA-201ENST00000379143 IGLV1-50A0A075B6I6 118 aa7.34□□□□□ -1.23
PCNA-201ENST00000379143 TRBV10-2A0A0K0K1G8 114 aa7.34□□□□□ -1.23
PCNA-201ENST00000379143 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
PCNA-201ENST00000379143 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
PCNA-201ENST00000379143 IGKV2-28A0A075B6P5 120 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 IGKV2D-28P01615 120 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 COX8AP10176 69 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 IFITM1P13164 125 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 NPC2P61916 151 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 PPDPFQ9H3Y8 114 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 PAM16Q9Y3D7 125 aa7.33□□□□□ -1.24
PCNA-201ENST00000379143 NCR3O14931 201 aa7.32□□□□□ -1.24
PCNA-201ENST00000379143 DLEU1O43261 78 aa7.32□□□□□ -1.24
PCNA-201ENST00000379143 IGLV7-43P04211 117 aa7.32□□□□□ -1.24
PCNA-201ENST00000379143 S100A12P80511 92 aa7.32□□□□□ -1.24
PCNA-201ENST00000379143 SPATA45Q537H7 98 aa7.32□□□□□ -1.24
PCNA-201ENST00000379143 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
PCNA-201ENST00000379143 UBR4Q5T4S7 5183 aa7.32□□□□□ -1.24
PCNA-201ENST00000379143 BCE1O60756 84 aa7.31□□□□□ -1.24
PCNA-201ENST00000379143 HNRNPA3P51991 378 aaKnown RBP7.31□□□□□ -1.24
PCNA-201ENST00000379143 SRSF9Q13242 221 aaKnown RBP eCLIP7.31□□□□□ -1.24
PCNA-201ENST00000379143 REG3GQ6UW15 175 aa7.3□□□□□ -1.24
PCNA-201ENST00000379143 LINC00518Q8N0U6 118 aa7.3□□□□□ -1.24
PCNA-201ENST00000379143 PRYO14603 147 aa7.29□□□□□ -1.24
PCNA-201ENST00000379143 S100A7L2Q5SY68 101 aa7.29□□□□□ -1.24
PCNA-201ENST00000379143 TMEM126AQ9H061 195 aa7.29□□□□□ -1.24
PCNA-201ENST00000379143 CBY1Q9Y3M2 126 aa7.29□□□□□ -1.24
PCNA-201ENST00000379143 TRBV10-3A0A0K0K1G6 114 aa7.28□□□□□ -1.24
PCNA-201ENST00000379143 ZNF861PO60384 105 aa7.28□□□□□ -1.24
PCNA-201ENST00000379143 DDTP30046 118 aa7.28□□□□□ -1.24
PCNA-201ENST00000379143 RPL28P46779 137 aaKnown RBP7.28□□□□□ -1.24
PCNA-201ENST00000379143 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
PCNA-201ENST00000379143 DIRC1Q969H9 104 aa7.28□□□□□ -1.24
PCNA-201ENST00000379143 C14orf144Q96I85 54 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms