RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 HAMPP81172 84 aa16.06■□□□□ 0.16
NPAS3-203ENST00000357798 H7BZZ5 65 aa16.05■□□□□ 0.16
NPAS3-203ENST00000357798 Q6ZQY7 126 aa16.05■□□□□ 0.16
NPAS3-203ENST00000357798 CENPEQ02224 2701 aa16.05■□□□□ 0.16
NPAS3-203ENST00000357798 EPM2AB3EWF7 344 aa16.04■□□□□ 0.16
NPAS3-203ENST00000357798 KLKP1Q107X0 134 aa16.04■□□□□ 0.16
NPAS3-203ENST00000357798 NIPBLQ6KC79 2804 aaeCLIP16.04■□□□□ 0.16
NPAS3-203ENST00000357798 ZNF843Q8N446 348 aa16.04■□□□□ 0.16
NPAS3-203ENST00000357798 PRB1P04280 392 aa16.03■□□□□ 0.16
NPAS3-203ENST00000357798 SERP1Q9Y6X1 66 aa16.02■□□□□ 0.16
NPAS3-203ENST00000357798 WFDC11Q8NEX6 87 aa16.02■□□□□ 0.15
NPAS3-203ENST00000357798 NF1P21359 2839 aa16.01■□□□□ 0.15
NPAS3-203ENST00000357798 CYSRT1A8MQ03 144 aa16.01■□□□□ 0.15
NPAS3-203ENST00000357798 ABCA12Q86UK0 2595 aa16.01■□□□□ 0.15
NPAS3-203ENST00000357798 TRAV10A0A0B4J240 114 aa16■□□□□ 0.15
NPAS3-203ENST00000357798 HRCT1Q6UXD1 115 aa16■□□□□ 0.15
NPAS3-203ENST00000357798 SONP18583 2426 aaKnown RBP16■□□□□ 0.15
NPAS3-203ENST00000357798 DIRC1Q969H9 104 aa15.99■□□□□ 0.15
NPAS3-203ENST00000357798 GVQW2A0A096LPI5 108 aaPredicted RBP15.98■□□□□ 0.15
NPAS3-203ENST00000357798 SPATA3Q8NHX4 192 aa15.98■□□□□ 0.15
NPAS3-203ENST00000357798 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.98■□□□□ 0.15
NPAS3-203ENST00000357798 TRBV7-4A0A0J9YYF1 115 aa15.97■□□□□ 0.15
NPAS3-203ENST00000357798 ITPR3Q14573 2671 aa15.96■□□□□ 0.15
NPAS3-203ENST00000357798 ZNF469Q96JG9 3925 aaPredicted RBP15.94■□□□□ 0.14
NPAS3-203ENST00000357798 UBR5O95071 2799 aaPredicted RBP15.93■□□□□ 0.14
NPAS3-203ENST00000357798 COX7BP24311 80 aa15.92■□□□□ 0.14
NPAS3-203ENST00000357798 PRR34Q9NV39 138 aa15.92■□□□□ 0.14
NPAS3-203ENST00000357798 LELP1Q5T871 98 aa15.92■□□□□ 0.14
NPAS3-203ENST00000357798 FN1P02751 2386 aaKnown RBP15.92■□□□□ 0.14
NPAS3-203ENST00000357798 DAD1P61803 113 aa15.92■□□□□ 0.14
NPAS3-203ENST00000357798 CUBNO60494 3623 aa15.91■□□□□ 0.14
NPAS3-203ENST00000357798 TRBV7-6A0A0J9YX20 115 aa15.91■□□□□ 0.14
NPAS3-203ENST00000357798 ZNF73O43830 326 aaPredicted RBP15.91■□□□□ 0.14
NPAS3-203ENST00000357798 KRTAP1-1Q07627 177 aa15.91■□□□□ 0.14
NPAS3-203ENST00000357798 RMI2Q96E14 147 aa15.9■□□□□ 0.14
NPAS3-203ENST00000357798 ELOF1P60002 83 aaKnown RBP15.9■□□□□ 0.14
NPAS3-203ENST00000357798 C6orf48Q9UBA6 75 aa15.9■□□□□ 0.14
NPAS3-203ENST00000357798 SNURFQ9Y675 71 aa15.9■□□□□ 0.14
NPAS3-203ENST00000357798 ZNF462Q96JM2 2506 aa15.89■□□□□ 0.14
NPAS3-203ENST00000357798 DEFB4AO15263 64 aa15.88■□□□□ 0.13
NPAS3-203ENST00000357798 NDUFC1O43677 76 aa15.88■□□□□ 0.13
NPAS3-203ENST00000357798 SETD2Q9BYW2 2564 aaPredicted RBP15.87■□□□□ 0.13
NPAS3-203ENST00000357798 F8WEM9 126 aa15.87■□□□□ 0.13
NPAS3-203ENST00000357798 KLK12Q9UKR0 248 aa15.87■□□□□ 0.13
NPAS3-203ENST00000357798 DEFB135Q30KP9 77 aa15.86■□□□□ 0.13
NPAS3-203ENST00000357798 XAGE1AQ9HD64 81 aa15.86■□□□□ 0.13
NPAS3-203ENST00000357798 APCP25054 2843 aa15.86■□□□□ 0.13
NPAS3-203ENST00000357798 SCXQ7RTU7 201 aa15.84■□□□□ 0.13
NPAS3-203ENST00000357798 TM2D3Q9BRN9 247 aa15.84■□□□□ 0.13
NPAS3-203ENST00000357798 ATP5EP56381 51 aaPredicted RBP15.82■□□□□ 0.12
NPAS3-203ENST00000357798 KRTAP10-3P60369 221 aa15.82■□□□□ 0.12
NPAS3-203ENST00000357798 CELA1Q9UNI1 258 aa15.82■□□□□ 0.12
NPAS3-203ENST00000357798 FLNAP21333 2647 aaKnown RBP15.81■□□□□ 0.12
NPAS3-203ENST00000357798 VPREB1P12018 145 aa15.81■□□□□ 0.12
NPAS3-203ENST00000357798 GCN1Q92616 2671 aaKnown RBP15.8■□□□□ 0.12
NPAS3-203ENST00000357798 APOC4P55056 127 aa15.8■□□□□ 0.12
NPAS3-203ENST00000357798 NREPQ16612 68 aa15.8■□□□□ 0.12
NPAS3-203ENST00000357798 SMIM26A0A096LP01 95 aa15.8■□□□□ 0.12
NPAS3-203ENST00000357798 ERC2-IT1O76042 136 aa15.78■□□□□ 0.12
NPAS3-203ENST00000357798 Q8NAQ8 132 aa15.78■□□□□ 0.12
NPAS3-203ENST00000357798 MIFP14174 115 aa15.78■□□□□ 0.12
NPAS3-203ENST00000357798 MRAPQ8TCY5 172 aa15.78■□□□□ 0.12
NPAS3-203ENST00000357798 M0R378 163 aa15.77■□□□□ 0.12
NPAS3-203ENST00000357798 BPY2O14599 106 aa15.76■□□□□ 0.11
NPAS3-203ENST00000357798 LINC00528Q8N1L1 170 aa15.76■□□□□ 0.11
NPAS3-203ENST00000357798 HTN3P15516 51 aa15.75■□□□□ 0.11
NPAS3-203ENST00000357798 CCDC168Q8NDH2 2452 aa15.75■□□□□ 0.11
NPAS3-203ENST00000357798 SPART-AS1P0CW21 52 aa15.75■□□□□ 0.11
NPAS3-203ENST00000357798 FASNP49327 2511 aaKnown RBP15.74■□□□□ 0.11
NPAS3-203ENST00000357798 EGFEM1PQ0D2K5 195 aa15.74■□□□□ 0.11
NPAS3-203ENST00000357798 NBEAL2Q6ZNJ1 2754 aa15.73■□□□□ 0.11
NPAS3-203ENST00000357798 TMEM254Q8TBM7 123 aa15.73■□□□□ 0.11
NPAS3-203ENST00000357798 CAMK2N2Q96S95 79 aa15.73■□□□□ 0.11
NPAS3-203ENST00000357798 FP248Q71RG6 208 aaPredicted RBP15.72■□□□□ 0.11
NPAS3-203ENST00000357798 ANK3Q12955 4377 aaKnown RBP15.72■□□□□ 0.11
NPAS3-203ENST00000357798 KMT2BQ9UMN6 2715 aaPredicted RBP15.71■□□□□ 0.11
NPAS3-203ENST00000357798 IGKV4-1P06312 121 aa15.7■□□□□ 0.1
NPAS3-203ENST00000357798 HIGD2BQ4VC39 106 aa15.69■□□□□ 0.1
NPAS3-203ENST00000357798 PRO0628Q9UI54 55 aa15.67■□□□□ 0.1
NPAS3-203ENST00000357798 LINC00336Q6ZUF6 198 aa15.66■□□□□ 0.1
NPAS3-203ENST00000357798 Q6ZRU5 148 aa15.65■□□□□ 0.1
NPAS3-203ENST00000357798 OCR1Q9BZK8 76 aa15.65■□□□□ 0.1
NPAS3-203ENST00000357798 KRTAP26-1Q6PEX3 210 aa15.64■□□□□ 0.09
NPAS3-203ENST00000357798 Q8N9L7 120 aa15.64■□□□□ 0.09
NPAS3-203ENST00000357798 HELZ2Q9BYK8 2649 aaKnown RBP15.64■□□□□ 0.09
NPAS3-203ENST00000357798 TENM4Q6N022 2769 aa15.64■□□□□ 0.09
NPAS3-203ENST00000357798 A0A0U1RQV1 116 aa15.62■□□□□ 0.09
NPAS3-203ENST00000357798 C15orf56Q8N910 161 aa15.61■□□□□ 0.09
NPAS3-203ENST00000357798 MTORP42345 2549 aa15.61■□□□□ 0.09
NPAS3-203ENST00000357798 PRYO14603 147 aa15.6■□□□□ 0.09
NPAS3-203ENST00000357798 WFDC10BQ8IUB3 73 aa15.58■□□□□ 0.09
NPAS3-203ENST00000357798 LINC00474Q9P2X8 69 aa15.58■□□□□ 0.08
NPAS3-203ENST00000357798 ACANP16112 2415 aa15.57■□□□□ 0.08
NPAS3-203ENST00000357798 F8WDY8 70 aa15.55■□□□□ 0.08
NPAS3-203ENST00000357798 Q6ZRP5 223 aa15.54■□□□□ 0.08
NPAS3-203ENST00000357798 KCNQ1DNQ9H478 68 aa15.54■□□□□ 0.08
NPAS3-203ENST00000357798 IGLV5-48A0A075B6I7 105 aa15.54■□□□□ 0.08
NPAS3-203ENST00000357798 C3orf84H3BNL1 204 aa15.54■□□□□ 0.08
NPAS3-203ENST00000357798 PDZD2O15018 2839 aa15.53■□□□□ 0.08
NPAS3-203ENST00000357798 A0A1B0GW54 56 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms