RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
PFDN6-201ENST00000374606 Q6ZVH6 145 aa11.25□□□□□ -0.61
PFDN6-201ENST00000374606 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
PFDN6-201ENST00000374606 SND1-IT1Q9HBX3 110 aa11.25□□□□□ -0.61
PFDN6-201ENST00000374606 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
PFDN6-201ENST00000374606 GCSHP23434 173 aa11.24□□□□□ -0.61
PFDN6-201ENST00000374606 NPC2P61916 151 aa11.24□□□□□ -0.61
PFDN6-201ENST00000374606 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
PFDN6-201ENST00000374606 COPS9Q8WXC6 57 aa11.23□□□□□ -0.61
PFDN6-201ENST00000374606 XAGE1AQ9HD64 81 aa11.23□□□□□ -0.61
PFDN6-201ENST00000374606 A0A096LNI7 61 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 IFITM1P13164 125 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 DDTP30046 118 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 HSD52Q0P140 79 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 TAL2Q16559 108 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 SDIM1Q6ZPB5 146 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
PFDN6-201ENST00000374606 IGKV2-24A0A0C4DH68 120 aa11.21□□□□□ -0.61
PFDN6-201ENST00000374606 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
PFDN6-201ENST00000374606 CTAG1AP78358 180 aa11.19□□□□□ -0.62
PFDN6-201ENST00000374606 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
PFDN6-201ENST00000374606 MUSTN1Q8IVN3 82 aa11.19□□□□□ -0.62
PFDN6-201ENST00000374606 MYCBP2O75592 4640 aa11.18□□□□□ -0.62
PFDN6-201ENST00000374606 FAT1Q14517 4588 aa11.18□□□□□ -0.62
PFDN6-201ENST00000374606 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
PFDN6-201ENST00000374606 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
PFDN6-201ENST00000374606 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
PFDN6-201ENST00000374606 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
PFDN6-201ENST00000374606 PCP4L1A6NKN8 68 aa11.17□□□□□ -0.62
PFDN6-201ENST00000374606 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
PFDN6-201ENST00000374606 CHTF8P0CG12 524 aa11.17□□□□□ -0.62
PFDN6-201ENST00000374606 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
PFDN6-201ENST00000374606 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
PFDN6-201ENST00000374606 CEND1Q8N111 149 aa11.17□□□□□ -0.62
PFDN6-201ENST00000374606 Q5VSD8 79 aa11.16□□□□□ -0.62
PFDN6-201ENST00000374606 FLG2Q5D862 2391 aaPredicted RBP11.15□□□□□ -0.62
PFDN6-201ENST00000374606 M0R143 59 aa11.14□□□□□ -0.63
PFDN6-201ENST00000374606 SPACA4Q8TDM5 124 aa11.14□□□□□ -0.63
PFDN6-201ENST00000374606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
PFDN6-201ENST00000374606 TMEM238LA0A1B0GVL6 79 aa11.13□□□□□ -0.63
PFDN6-201ENST00000374606 A4D1N5 150 aa11.13□□□□□ -0.63
PFDN6-201ENST00000374606 A6NJY4 79 aa11.13□□□□□ -0.63
PFDN6-201ENST00000374606 KRTAP10-1P60331 282 aa11.13□□□□□ -0.63
PFDN6-201ENST00000374606 PLA2G2DQ9UNK4 145 aa11.13□□□□□ -0.63
PFDN6-201ENST00000374606 PANO1I0J062 215 aa11.12□□□□□ -0.63
PFDN6-201ENST00000374606 NDUFC2O95298 119 aa11.12□□□□□ -0.63
PFDN6-201ENST00000374606 FXYD2P54710 66 aa11.12□□□□□ -0.63
PFDN6-201ENST00000374606 XGP55808 180 aa11.12□□□□□ -0.63
PFDN6-201ENST00000374606 FAM19A5Q7Z5A7 132 aaPredicted RBP11.12□□□□□ -0.63
PFDN6-201ENST00000374606 FAM168BA1KXE4 195 aa11.11□□□□□ -0.63
PFDN6-201ENST00000374606 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
PFDN6-201ENST00000374606 Q8NDZ9 215 aa11.11□□□□□ -0.63
PFDN6-201ENST00000374606 VPREB1P12018 145 aa11.1□□□□□ -0.63
PFDN6-201ENST00000374606 BVES-AS1Q5T3Y7 98 aa11.1□□□□□ -0.63
PFDN6-201ENST00000374606 SERTAD4-AS1Q5TG53 156 aa11.1□□□□□ -0.63
PFDN6-201ENST00000374606 NKAPP1Q8N9T2 125 aa11.1□□□□□ -0.63
PFDN6-201ENST00000374606 DPH3Q96FX2 82 aa11.1□□□□□ -0.63
PFDN6-201ENST00000374606 NCR3O14931 201 aa11.09□□□□□ -0.63
PFDN6-201ENST00000374606 IGLV5-37A0A075B6J1 123 aa11.07□□□□□ -0.64
PFDN6-201ENST00000374606 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
PFDN6-201ENST00000374606 Q6ZSA8 131 aa11.07□□□□□ -0.64
PFDN6-201ENST00000374606 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
PFDN6-201ENST00000374606 A0A087WYN8 130 aa11.06□□□□□ -0.64
PFDN6-201ENST00000374606 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
PFDN6-201ENST00000374606 M0QXV9 152 aa11.06□□□□□ -0.64
PFDN6-201ENST00000374606 PRR3P79522 188 aaKnown RBP11.06□□□□□ -0.64
PFDN6-201ENST00000374606 BATFQ16520 125 aa11.06□□□□□ -0.64
PFDN6-201ENST00000374606 KRTAP7-1Q8IUC3 87 aa11.06□□□□□ -0.64
PFDN6-201ENST00000374606 IGKV2-28A0A075B6P5 120 aa11.05□□□□□ -0.64
PFDN6-201ENST00000374606 IGKV2D-28P01615 120 aa11.05□□□□□ -0.64
PFDN6-201ENST00000374606 FAM30AQ9NZY2 134 aa11.05□□□□□ -0.64
PFDN6-201ENST00000374606 SRRM2Q9UQ35 2752 aaKnown RBP11.04□□□□□ -0.64
PFDN6-201ENST00000374606 A0A0B4J2C4 111 aa11.04□□□□□ -0.64
PFDN6-201ENST00000374606 A6NDN8 102 aa11.04□□□□□ -0.64
PFDN6-201ENST00000374606 M0R378 163 aa11.04□□□□□ -0.64
PFDN6-201ENST00000374606 RAB37Q96AX2 223 aa11.04□□□□□ -0.64
PFDN6-201ENST00000374606 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
PFDN6-201ENST00000374606 TRAV13-2A0A0B4J235 113 aa11.03□□□□□ -0.64
PFDN6-201ENST00000374606 J3QL48 77 aa11.03□□□□□ -0.64
PFDN6-201ENST00000374606 CFC1BP0CG36 223 aa11.03□□□□□ -0.64
PFDN6-201ENST00000374606 CFC1P0CG37 223 aa11.03□□□□□ -0.64
PFDN6-201ENST00000374606 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
PFDN6-201ENST00000374606 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
PFDN6-201ENST00000374606 S100A7L2Q5SY68 101 aa11.02□□□□□ -0.65
PFDN6-201ENST00000374606 LINC00337Q8N6G1 96 aa11.02□□□□□ -0.65
PFDN6-201ENST00000374606 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
PFDN6-201ENST00000374606 C7orf33Q8WU49 177 aa11.02□□□□□ -0.65
PFDN6-201ENST00000374606 GAGE10A6NGK3 116 aa11.01□□□□□ -0.65
PFDN6-201ENST00000374606 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
PFDN6-201ENST00000374606 K7ERJ3 54 aa11.01□□□□□ -0.65
PFDN6-201ENST00000374606 SMR3BP02814 79 aaPredicted RBP11.01□□□□□ -0.65
PFDN6-201ENST00000374606 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
PFDN6-201ENST00000374606 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
PFDN6-201ENST00000374606 A0A1B0GWB2 263 aa11□□□□□ -0.65
PFDN6-201ENST00000374606 RPL13AP40429 203 aaKnown RBP11□□□□□ -0.65
PFDN6-201ENST00000374606 PHF5AQ7RTV0 110 aaKnown RBP11□□□□□ -0.65
PFDN6-201ENST00000374606 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
PFDN6-201ENST00000374606 CIRBP-AS1Q8TBR5 109 aa10.99□□□□□ -0.65
PFDN6-201ENST00000374606 TRBV10-3A0A0K0K1G6 114 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms