RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 HSD52Q0P140 79 aa7.02□□□□□ -1.29
CSGALNACT2-201ENST00000374466 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
CSGALNACT2-201ENST00000374466 ATOH7Q8N100 152 aa7.01□□□□□ -1.29
CSGALNACT2-201ENST00000374466 SMIM13P0DJ93 91 aa7.01□□□□□ -1.29
CSGALNACT2-201ENST00000374466 LBHQ53QV2 105 aaPredicted RBP7.01□□□□□ -1.29
CSGALNACT2-201ENST00000374466 M0R378 163 aa7.01□□□□□ -1.29
CSGALNACT2-201ENST00000374466 XGP55808 180 aa7.01□□□□□ -1.29
CSGALNACT2-201ENST00000374466 KCNQ1DNQ9H478 68 aa7□□□□□ -1.29
CSGALNACT2-201ENST00000374466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
CSGALNACT2-201ENST00000374466 KRTAP4-16G5E9R7 235 aaPredicted RBP7□□□□□ -1.29
CSGALNACT2-201ENST00000374466 C12orf57Q99622 126 aa7□□□□□ -1.29
CSGALNACT2-201ENST00000374466 PRYO14603 147 aa6.99□□□□□ -1.29
CSGALNACT2-201ENST00000374466 MIR7-3HGQ8N6C7 128 aa6.99□□□□□ -1.29
CSGALNACT2-201ENST00000374466 TOMM7Q9P0U1 55 aa6.99□□□□□ -1.29
CSGALNACT2-201ENST00000374466 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
CSGALNACT2-201ENST00000374466 PAM16Q9Y3D7 125 aa6.99□□□□□ -1.29
CSGALNACT2-201ENST00000374466 CEND1Q8N111 149 aa6.98□□□□□ -1.29
CSGALNACT2-201ENST00000374466 IGLV1-50A0A075B6I6 118 aa6.98□□□□□ -1.29
CSGALNACT2-201ENST00000374466 LECT2O14960 151 aa6.98□□□□□ -1.29
CSGALNACT2-201ENST00000374466 LINC00337Q8N6G1 96 aa6.97□□□□□ -1.29
CSGALNACT2-201ENST00000374466 IGKV2-28A0A075B6P5 120 aa6.97□□□□□ -1.29
CSGALNACT2-201ENST00000374466 PANO1I0J062 215 aa6.97□□□□□ -1.29
CSGALNACT2-201ENST00000374466 IGKV2D-28P01615 120 aa6.97□□□□□ -1.29
CSGALNACT2-201ENST00000374466 Q8NDZ9 215 aa6.97□□□□□ -1.29
CSGALNACT2-201ENST00000374466 A0A1W2PNN7 141 aa6.97□□□□□ -1.29
CSGALNACT2-201ENST00000374466 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
CSGALNACT2-201ENST00000374466 CTAG1AP78358 180 aa6.96□□□□□ -1.3
CSGALNACT2-201ENST00000374466 BIRC6Q9NR09 4857 aa6.96□□□□□ -1.3
CSGALNACT2-201ENST00000374466 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
CSGALNACT2-201ENST00000374466 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
CSGALNACT2-201ENST00000374466 HSPG2P98160 4391 aa6.95□□□□□ -1.3
CSGALNACT2-201ENST00000374466 TRAV13-2A0A0B4J235 113 aa6.95□□□□□ -1.3
CSGALNACT2-201ENST00000374466 LINC00158P58513 81 aa6.95□□□□□ -1.3
CSGALNACT2-201ENST00000374466 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
CSGALNACT2-201ENST00000374466 RYR1P21817 5038 aa6.95□□□□□ -1.3
CSGALNACT2-201ENST00000374466 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 C22orf24Q9Y442 160 aa6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 A0A087WYN8 130 aa6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 A6NJY4 79 aa6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 MUSTN1Q8IVN3 82 aa6.94□□□□□ -1.3
CSGALNACT2-201ENST00000374466 EIF4EBP3O60516 100 aaPredicted RBP6.93□□□□□ -1.3
CSGALNACT2-201ENST00000374466 SCXQ7RTU7 201 aa6.93□□□□□ -1.3
CSGALNACT2-201ENST00000374466 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
CSGALNACT2-201ENST00000374466 SCGB1D4Q6XE38 83 aa6.93□□□□□ -1.3
CSGALNACT2-201ENST00000374466 C14orf144Q96I85 54 aa6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 SRSF9Q13242 221 aaKnown RBP eCLIP6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 A0A1B0GX51 115 aa6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 M0R143 59 aa6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 RPL28P46779 137 aaKnown RBP6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
CSGALNACT2-201ENST00000374466 A4D1N5 150 aa6.91□□□□□ -1.3
CSGALNACT2-201ENST00000374466 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
CSGALNACT2-201ENST00000374466 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
CSGALNACT2-201ENST00000374466 LINC01600Q96MT4 127 aa6.9□□□□□ -1.3
CSGALNACT2-201ENST00000374466 M0QXV9 152 aa6.9□□□□□ -1.31
CSGALNACT2-201ENST00000374466 DDTP30046 118 aa6.9□□□□□ -1.31
CSGALNACT2-201ENST00000374466 PFN2P35080 140 aa6.9□□□□□ -1.31
CSGALNACT2-201ENST00000374466 LINC00167Q96N53 147 aa6.9□□□□□ -1.31
CSGALNACT2-201ENST00000374466 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
CSGALNACT2-201ENST00000374466 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
CSGALNACT2-201ENST00000374466 BCE1O60756 84 aa6.89□□□□□ -1.31
CSGALNACT2-201ENST00000374466 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
CSGALNACT2-201ENST00000374466 CFC1P0CG37 223 aa6.89□□□□□ -1.31
CSGALNACT2-201ENST00000374466 Q8N1X5 172 aa6.89□□□□□ -1.31
CSGALNACT2-201ENST00000374466 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
CSGALNACT2-201ENST00000374466 PPDPFLQ8WWR9 84 aa6.88□□□□□ -1.31
CSGALNACT2-201ENST00000374466 HERC2O95714 4834 aa6.87□□□□□ -1.31
CSGALNACT2-201ENST00000374466 CHTF8P0CG12 524 aa6.87□□□□□ -1.31
CSGALNACT2-201ENST00000374466 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
CSGALNACT2-201ENST00000374466 SPRR1BP22528 89 aa6.87□□□□□ -1.31
CSGALNACT2-201ENST00000374466 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 B5MCH6 92 aa6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 ELOF1P60002 83 aaKnown RBP6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 H3BQ85 93 aa6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 GAGE2EQ4V326 116 aa6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 GAGE2DQ9UEU5 116 aa6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
CSGALNACT2-201ENST00000374466 XAGE1AQ9HD64 81 aa6.85□□□□□ -1.31
CSGALNACT2-201ENST00000374466 REG3GQ6UW15 175 aa6.85□□□□□ -1.31
CSGALNACT2-201ENST00000374466 SPINK6Q6UWN8 80 aa6.85□□□□□ -1.31
CSGALNACT2-201ENST00000374466 FXYD2P54710 66 aa6.85□□□□□ -1.31
CSGALNACT2-201ENST00000374466 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
CSGALNACT2-201ENST00000374466 TRAV23DV6A0A075B6W5 121 aa6.84□□□□□ -1.31
CSGALNACT2-201ENST00000374466 PCP4L1A6NKN8 68 aa6.84□□□□□ -1.31
CSGALNACT2-201ENST00000374466 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
CSGALNACT2-201ENST00000374466 PRO1854Q9UHT4 67 aa6.84□□□□□ -1.31
CSGALNACT2-201ENST00000374466 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
CSGALNACT2-201ENST00000374466 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
CSGALNACT2-201ENST00000374466 A6NDN8 102 aa6.83□□□□□ -1.32
CSGALNACT2-201ENST00000374466 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
CSGALNACT2-201ENST00000374466 PHF5AQ7RTV0 110 aaKnown RBP6.83□□□□□ -1.32
CSGALNACT2-201ENST00000374466 Q6ZRX8 168 aa6.83□□□□□ -1.32
CSGALNACT2-201ENST00000374466 DAND5Q8N907 189 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms