RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
USF1-202ENST00000368020 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
USF1-202ENST00000368020 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
USF1-202ENST00000368020 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
USF1-202ENST00000368020 XGP55808 180 aa9.42□□□□□ -0.9
USF1-202ENST00000368020 ESRGQ1W209 222 aa9.42□□□□□ -0.9
USF1-202ENST00000368020 C2orf48Q96LS8 159 aa9.41□□□□□ -0.9
USF1-202ENST00000368020 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
USF1-202ENST00000368020 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
USF1-202ENST00000368020 A0A1B0GV72 72 aa9.4□□□□□ -0.9
USF1-202ENST00000368020 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
USF1-202ENST00000368020 S100A7L2Q5SY68 101 aa9.4□□□□□ -0.9
USF1-202ENST00000368020 A0A087WYN8 130 aa9.39□□□□□ -0.91
USF1-202ENST00000368020 C6orf223Q8N319 242 aa9.39□□□□□ -0.91
USF1-202ENST00000368020 LECT2O14960 151 aa9.39□□□□□ -0.91
USF1-202ENST00000368020 MT-ATP8P03928 68 aa9.39□□□□□ -0.91
USF1-202ENST00000368020 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
USF1-202ENST00000368020 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
USF1-202ENST00000368020 ORMDL1Q9P0S3 153 aa9.39□□□□□ -0.91
USF1-202ENST00000368020 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
USF1-202ENST00000368020 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
USF1-202ENST00000368020 Q9HAA7 133 aa9.38□□□□□ -0.91
USF1-202ENST00000368020 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
USF1-202ENST00000368020 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
USF1-202ENST00000368020 Q6Q795 121 aa9.36□□□□□ -0.91
USF1-202ENST00000368020 H3BQ85 93 aa9.35□□□□□ -0.91
USF1-202ENST00000368020 NCR3O14931 201 aa9.35□□□□□ -0.91
USF1-202ENST00000368020 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
USF1-202ENST00000368020 PRKDCP78527 4128 aaKnown RBP9.35□□□□□ -0.91
USF1-202ENST00000368020 Q8N814 137 aa9.34□□□□□ -0.91
USF1-202ENST00000368020 TMEM256-PLSCR3K7ERE1 68 aa9.34□□□□□ -0.92
USF1-202ENST00000368020 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.92
USF1-202ENST00000368020 C15orf56Q8N910 161 aa9.34□□□□□ -0.92
USF1-202ENST00000368020 RMI2Q96E14 147 aa9.34□□□□□ -0.92
USF1-202ENST00000368020 LINC00526Q96FQ7 95 aa9.34□□□□□ -0.92
USF1-202ENST00000368020 OBSCN-AS1Q96MR7 158 aa9.34□□□□□ -0.92
USF1-202ENST00000368020 C22orf24Q9Y442 160 aa9.34□□□□□ -0.92
USF1-202ENST00000368020 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
USF1-202ENST00000368020 GAGE2BQ13066 116 aa9.33□□□□□ -0.92
USF1-202ENST00000368020 GAGE2EQ4V326 116 aa9.33□□□□□ -0.92
USF1-202ENST00000368020 GAGE2DQ9UEU5 116 aa9.33□□□□□ -0.92
USF1-202ENST00000368020 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
USF1-202ENST00000368020 NDUFC2-KCTD14E9PQ53 114 aa9.32□□□□□ -0.92
USF1-202ENST00000368020 JMJD7-PLA2G4BH0Y9G9 81 aa9.32□□□□□ -0.92
USF1-202ENST00000368020 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
USF1-202ENST00000368020 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
USF1-202ENST00000368020 GHRHP01286 108 aa9.31□□□□□ -0.92
USF1-202ENST00000368020 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
USF1-202ENST00000368020 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
USF1-202ENST00000368020 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
USF1-202ENST00000368020 LINC00575Q6W349 94 aa9.3□□□□□ -0.92
USF1-202ENST00000368020 Q8NDZ9 215 aa9.3□□□□□ -0.92
USF1-202ENST00000368020 Q6ZRU5 148 aa9.29□□□□□ -0.92
USF1-202ENST00000368020 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
USF1-202ENST00000368020 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
USF1-202ENST00000368020 TRAV23DV6A0A075B6W5 121 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 LINC00643Q86TS7 51 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 DIRC1Q969H9 104 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 TGP01266 2768 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 hADV29S1A0JD25 119 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 M0R378 163 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 GAGE2AQ6NT46 116 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
USF1-202ENST00000368020 TRBV7-7A0A0K0K1E9 115 aa9.27□□□□□ -0.93
USF1-202ENST00000368020 XAGE1AQ9HD64 81 aa9.27□□□□□ -0.93
USF1-202ENST00000368020 VPREB1P12018 145 aa9.26□□□□□ -0.93
USF1-202ENST00000368020 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
USF1-202ENST00000368020 SLPIP03973 132 aa9.25□□□□□ -0.93
USF1-202ENST00000368020 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
USF1-202ENST00000368020 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
USF1-202ENST00000368020 C14orf132Q9NPU4 83 aa9.25□□□□□ -0.93
USF1-202ENST00000368020 ZNF73O43830 326 aaPredicted RBP9.24□□□□□ -0.93
USF1-202ENST00000368020 COX7BP24311 80 aa9.22□□□□□ -0.93
USF1-202ENST00000368020 ELOF1P60002 83 aaKnown RBP9.22□□□□□ -0.93
USF1-202ENST00000368020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
USF1-202ENST00000368020 CCKP06307 115 aa9.21□□□□□ -0.94
USF1-202ENST00000368020 Q6ZRP5 223 aa9.21□□□□□ -0.94
USF1-202ENST00000368020 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
USF1-202ENST00000368020 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.94
USF1-202ENST00000368020 NUPR2A6NF83 97 aa9.2□□□□□ -0.94
USF1-202ENST00000368020 USP17L23D6RBM5 183 aa9.19□□□□□ -0.94
USF1-202ENST00000368020 PDE6GP18545 87 aa9.19□□□□□ -0.94
USF1-202ENST00000368020 NDUFV3P56181 108 aaKnown RBP9.19□□□□□ -0.94
USF1-202ENST00000368020 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
USF1-202ENST00000368020 C9orf129Q5T035 196 aaKnown RBP9.19□□□□□ -0.94
USF1-202ENST00000368020 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
USF1-202ENST00000368020 WWC2-AS2Q96NR7 200 aa9.19□□□□□ -0.94
USF1-202ENST00000368020 RBM3P98179 157 aaKnown RBP9.17□□□□□ -0.94
USF1-202ENST00000368020 Q6ZQY7 126 aa9.17□□□□□ -0.94
USF1-202ENST00000368020 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
USF1-202ENST00000368020 LAMTOR3Q9UHA4 124 aa9.16□□□□□ -0.94
USF1-202ENST00000368020 IGLV5-37A0A075B6J1 123 aa9.15□□□□□ -0.94
USF1-202ENST00000368020 Q6JHZ5 121 aa9.15□□□□□ -0.94
USF1-202ENST00000368020 KCNQ1DNQ9H478 68 aa9.15□□□□□ -0.94
USF1-202ENST00000368020 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
USF1-202ENST00000368020 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
USF1-202ENST00000368020 DSCR8Q96T75 97 aa9.14□□□□□ -0.95
USF1-202ENST00000368020 APLNQ9ULZ1 77 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms