RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 SOSTDC1Q6X4U4 206 aa13.06□□□□□ -0.32
NELFE-202ENST00000375429 C2orf91Q6ZV80 131 aa13.06□□□□□ -0.32
NELFE-202ENST00000375429 KRTAP7-1Q8IUC3 87 aa13.06□□□□□ -0.32
NELFE-202ENST00000375429 SPANXDQ9BXN6 97 aa13.06□□□□□ -0.32
NELFE-202ENST00000375429 SPANXCQ9NY87 97 aa13.06□□□□□ -0.32
NELFE-202ENST00000375429 HAMPP81172 84 aa13.05□□□□□ -0.32
NELFE-202ENST00000375429 LOC107984156A0A0G2JMH3 177 aa13.04□□□□□ -0.32
NELFE-202ENST00000375429 SERTAD4-AS1Q5TG53 156 aa13.04□□□□□ -0.32
NELFE-202ENST00000375429 ARL17AQ8IVW1 177 aa13.04□□□□□ -0.32
NELFE-202ENST00000375429 SPANXB1Q9NS25 103 aaPredicted RBP13.04□□□□□ -0.32
NELFE-202ENST00000375429 UQCR10Q9UDW1 63 aa13.04□□□□□ -0.32
NELFE-202ENST00000375429 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
NELFE-202ENST00000375429 Q8NDZ9 215 aa13.03□□□□□ -0.32
NELFE-202ENST00000375429 CIRBP-AS1Q8TBR5 109 aa13.03□□□□□ -0.32
NELFE-202ENST00000375429 LINC00308Q8TCZ7 52 aa13.03□□□□□ -0.32
NELFE-202ENST00000375429 XGP55808 180 aa13.03□□□□□ -0.32
NELFE-202ENST00000375429 PLAC8Q9NZF1 115 aa13.03□□□□□ -0.32
NELFE-202ENST00000375429 HIGD1BQ9P298 99 aa13.03□□□□□ -0.32
NELFE-202ENST00000375429 SRSF9Q13242 221 aaKnown RBP eCLIP13.02□□□□□ -0.33
NELFE-202ENST00000375429 Q6ZVH6 145 aa13.02□□□□□ -0.33
NELFE-202ENST00000375429 FAM19A5Q7Z5A7 132 aaPredicted RBP13.02□□□□□ -0.33
NELFE-202ENST00000375429 PLA2G2DQ9UNK4 145 aa13.02□□□□□ -0.33
NELFE-202ENST00000375429 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
NELFE-202ENST00000375429 MIEN1Q9BRT3 115 aa13.01□□□□□ -0.33
NELFE-202ENST00000375429 APOBP04114 4563 aaKnown RBP13.01□□□□□ -0.33
NELFE-202ENST00000375429 MUSTN1Q8IVN3 82 aa13□□□□□ -0.33
NELFE-202ENST00000375429 VPREB1P12018 145 aa12.99□□□□□ -0.33
NELFE-202ENST00000375429 IFITM1P13164 125 aa12.98□□□□□ -0.33
NELFE-202ENST00000375429 PRR3P79522 188 aaKnown RBP12.98□□□□□ -0.33
NELFE-202ENST00000375429 HIST1H4GQ99525 98 aa12.98□□□□□ -0.33
NELFE-202ENST00000375429 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
NELFE-202ENST00000375429 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
NELFE-202ENST00000375429 IGLV5-37A0A075B6J1 123 aa12.96□□□□□ -0.33
NELFE-202ENST00000375429 TSTD3H0UI37 97 aa12.95□□□□□ -0.34
NELFE-202ENST00000375429 M0QXV9 152 aa12.94□□□□□ -0.34
NELFE-202ENST00000375429 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
NELFE-202ENST00000375429 PPDPFQ9H3Y8 114 aa12.94□□□□□ -0.34
NELFE-202ENST00000375429 NDUFC2O95298 119 aa12.94□□□□□ -0.34
NELFE-202ENST00000375429 COPS9Q8WXC6 57 aa12.94□□□□□ -0.34
NELFE-202ENST00000375429 CDK2AP2O75956 126 aa12.93□□□□□ -0.34
NELFE-202ENST00000375429 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
NELFE-202ENST00000375429 NKAPP1Q8N9T2 125 aa12.93□□□□□ -0.34
NELFE-202ENST00000375429 NCR3O14931 201 aa12.91□□□□□ -0.34
NELFE-202ENST00000375429 TAL2Q16559 108 aa12.91□□□□□ -0.34
NELFE-202ENST00000375429 MRPL55Q7Z7F7 128 aaKnown RBP12.9□□□□□ -0.34
NELFE-202ENST00000375429 GAGE10A6NGK3 116 aa12.9□□□□□ -0.35
NELFE-202ENST00000375429 C7orf33Q8WU49 177 aa12.9□□□□□ -0.35
NELFE-202ENST00000375429 LINC00167Q96N53 147 aa12.9□□□□□ -0.35
NELFE-202ENST00000375429 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
NELFE-202ENST00000375429 A4D1N5 150 aa12.89□□□□□ -0.35
NELFE-202ENST00000375429 M0R378 163 aa12.89□□□□□ -0.35
NELFE-202ENST00000375429 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
NELFE-202ENST00000375429 HSD52Q0P140 79 aa12.88□□□□□ -0.35
NELFE-202ENST00000375429 LBHQ53QV2 105 aaPredicted RBP12.88□□□□□ -0.35
NELFE-202ENST00000375429 CEND1Q8N111 149 aa12.88□□□□□ -0.35
NELFE-202ENST00000375429 TRBV10-2A0A0K0K1G8 114 aa12.87□□□□□ -0.35
NELFE-202ENST00000375429 SMR3BP02814 79 aaPredicted RBP12.87□□□□□ -0.35
NELFE-202ENST00000375429 KRTAP11-1Q8IUC1 163 aa12.87□□□□□ -0.35
NELFE-202ENST00000375429 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
NELFE-202ENST00000375429 HSPG2P98160 4391 aa12.86□□□□□ -0.35
NELFE-202ENST00000375429 RPL37AP8A6NKH3 93 aa12.86□□□□□ -0.35
NELFE-202ENST00000375429 RYR1P21817 5038 aa12.85□□□□□ -0.35
NELFE-202ENST00000375429 CTAG1AP78358 180 aa12.85□□□□□ -0.35
NELFE-202ENST00000375429 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
NELFE-202ENST00000375429 UBE2BP63146 152 aa12.84□□□□□ -0.35
NELFE-202ENST00000375429 FXYD2P54710 66 aa12.83□□□□□ -0.36
NELFE-202ENST00000375429 LINC00337Q8N6G1 96 aa12.83□□□□□ -0.36
NELFE-202ENST00000375429 IGLV1-50A0A075B6I6 118 aa12.82□□□□□ -0.36
NELFE-202ENST00000375429 TRBV10-3A0A0K0K1G6 114 aa12.81□□□□□ -0.36
NELFE-202ENST00000375429 S100A7L2Q5SY68 101 aa12.81□□□□□ -0.36
NELFE-202ENST00000375429 IGLV6-57P01721 117 aa12.8□□□□□ -0.36
NELFE-202ENST00000375429 DDTP30046 118 aa12.8□□□□□ -0.36
NELFE-202ENST00000375429 LINC00528Q8N1L1 170 aa12.8□□□□□ -0.36
NELFE-202ENST00000375429 OR13C6PQ8NH95 151 aa12.8□□□□□ -0.36
NELFE-202ENST00000375429 CFC1BP0CG36 223 aa12.79□□□□□ -0.36
NELFE-202ENST00000375429 CFC1P0CG37 223 aa12.79□□□□□ -0.36
NELFE-202ENST00000375429 BVES-AS1Q5T3Y7 98 aa12.77□□□□□ -0.36
NELFE-202ENST00000375429 KRTAP17-1Q9BYP8 105 aa12.77□□□□□ -0.36
NELFE-202ENST00000375429 TMEM126AQ9H061 195 aa12.77□□□□□ -0.36
NELFE-202ENST00000375429 PSORS1C2Q9UIG4 136 aa12.77□□□□□ -0.36
NELFE-202ENST00000375429 TMEM238LA0A1B0GVL6 79 aa12.77□□□□□ -0.37
NELFE-202ENST00000375429 A6NDN8 102 aa12.77□□□□□ -0.37
NELFE-202ENST00000375429 A6NJY4 79 aa12.77□□□□□ -0.37
NELFE-202ENST00000375429 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
NELFE-202ENST00000375429 HINT1P49773 126 aaPredicted RBP12.76□□□□□ -0.37
NELFE-202ENST00000375429 FAT1Q14517 4588 aa12.75□□□□□ -0.37
NELFE-202ENST00000375429 KCNQ1DNQ9H478 68 aa12.75□□□□□ -0.37
NELFE-202ENST00000375429 VPS13BQ7Z7G8 4022 aa12.73□□□□□ -0.37
NELFE-202ENST00000375429 A0A0B4J2C4 111 aa12.73□□□□□ -0.37
NELFE-202ENST00000375429 NHP2Q9NX24 153 aaKnown RBP12.73□□□□□ -0.37
NELFE-202ENST00000375429 RPL37AP61513 92 aaKnown RBP12.72□□□□□ -0.37
NELFE-202ENST00000375429 REG3GQ6UW15 175 aa12.72□□□□□ -0.37
NELFE-202ENST00000375429 RAB37Q96AX2 223 aa12.72□□□□□ -0.37
NELFE-202ENST00000375429 TRAV23DV6A0A075B6W5 121 aa12.71□□□□□ -0.37
NELFE-202ENST00000375429 M0R143 59 aa12.71□□□□□ -0.37
NELFE-202ENST00000375429 PRYO14603 147 aa12.71□□□□□ -0.37
NELFE-202ENST00000375429 C1orf137Q5JT78 98 aa12.71□□□□□ -0.37
NELFE-202ENST00000375429 FAM229AH3BQW9 127 aa12.7□□□□□ -0.38
NELFE-202ENST00000375429 RPL13AP40429 203 aaKnown RBP12.7□□□□□ -0.38
NELFE-202ENST00000375429 SPRR1AP35321 89 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms