RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 MUC7Q8TAX7 377 aa14.45□□□□□ -0.1
RNF39-202ENST00000376751 MRAPQ8TCY5 172 aa14.45□□□□□ -0.1
RNF39-202ENST00000376751 DNAL4O96015 105 aa14.45□□□□□ -0.1
RNF39-202ENST00000376751 TMEM126AQ9H061 195 aa14.44□□□□□ -0.1
RNF39-202ENST00000376751 FAM240AA0A1B0GVK7 77 aa14.42□□□□□ -0.1
RNF39-202ENST00000376751 SLPIP03973 132 aa14.42□□□□□ -0.1
RNF39-202ENST00000376751 TRAV10A0A0B4J240 114 aa14.42□□□□□ -0.1
RNF39-202ENST00000376751 C15orf53Q8NAA6 179 aa14.42□□□□□ -0.1
RNF39-202ENST00000376751 ZNF561-AS1K7EIQ3 104 aa14.41□□□□□ -0.1
RNF39-202ENST00000376751 C9orf129Q5T035 196 aaKnown RBP14.41□□□□□ -0.1
RNF39-202ENST00000376751 CAMK2N2Q96S95 79 aa14.4□□□□□ -0.1
RNF39-202ENST00000376751 C1orf43Q9BWL3 253 aa14.4□□□□□ -0.1
RNF39-202ENST00000376751 XAGE1AQ9HD64 81 aa14.4□□□□□ -0.1
RNF39-202ENST00000376751 DNAH10OSP0CZ25 163 aa14.39□□□□□ -0.11
RNF39-202ENST00000376751 Q6ZRU5 148 aa14.39□□□□□ -0.11
RNF39-202ENST00000376751 IGKV2D-24A0A075B6R9 120 aa14.38□□□□□ -0.11
RNF39-202ENST00000376751 RPL18AQ02543 176 aaKnown RBP14.38□□□□□ -0.11
RNF39-202ENST00000376751 S100A7L2Q5SY68 101 aa14.38□□□□□ -0.11
RNF39-202ENST00000376751 C6orf99Q4VX62 202 aa14.37□□□□□ -0.11
RNF39-202ENST00000376751 LINC00167Q96N53 147 aa14.37□□□□□ -0.11
RNF39-202ENST00000376751 LINC00588Q9Y4M8 146 aa14.37□□□□□ -0.11
RNF39-202ENST00000376751 IGLV6-57P01721 117 aa14.36□□□□□ -0.11
RNF39-202ENST00000376751 TTC32Q5I0X7 151 aa14.34□□□□□ -0.11
RNF39-202ENST00000376751 Q8N814 137 aa14.34□□□□□ -0.11
RNF39-202ENST00000376751 C2orf48Q96LS8 159 aa14.34□□□□□ -0.11
RNF39-202ENST00000376751 SNCGO76070 127 aa14.33□□□□□ -0.12
RNF39-202ENST00000376751 ORMDL1Q9P0S3 153 aa14.33□□□□□ -0.12
RNF39-202ENST00000376751 INAFM2P0DMQ5 153 aa14.33□□□□□ -0.12
RNF39-202ENST00000376751 OBSCN-AS1Q96MR7 158 aa14.33□□□□□ -0.12
RNF39-202ENST00000376751 A0A1B0GX51 115 aa14.32□□□□□ -0.12
RNF39-202ENST00000376751 TRBV10-3A0A0K0K1G6 114 aa14.31□□□□□ -0.12
RNF39-202ENST00000376751 DNAH1Q9P2D7 4330 aa14.3□□□□□ -0.12
RNF39-202ENST00000376751 SMCR5Q8TEV8 140 aa14.29□□□□□ -0.12
RNF39-202ENST00000376751 C14orf132Q9NPU4 83 aa14.29□□□□□ -0.12
RNF39-202ENST00000376751 STAB2Q8WWQ8 2551 aa14.29□□□□□ -0.12
RNF39-202ENST00000376751 ACYP1P07311 99 aa14.29□□□□□ -0.12
RNF39-202ENST00000376751 VPREB1P12018 145 aa14.29□□□□□ -0.12
RNF39-202ENST00000376751 NDUFC2-KCTD14E9PQ53 114 aa14.28□□□□□ -0.12
RNF39-202ENST00000376751 LINC00575Q6W349 94 aa14.28□□□□□ -0.12
RNF39-202ENST00000376751 COL7A1Q02388 2944 aa14.28□□□□□ -0.12
RNF39-202ENST00000376751 GAGE2AQ6NT46 116 aa14.27□□□□□ -0.12
RNF39-202ENST00000376751 CASC10Q5T4H9 136 aa14.27□□□□□ -0.13
RNF39-202ENST00000376751 A0A1B0GV72 72 aa14.26□□□□□ -0.13
RNF39-202ENST00000376751 SYCNQ0VAF6 134 aa14.25□□□□□ -0.13
RNF39-202ENST00000376751 GAGE2EQ4V326 116 aa14.25□□□□□ -0.13
RNF39-202ENST00000376751 Q6ZRP5 223 aa14.25□□□□□ -0.13
RNF39-202ENST00000376751 GAGE2DQ9UEU5 116 aa14.25□□□□□ -0.13
RNF39-202ENST00000376751 TRAV23DV6A0A075B6W5 121 aa14.24□□□□□ -0.13
RNF39-202ENST00000376751 GAGE2BQ13066 116 aa14.24□□□□□ -0.13
RNF39-202ENST00000376751 MDFIQ99750 246 aa14.24□□□□□ -0.13
RNF39-202ENST00000376751 DNAH9Q9NYC9 4486 aa14.23□□□□□ -0.13
RNF39-202ENST00000376751 F8WDY8 70 aa14.23□□□□□ -0.13
RNF39-202ENST00000376751 SDIM1Q6ZPB5 146 aa14.23□□□□□ -0.13
RNF39-202ENST00000376751 Q6Q795 121 aa14.21□□□□□ -0.13
RNF39-202ENST00000376751 hADV29S1A0JD25 119 aa14.2□□□□□ -0.14
RNF39-202ENST00000376751 DIRC1Q969H9 104 aa14.2□□□□□ -0.14
RNF39-202ENST00000376751 USP17L23D6RBM5 183 aa14.19□□□□□ -0.14
RNF39-202ENST00000376751 M0R378 163 aa14.19□□□□□ -0.14
RNF39-202ENST00000376751 TMEM256-PLSCR3K7ERE1 68 aa14.18□□□□□ -0.14
RNF39-202ENST00000376751 ZNF73O43830 326 aaPredicted RBP14.18□□□□□ -0.14
RNF39-202ENST00000376751 UPK3BQ9BT76 320 aa14.18□□□□□ -0.14
RNF39-202ENST00000376751 TRBV7-7A0A0K0K1E9 115 aa14.16□□□□□ -0.14
RNF39-202ENST00000376751 LINC00643Q86TS7 51 aa14.16□□□□□ -0.14
RNF39-202ENST00000376751 COX7BP24311 80 aa14.13□□□□□ -0.15
RNF39-202ENST00000376751 SERTAD4-AS1Q5TG53 156 aa14.13□□□□□ -0.15
RNF39-202ENST00000376751 ELOF1P60002 83 aaKnown RBP14.13□□□□□ -0.15
RNF39-202ENST00000376751 Q6ZQY7 126 aa14.13□□□□□ -0.15
RNF39-202ENST00000376751 JMJD7-PLA2G4BH0Y9G9 81 aa14.12□□□□□ -0.15
RNF39-202ENST00000376751 RMI2Q96E14 147 aa14.12□□□□□ -0.15
RNF39-202ENST00000376751 LYSTQ99698 3801 aa14.12□□□□□ -0.15
RNF39-202ENST00000376751 DYNC2H1Q8NCM8 4307 aaKnown RBP14.12□□□□□ -0.15
RNF39-202ENST00000376751 NDUFV3P56181 108 aaKnown RBP14.11□□□□□ -0.15
RNF39-202ENST00000376751 LINC00846Q9NV44 126 aa14.11□□□□□ -0.15
RNF39-202ENST00000376751 TLX1NBP0CAT3 122 aa14.11□□□□□ -0.15
RNF39-202ENST00000376751 CCKP06307 115 aa14.1□□□□□ -0.15
RNF39-202ENST00000376751 KRTAP1-5Q9BYS1 174 aa14.1□□□□□ -0.15
RNF39-202ENST00000376751 TRBV7-6A0A0J9YX20 115 aa14.09□□□□□ -0.15
RNF39-202ENST00000376751 NHLRC4P0CG21 123 aaPredicted RBP14.09□□□□□ -0.15
RNF39-202ENST00000376751 ANAPC13Q9BS18 74 aa14.09□□□□□ -0.15
RNF39-202ENST00000376751 C7orf33Q8WU49 177 aa14.07□□□□□ -0.16
RNF39-202ENST00000376751 LINC00528Q8N1L1 170 aa14.05□□□□□ -0.16
RNF39-202ENST00000376751 NKAPP1Q8N9T2 125 aa14.05□□□□□ -0.16
RNF39-202ENST00000376751 B9D2Q9BPU9 175 aa14.05□□□□□ -0.16
RNF39-202ENST00000376751 FAM168BA1KXE4 195 aa14.05□□□□□ -0.16
RNF39-202ENST00000376751 DNAH10Q8IVF4 4471 aa14.05□□□□□ -0.16
RNF39-202ENST00000376751 APLNQ9ULZ1 77 aa14.04□□□□□ -0.16
RNF39-202ENST00000376751 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.03□□□□□ -0.16
RNF39-202ENST00000376751 IMUPQ9GZP8 106 aa14.03□□□□□ -0.16
RNF39-202ENST00000376751 LAMTOR3Q9UHA4 124 aa14.03□□□□□ -0.16
RNF39-202ENST00000376751 PLA2G2DQ9UNK4 145 aa14.02□□□□□ -0.16
RNF39-202ENST00000376751 KRTAP7-1Q8IUC3 87 aa14.02□□□□□ -0.17
RNF39-202ENST00000376751 KCNQ1DNQ9H478 68 aa14.02□□□□□ -0.17
RNF39-202ENST00000376751 CSMD3Q7Z407 3707 aa14.01□□□□□ -0.17
RNF39-202ENST00000376751 RBM3P98179 157 aaKnown RBP14.01□□□□□ -0.17
RNF39-202ENST00000376751 Q6ZQT0 140 aa14□□□□□ -0.17
RNF39-202ENST00000376751 TENM2Q9NT68 2774 aa13.99□□□□□ -0.17
RNF39-202ENST00000376751 IGLV5-37A0A075B6J1 123 aa13.98□□□□□ -0.17
RNF39-202ENST00000376751 Q6JHZ5 121 aa13.98□□□□□ -0.17
RNF39-202ENST00000376751 LOC110117498A0A087WWA1 95 aa13.98□□□□□ -0.17
RNF39-202ENST00000376751 H3BQ85 93 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms