RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 LINC00167Q96N53 147 aa13.77□□□□□ -0.2
CLN5-201ENST00000377453 F8P00451 2351 aa13.77□□□□□ -0.21
CLN5-201ENST00000377453 A0A1B0GX51 115 aa13.77□□□□□ -0.21
CLN5-201ENST00000377453 C9orf66Q5T8R8 295 aa13.77□□□□□ -0.21
CLN5-201ENST00000377453 XAGE1AQ9HD64 81 aa13.77□□□□□ -0.21
CLN5-201ENST00000377453 hADV29S1A0JD25 119 aa13.76□□□□□ -0.21
CLN5-201ENST00000377453 NDUFC2O95298 119 aa13.76□□□□□ -0.21
CLN5-201ENST00000377453 M0R2N4 97 aa13.75□□□□□ -0.21
CLN5-201ENST00000377453 COX7CP15954 63 aa13.75□□□□□ -0.21
CLN5-201ENST00000377453 COX17Q14061 63 aa13.75□□□□□ -0.21
CLN5-201ENST00000377453 ENHOQ6UWT2 76 aa13.73□□□□□ -0.21
CLN5-201ENST00000377453 FAM19A1Q7Z5A9 133 aa13.73□□□□□ -0.21
CLN5-201ENST00000377453 PKD1L1Q8TDX9 2849 aa13.72□□□□□ -0.21
CLN5-201ENST00000377453 APOC4P55056 127 aa13.72□□□□□ -0.21
CLN5-201ENST00000377453 LINC00575Q6W349 94 aa13.72□□□□□ -0.21
CLN5-201ENST00000377453 TMEM256-PLSCR3K7ERE1 68 aa13.71□□□□□ -0.21
CLN5-201ENST00000377453 ATOX1O00244 68 aa13.71□□□□□ -0.22
CLN5-201ENST00000377453 USP17L23D6RBM5 183 aa13.7□□□□□ -0.22
CLN5-201ENST00000377453 HIGD2BQ4VC39 106 aa13.7□□□□□ -0.22
CLN5-201ENST00000377453 RETNQ9HD89 108 aa13.7□□□□□ -0.22
CLN5-201ENST00000377453 LELP1Q5T871 98 aa13.69□□□□□ -0.22
CLN5-201ENST00000377453 LOC107984640A0A0U1RRK4 108 aa13.68□□□□□ -0.22
CLN5-201ENST00000377453 IGHV4-30-4P0DP06 118 aa13.68□□□□□ -0.22
CLN5-201ENST00000377453 JMJD7-PLA2G4BH0Y9G9 81 aa13.68□□□□□ -0.22
CLN5-201ENST00000377453 SPART-AS1P0CW21 52 aa13.68□□□□□ -0.22
CLN5-201ENST00000377453 C6orf48Q9UBA6 75 aa13.68□□□□□ -0.22
CLN5-201ENST00000377453 TRAV23DV6A0A075B6W5 121 aa13.67□□□□□ -0.22
CLN5-201ENST00000377453 TRBV10-3A0A0K0K1G6 114 aa13.67□□□□□ -0.22
CLN5-201ENST00000377453 LAMTOR3Q9UHA4 124 aa13.67□□□□□ -0.22
CLN5-201ENST00000377453 Q6ZQY7 126 aa13.66□□□□□ -0.22
CLN5-201ENST00000377453 WFDC10BQ8IUB3 73 aa13.65□□□□□ -0.22
CLN5-201ENST00000377453 MIFP14174 115 aa13.64□□□□□ -0.23
CLN5-201ENST00000377453 PRR34Q9NV39 138 aa13.64□□□□□ -0.23
CLN5-201ENST00000377453 LYPD5Q6UWN5 251 aa13.63□□□□□ -0.23
CLN5-201ENST00000377453 A0A0J9YWU9 116 aa13.62□□□□□ -0.23
CLN5-201ENST00000377453 IGLV6-57P01721 117 aa13.62□□□□□ -0.23
CLN5-201ENST00000377453 CRYGAP11844 174 aa13.61□□□□□ -0.23
CLN5-201ENST00000377453 RBM3P98179 157 aaKnown RBP13.61□□□□□ -0.23
CLN5-201ENST00000377453 Q6ZQT0 140 aa13.61□□□□□ -0.23
CLN5-201ENST00000377453 SERP2Q8N6R1 65 aa13.6□□□□□ -0.23
CLN5-201ENST00000377453 UPK3BQ9BT76 320 aa13.58□□□□□ -0.24
CLN5-201ENST00000377453 GHRHP01286 108 aa13.58□□□□□ -0.24
CLN5-201ENST00000377453 FBN1P35555 2871 aaKnown RBP13.57□□□□□ -0.24
CLN5-201ENST00000377453 STAB1Q9NY15 2570 aa13.57□□□□□ -0.24
CLN5-201ENST00000377453 ZNF561-AS1K7EIQ3 104 aa13.57□□□□□ -0.24
CLN5-201ENST00000377453 UBL5Q9BZL1 73 aa13.57□□□□□ -0.24
CLN5-201ENST00000377453 OXLD1Q5BKU9 147 aa13.57□□□□□ -0.24
CLN5-201ENST00000377453 TENM3Q9P273 2699 aa13.56□□□□□ -0.24
CLN5-201ENST00000377453 HAMPP81172 84 aa13.55□□□□□ -0.24
CLN5-201ENST00000377453 CAMK2N2Q96S95 79 aa13.55□□□□□ -0.24
CLN5-201ENST00000377453 KPRPQ5T749 579 aaPredicted RBP13.54□□□□□ -0.24
CLN5-201ENST00000377453 Q6ZRU5 148 aa13.54□□□□□ -0.24
CLN5-201ENST00000377453 Q6ZTC4 211 aa13.54□□□□□ -0.24
CLN5-201ENST00000377453 SCXQ7RTU7 201 aa13.54□□□□□ -0.24
CLN5-201ENST00000377453 DIRC1Q969H9 104 aa13.54□□□□□ -0.24
CLN5-201ENST00000377453 ZNF73O43830 326 aaPredicted RBP13.53□□□□□ -0.24
CLN5-201ENST00000377453 ANK2Q01484 3957 aa13.51□□□□□ -0.25
CLN5-201ENST00000377453 DSCR8Q96T75 97 aa13.51□□□□□ -0.25
CLN5-201ENST00000377453 Q6ZVQ6 151 aa13.5□□□□□ -0.25
CLN5-201ENST00000377453 GVQW2A0A096LPI5 108 aaPredicted RBP13.49□□□□□ -0.25
CLN5-201ENST00000377453 VPREB1P12018 145 aa13.49□□□□□ -0.25
CLN5-201ENST00000377453 KRTAP26-1Q6PEX3 210 aa13.49□□□□□ -0.25
CLN5-201ENST00000377453 MAST4O15021 2626 aa13.49□□□□□ -0.25
CLN5-201ENST00000377453 COX7BP24311 80 aa13.49□□□□□ -0.25
CLN5-201ENST00000377453 LINC01547P58512 204 aaPredicted RBP13.49□□□□□ -0.25
CLN5-201ENST00000377453 C15orf56Q8N910 161 aa13.48□□□□□ -0.25
CLN5-201ENST00000377453 LOC110117498A0A087WWA1 95 aa13.48□□□□□ -0.25
CLN5-201ENST00000377453 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
CLN5-201ENST00000377453 ESRGQ1W209 222 aa13.47□□□□□ -0.25
CLN5-201ENST00000377453 ATP5EP2Q5VTU8 51 aa13.47□□□□□ -0.25
CLN5-201ENST00000377453 MUC7Q8TAX7 377 aa13.47□□□□□ -0.25
CLN5-201ENST00000377453 TRAV10A0A0B4J240 114 aa13.45□□□□□ -0.26
CLN5-201ENST00000377453 C20orf197Q8N268 126 aa13.45□□□□□ -0.26
CLN5-201ENST00000377453 BAHCC1Q9P281 2608 aa13.45□□□□□ -0.26
CLN5-201ENST00000377453 OXTP01178 125 aa13.44□□□□□ -0.26
CLN5-201ENST00000377453 ELOF1P60002 83 aaKnown RBP13.44□□□□□ -0.26
CLN5-201ENST00000377453 Q6ZRP5 223 aa13.43□□□□□ -0.26
CLN5-201ENST00000377453 IGKV2D-24A0A075B6R9 120 aa13.43□□□□□ -0.26
CLN5-201ENST00000377453 J3KT08 172 aa13.42□□□□□ -0.26
CLN5-201ENST00000377453 FAM19A5Q7Z5A7 132 aaPredicted RBP13.42□□□□□ -0.26
CLN5-201ENST00000377453 DPH3Q96FX2 82 aa13.4□□□□□ -0.26
CLN5-201ENST00000377453 COL6A5A8TX70 2615 aa13.4□□□□□ -0.27
CLN5-201ENST00000377453 EGFEM1PQ0D2K5 195 aa13.39□□□□□ -0.27
CLN5-201ENST00000377453 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.39□□□□□ -0.27
CLN5-201ENST00000377453 TRBV7-4A0A0J9YYF1 115 aa13.38□□□□□ -0.27
CLN5-201ENST00000377453 NDUFC2-KCTD14E9PQ53 114 aa13.38□□□□□ -0.27
CLN5-201ENST00000377453 M0R378 163 aa13.38□□□□□ -0.27
CLN5-201ENST00000377453 Q8N9L7 120 aa13.38□□□□□ -0.27
CLN5-201ENST00000377453 NOTCH1P46531 2555 aa13.37□□□□□ -0.27
CLN5-201ENST00000377453 TMEM258P61165 79 aa13.37□□□□□ -0.27
CLN5-201ENST00000377453 DEFB105AQ8NG35 78 aa13.37□□□□□ -0.27
CLN5-201ENST00000377453 C1orf43Q9BWL3 253 aa13.37□□□□□ -0.27
CLN5-201ENST00000377453 SERTAD4-AS1Q5TG53 156 aa13.36□□□□□ -0.27
CLN5-201ENST00000377453 LINC00528Q8N1L1 170 aa13.36□□□□□ -0.27
CLN5-201ENST00000377453 SNURFQ9Y675 71 aa13.35□□□□□ -0.27
CLN5-201ENST00000377453 WIPF1O43516 503 aa13.32□□□□□ -0.28
CLN5-201ENST00000377453 CASC10Q5T4H9 136 aa13.32□□□□□ -0.28
CLN5-201ENST00000377453 DEFB131BA0A096LNP1 70 aa13.32□□□□□ -0.28
CLN5-201ENST00000377453 RPL37AP8A6NKH3 93 aa13.31□□□□□ -0.28
CLN5-201ENST00000377453 FAM168BA1KXE4 195 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms