RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 GTF2H5Q6ZYL4 71 aa17.17■□□□□ 0.34
ATPAF1-202ENST00000371937 SPCS1Q9Y6A9 102 aa17.17■□□□□ 0.34
ATPAF1-202ENST00000371937 GAGE10A6NGK3 116 aa17.16■□□□□ 0.34
ATPAF1-202ENST00000371937 UBE2V1Q13404 147 aa17.15■□□□□ 0.34
ATPAF1-202ENST00000371937 LINC00337Q8N6G1 96 aa17.15■□□□□ 0.34
ATPAF1-202ENST00000371937 LINC00476Q8WZB0 136 aa17.15■□□□□ 0.34
ATPAF1-202ENST00000371937 TLX1NBP0CAT3 122 aa17.14■□□□□ 0.34
ATPAF1-202ENST00000371937 K7EP34 96 aa17.14■□□□□ 0.33
ATPAF1-202ENST00000371937 XAGE1AQ9HD64 81 aa17.14■□□□□ 0.33
ATPAF1-202ENST00000371937 Q6ZRP5 223 aa17.12■□□□□ 0.33
ATPAF1-202ENST00000371937 SCGB1C2P0DMR2 95 aa17.12■□□□□ 0.33
ATPAF1-202ENST00000371937 CNBPP62633 177 aaKnown RBP17.12■□□□□ 0.33
ATPAF1-202ENST00000371937 LRCOL1A6NCL2 159 aa17.11■□□□□ 0.33
ATPAF1-202ENST00000371937 GAGE2EQ4V326 116 aa17.11■□□□□ 0.33
ATPAF1-202ENST00000371937 GAGE2DQ9UEU5 116 aa17.11■□□□□ 0.33
ATPAF1-202ENST00000371937 DNAH10Q8IVF4 4471 aa17.11■□□□□ 0.33
ATPAF1-202ENST00000371937 COX6CP09669 75 aa17.09■□□□□ 0.33
ATPAF1-202ENST00000371937 OR13C6PQ8NH95 151 aa17.09■□□□□ 0.33
ATPAF1-202ENST00000371937 TRIAP1O43715 76 aa17.08■□□□□ 0.33
ATPAF1-202ENST00000371937 PRR3P79522 188 aaKnown RBP17.08■□□□□ 0.33
ATPAF1-202ENST00000371937 RPL18AQ02543 176 aaKnown RBP17.07■□□□□ 0.32
ATPAF1-202ENST00000371937 Q8NDZ9 215 aa17.07■□□□□ 0.32
ATPAF1-202ENST00000371937 TRBV20-1A0A075B6N2 111 aa17.06■□□□□ 0.32
ATPAF1-202ENST00000371937 LOC107984640A0A0U1RRK4 108 aa17.05■□□□□ 0.32
ATPAF1-202ENST00000371937 TRBV10-2A0A0K0K1G8 114 aa17.05■□□□□ 0.32
ATPAF1-202ENST00000371937 TMEM126AQ9H061 195 aa17.05■□□□□ 0.32
ATPAF1-202ENST00000371937 NCR3O14931 201 aa17.04■□□□□ 0.32
ATPAF1-202ENST00000371937 C1orf134Q5TEV5 83 aa17.04■□□□□ 0.32
ATPAF1-202ENST00000371937 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.03■□□□□ 0.32
ATPAF1-202ENST00000371937 RPL28P46779 137 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-202ENST00000371937 S100A7L2Q5SY68 101 aa17.01■□□□□ 0.31
ATPAF1-202ENST00000371937 C9orf129Q5T035 196 aaKnown RBP17.01■□□□□ 0.31
ATPAF1-202ENST00000371937 VPREB1P12018 145 aa17■□□□□ 0.31
ATPAF1-202ENST00000371937 SMIM11BQ8TCY0 68 aa17■□□□□ 0.31
ATPAF1-202ENST00000371937 TCL1BO95988 128 aa16.99■□□□□ 0.31
ATPAF1-202ENST00000371937 H3BMG7 143 aa16.98■□□□□ 0.31
ATPAF1-202ENST00000371937 GAGE2BQ13066 116 aa16.98■□□□□ 0.31
ATPAF1-202ENST00000371937 Q8N814 137 aa16.98■□□□□ 0.31
ATPAF1-202ENST00000371937 KMT2AQ03164 3969 aa16.98■□□□□ 0.31
ATPAF1-202ENST00000371937 A0A087WTM6 91 aa16.98■□□□□ 0.31
ATPAF1-202ENST00000371937 ALMS1Q8TCU4 4167 aa16.96■□□□□ 0.31
ATPAF1-202ENST00000371937 PLA2G2DQ9UNK4 145 aa16.96■□□□□ 0.31
ATPAF1-202ENST00000371937 PKIGQ9Y2B9 76 aa16.96■□□□□ 0.3
ATPAF1-202ENST00000371937 M0R378 163 aa16.95■□□□□ 0.3
ATPAF1-202ENST00000371937 ATXN8Q156A1 80 aa16.95■□□□□ 0.3
ATPAF1-202ENST00000371937 IGLV6-57P01721 117 aa16.94■□□□□ 0.3
ATPAF1-202ENST00000371937 C9orf163Q8N9P6 203 aa16.93■□□□□ 0.3
ATPAF1-202ENST00000371937 DNAH6Q9C0G6 4158 aa16.93■□□□□ 0.3
ATPAF1-202ENST00000371937 C16orf90A8MZG2 172 aa16.92■□□□□ 0.3
ATPAF1-202ENST00000371937 NKAPP1Q8N9T2 125 aa16.91■□□□□ 0.3
ATPAF1-202ENST00000371937 CLEC2BQ92478 149 aa16.9■□□□□ 0.3
ATPAF1-202ENST00000371937 H0YGX0 51 aa16.89■□□□□ 0.29
ATPAF1-202ENST00000371937 TRBV10-3A0A0K0K1G6 114 aa16.89■□□□□ 0.29
ATPAF1-202ENST00000371937 SERTAD4-AS1Q5TG53 156 aa16.89■□□□□ 0.29
ATPAF1-202ENST00000371937 LST1O00453 97 aa16.88■□□□□ 0.29
ATPAF1-202ENST00000371937 DNAH2Q9P225 4427 aa16.87■□□□□ 0.29
ATPAF1-202ENST00000371937 A0A096LNI7 61 aa16.87■□□□□ 0.29
ATPAF1-202ENST00000371937 CBY1Q9Y3M2 126 aa16.87■□□□□ 0.29
ATPAF1-202ENST00000371937 IGLV5-37A0A075B6J1 123 aa16.86■□□□□ 0.29
ATPAF1-202ENST00000371937 F8W1H4 67 aa16.86■□□□□ 0.29
ATPAF1-202ENST00000371937 FAM168BA1KXE4 195 aa16.84■□□□□ 0.29
ATPAF1-202ENST00000371937 TRAV23DV6A0A075B6W5 121 aa16.83■□□□□ 0.28
ATPAF1-202ENST00000371937 IGKV2-24A0A0C4DH68 120 aa16.83■□□□□ 0.28
ATPAF1-202ENST00000371937 LINC01620Q4KN68 170 aa16.83■□□□□ 0.28
ATPAF1-202ENST00000371937 C6orf99Q4VX62 202 aa16.82■□□□□ 0.28
ATPAF1-202ENST00000371937 SDIM1Q6ZPB5 146 aa16.82■□□□□ 0.28
ATPAF1-202ENST00000371937 PRO0461Q9UI25 63 aa16.81■□□□□ 0.28
ATPAF1-202ENST00000371937 C7orf33Q8WU49 177 aa16.8■□□□□ 0.28
ATPAF1-202ENST00000371937 LINC00474Q9P2X8 69 aa16.8■□□□□ 0.28
ATPAF1-202ENST00000371937 FAM19A5Q7Z5A7 132 aaPredicted RBP16.8■□□□□ 0.28
ATPAF1-202ENST00000371937 C9JAW5 83 aa16.79■□□□□ 0.28
ATPAF1-202ENST00000371937 TRACP01848 142 aa16.79■□□□□ 0.28
ATPAF1-202ENST00000371937 MTURNQ8N3F0 131 aa16.79■□□□□ 0.28
ATPAF1-202ENST00000371937 C22orf24Q9Y442 160 aa16.79■□□□□ 0.28
ATPAF1-202ENST00000371937 KRTAP7-1Q8IUC3 87 aa16.78■□□□□ 0.28
ATPAF1-202ENST00000371937 FAM218AQ96MZ4 157 aa16.78■□□□□ 0.28
ATPAF1-202ENST00000371937 RTL8CO15255 209 aa16.77■□□□□ 0.28
ATPAF1-202ENST00000371937 ZNF73O43830 326 aaPredicted RBP16.77■□□□□ 0.27
ATPAF1-202ENST00000371937 TNP2Q05952 138 aa16.77■□□□□ 0.27
ATPAF1-202ENST00000371937 DIRC1Q969H9 104 aa16.77■□□□□ 0.27
ATPAF1-202ENST00000371937 MRPL55Q7Z7F7 128 aaKnown RBP16.76■□□□□ 0.27
ATPAF1-202ENST00000371937 SLC25A20O43772 301 aa16.75■□□□□ 0.27
ATPAF1-202ENST00000371937 KCNQ1DNQ9H478 68 aa16.74■□□□□ 0.27
ATPAF1-202ENST00000371937 LINC00167Q96N53 147 aa16.73■□□□□ 0.27
ATPAF1-202ENST00000371937 A0A087WYN8 130 aa16.73■□□□□ 0.27
ATPAF1-202ENST00000371937 TRBV7-6A0A0J9YX20 115 aa16.73■□□□□ 0.27
ATPAF1-202ENST00000371937 CHTF8P0CG12 524 aa16.73■□□□□ 0.27
ATPAF1-202ENST00000371937 DNAH17Q9UFH2 4485 aa16.72■□□□□ 0.27
ATPAF1-202ENST00000371937 IGLV5-52A0A0A0MRZ9 124 aa16.72■□□□□ 0.27
ATPAF1-202ENST00000371937 LCE6AA0A183 80 aa16.72■□□□□ 0.27
ATPAF1-202ENST00000371937 A0A1B0GX51 115 aa16.72■□□□□ 0.27
ATPAF1-202ENST00000371937 A0A1W2PNN7 141 aa16.72■□□□□ 0.27
ATPAF1-202ENST00000371937 SNCGO76070 127 aa16.72■□□□□ 0.27
ATPAF1-202ENST00000371937 IGLV1-50A0A075B6I6 118 aa16.71■□□□□ 0.27
ATPAF1-202ENST00000371937 SMCPP49901 116 aaPredicted RBP16.71■□□□□ 0.27
ATPAF1-202ENST00000371937 M0QXV9 152 aa16.7■□□□□ 0.26
ATPAF1-202ENST00000371937 DNAL4O96015 105 aa16.7■□□□□ 0.26
ATPAF1-202ENST00000371937 RPL37AP8A6NKH3 93 aa16.68■□□□□ 0.26
ATPAF1-202ENST00000371937 ANKRD29Q8N6D5 301 aa16.68■□□□□ 0.26
ATPAF1-202ENST00000371937 H3BT86 120 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms