RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
VCP-201ENST00000358901 LINC00208Q96KT6 92 aa9.56□□□□□ -0.88
VCP-201ENST00000358901 LINC01547P58512 204 aaPredicted RBP9.55□□□□□ -0.88
VCP-201ENST00000358901 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
VCP-201ENST00000358901 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
VCP-201ENST00000358901 AKAP13Q12802 2813 aa9.54□□□□□ -0.88
VCP-201ENST00000358901 V9GYY9 64 aa9.54□□□□□ -0.88
VCP-201ENST00000358901 SEC61GP60059 68 aa9.53□□□□□ -0.88
VCP-201ENST00000358901 Q8N9L7 120 aa9.53□□□□□ -0.88
VCP-201ENST00000358901 C2orf48Q96LS8 159 aa9.53□□□□□ -0.88
VCP-201ENST00000358901 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
VCP-201ENST00000358901 WDFY4Q6ZS81 3184 aa9.52□□□□□ -0.89
VCP-201ENST00000358901 KLK9Q2XQG4 91 aa9.52□□□□□ -0.89
VCP-201ENST00000358901 A0A087WSZ3 146 aa9.52□□□□□ -0.89
VCP-201ENST00000358901 FHL3Q13643 280 aa9.52□□□□□ -0.89
VCP-201ENST00000358901 PRYO14603 147 aa9.51□□□□□ -0.89
VCP-201ENST00000358901 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
VCP-201ENST00000358901 TMEM254Q8TBM7 123 aa9.51□□□□□ -0.89
VCP-201ENST00000358901 A6NED7 52 aa9.51□□□□□ -0.89
VCP-201ENST00000358901 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
VCP-201ENST00000358901 DEFB116Q30KQ4 102 aa9.5□□□□□ -0.89
VCP-201ENST00000358901 MRPL55Q7Z7F7 128 aaKnown RBP9.5□□□□□ -0.89
VCP-201ENST00000358901 ZNF706Q9Y5V0 76 aaPredicted RBP9.5□□□□□ -0.89
VCP-201ENST00000358901 LITAFQ99732 161 aa9.49□□□□□ -0.89
VCP-201ENST00000358901 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
VCP-201ENST00000358901 FLNAP21333 2647 aaKnown RBP9.48□□□□□ -0.89
VCP-201ENST00000358901 MGAQ8IWI9 3026 aa9.48□□□□□ -0.89
VCP-201ENST00000358901 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
VCP-201ENST00000358901 Q9BRP9 147 aa9.46□□□□□ -0.89
VCP-201ENST00000358901 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.89
VCP-201ENST00000358901 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.9
VCP-201ENST00000358901 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.9
VCP-201ENST00000358901 X6R8D5 127 aa9.46□□□□□ -0.9
VCP-201ENST00000358901 PRLHP81277 87 aa9.45□□□□□ -0.9
VCP-201ENST00000358901 EIF4EBP3O60516 100 aaPredicted RBP9.45□□□□□ -0.9
VCP-201ENST00000358901 CXCL6P80162 114 aa9.44□□□□□ -0.9
VCP-201ENST00000358901 F8WDY8 70 aa9.44□□□□□ -0.9
VCP-201ENST00000358901 LY6G6CO95867 125 aa9.44□□□□□ -0.9
VCP-201ENST00000358901 ESRGQ1W209 222 aa9.44□□□□□ -0.9
VCP-201ENST00000358901 KIAA0087Q14695 138 aa9.43□□□□□ -0.9
VCP-201ENST00000358901 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
VCP-201ENST00000358901 CRYGAP11844 174 aa9.43□□□□□ -0.9
VCP-201ENST00000358901 ITPR3Q14573 2671 aa9.43□□□□□ -0.9
VCP-201ENST00000358901 TNRC18O15417 2968 aaPredicted RBP9.42□□□□□ -0.9
VCP-201ENST00000358901 DNAH14Q0VDD8 3507 aa9.41□□□□□ -0.9
VCP-201ENST00000358901 C1orf195Q5TG92 126 aa9.41□□□□□ -0.9
VCP-201ENST00000358901 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
VCP-201ENST00000358901 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
VCP-201ENST00000358901 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.91
VCP-201ENST00000358901 PSPHP1O15172 72 aa9.39□□□□□ -0.91
VCP-201ENST00000358901 FSHBP01225 129 aa9.39□□□□□ -0.91
VCP-201ENST00000358901 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
VCP-201ENST00000358901 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
VCP-201ENST00000358901 TRBV7-6A0A0J9YX20 115 aa9.38□□□□□ -0.91
VCP-201ENST00000358901 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
VCP-201ENST00000358901 HCG22E2RYF7 251 aa9.38□□□□□ -0.91
VCP-201ENST00000358901 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
VCP-201ENST00000358901 LAMA1P25391 3075 aa9.37□□□□□ -0.91
VCP-201ENST00000358901 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
VCP-201ENST00000358901 CHD6Q8TD26 2715 aa9.37□□□□□ -0.91
VCP-201ENST00000358901 H0Y9P7 68 aa9.37□□□□□ -0.91
VCP-201ENST00000358901 Q6ZQT0 140 aa9.36□□□□□ -0.91
VCP-201ENST00000358901 CELSR3Q9NYQ7 3312 aa9.36□□□□□ -0.91
VCP-201ENST00000358901 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
VCP-201ENST00000358901 NUPR2A6NF83 97 aa9.35□□□□□ -0.91
VCP-201ENST00000358901 ELOF1P60002 83 aaKnown RBP9.34□□□□□ -0.91
VCP-201ENST00000358901 PMAIP1Q13794 54 aa9.33□□□□□ -0.92
VCP-201ENST00000358901 HELZ2Q9BYK8 2649 aaKnown RBP9.33□□□□□ -0.92
VCP-201ENST00000358901 Q8NAQ8 132 aa9.32□□□□□ -0.92
VCP-201ENST00000358901 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
VCP-201ENST00000358901 IGLV5-52A0A0A0MRZ9 124 aa9.3□□□□□ -0.92
VCP-201ENST00000358901 BCE1O60756 84 aa9.29□□□□□ -0.92
VCP-201ENST00000358901 K7ERS5 55 aa9.29□□□□□ -0.92
VCP-201ENST00000358901 TM2D3Q9BRN9 247 aa9.29□□□□□ -0.92
VCP-201ENST00000358901 ZNF292O60281 2723 aa9.29□□□□□ -0.92
VCP-201ENST00000358901 H3BNG1 76 aa9.28□□□□□ -0.92
VCP-201ENST00000358901 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
VCP-201ENST00000358901 Q8NBF4 154 aa9.28□□□□□ -0.92
VCP-201ENST00000358901 C1orf64Q8NEQ6 169 aa9.28□□□□□ -0.92
VCP-201ENST00000358901 hDV103S1A0JD37 113 aa9.28□□□□□ -0.92
VCP-201ENST00000358901 USP34Q70CQ2 3546 aa9.28□□□□□ -0.92
VCP-201ENST00000358901 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.92
VCP-201ENST00000358901 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.92
VCP-201ENST00000358901 SPEGQ15772 3267 aa9.27□□□□□ -0.93
VCP-201ENST00000358901 Q6ZRX8 168 aa9.27□□□□□ -0.93
VCP-201ENST00000358901 ST20-AS1Q8NBB2 130 aa9.26□□□□□ -0.93
VCP-201ENST00000358901 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
VCP-201ENST00000358901 REV3LO60673 3130 aa9.26□□□□□ -0.93
VCP-201ENST00000358901 NHLRC4P0CG21 123 aaPredicted RBP9.25□□□□□ -0.93
VCP-201ENST00000358901 IGLV6-57P01721 117 aa9.25□□□□□ -0.93
VCP-201ENST00000358901 VPREB1P12018 145 aa9.25□□□□□ -0.93
VCP-201ENST00000358901 Q6ZRP5 223 aa9.25□□□□□ -0.93
VCP-201ENST00000358901 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
VCP-201ENST00000358901 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
VCP-201ENST00000358901 GIG44P09565 113 aaPredicted RBP9.24□□□□□ -0.93
VCP-201ENST00000358901 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
VCP-201ENST00000358901 ZNF575Q86XF7 245 aa9.23□□□□□ -0.93
VCP-201ENST00000358901 A0A096LNT2 108 aa9.21□□□□□ -0.93
VCP-201ENST00000358901 A0A1B0GW54 56 aa9.21□□□□□ -0.93
VCP-201ENST00000358901 C1orf134Q5TEV5 83 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms