RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
TRIM4-203ENST00000355947 IGHV4-28A0A0C4DH34 117 aa9.36□□□□□ -0.91
TRIM4-203ENST00000355947 IL17DQ8TAD2 202 aa9.36□□□□□ -0.91
TRIM4-203ENST00000355947 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
TRIM4-203ENST00000355947 FAM19A3Q7Z5A8 133 aa9.36□□□□□ -0.91
TRIM4-203ENST00000355947 DEFB113Q30KQ7 82 aa9.35□□□□□ -0.91
TRIM4-203ENST00000355947 F8WEM9 126 aa9.35□□□□□ -0.91
TRIM4-203ENST00000355947 Q8IZM0 81 aa9.35□□□□□ -0.91
TRIM4-203ENST00000355947 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.34□□□□□ -0.91
TRIM4-203ENST00000355947 C1orf43Q9BWL3 253 aa9.34□□□□□ -0.91
TRIM4-203ENST00000355947 PRO0255Q9UI72 69 aa9.34□□□□□ -0.91
TRIM4-203ENST00000355947 PKIGQ9Y2B9 76 aa9.33□□□□□ -0.92
TRIM4-203ENST00000355947 LINC01547P58512 204 aaPredicted RBP9.33□□□□□ -0.92
TRIM4-203ENST00000355947 Q6ZVQ6 151 aa9.33□□□□□ -0.92
TRIM4-203ENST00000355947 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
TRIM4-203ENST00000355947 BAHCC1Q9P281 2608 aa9.33□□□□□ -0.92
TRIM4-203ENST00000355947 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
TRIM4-203ENST00000355947 TRBV10-3A0A0K0K1G6 114 aa9.32□□□□□ -0.92
TRIM4-203ENST00000355947 C3orf84H3BNL1 204 aa9.31□□□□□ -0.92
TRIM4-203ENST00000355947 OBSCN-AS1Q96MR7 158 aa9.31□□□□□ -0.92
TRIM4-203ENST00000355947 ZNF469Q96JG9 3925 aaPredicted RBP9.31□□□□□ -0.92
TRIM4-203ENST00000355947 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
TRIM4-203ENST00000355947 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
TRIM4-203ENST00000355947 LINC00575Q6W349 94 aa9.31□□□□□ -0.92
TRIM4-203ENST00000355947 NBPF19A0A087WUL8 3843 aa9.31□□□□□ -0.92
TRIM4-203ENST00000355947 HELZ2Q9BYK8 2649 aaKnown RBP9.3□□□□□ -0.92
TRIM4-203ENST00000355947 TM2D3Q9BRN9 247 aa9.3□□□□□ -0.92
TRIM4-203ENST00000355947 PDZD2O15018 2839 aa9.29□□□□□ -0.92
TRIM4-203ENST00000355947 RPS28P62857 69 aaKnown RBP9.29□□□□□ -0.92
TRIM4-203ENST00000355947 NDUFC2O95298 119 aa9.29□□□□□ -0.92
TRIM4-203ENST00000355947 FSHBP01225 129 aa9.29□□□□□ -0.92
TRIM4-203ENST00000355947 ZNF561-AS1K7EIQ3 104 aa9.28□□□□□ -0.92
TRIM4-203ENST00000355947 LY6G6DO95868 133 aa9.28□□□□□ -0.92
TRIM4-203ENST00000355947 Q6ZQT0 140 aa9.28□□□□□ -0.92
TRIM4-203ENST00000355947 LRCOL1A6NCL2 159 aa9.28□□□□□ -0.92
TRIM4-203ENST00000355947 IGLV1-51P01701 117 aa9.28□□□□□ -0.92
TRIM4-203ENST00000355947 CSNK1G2-AS1Q8NCQ2 148 aa9.28□□□□□ -0.92
TRIM4-203ENST00000355947 MRAPQ8TCY5 172 aa9.28□□□□□ -0.92
TRIM4-203ENST00000355947 LINC00474Q9P2X8 69 aa9.27□□□□□ -0.92
TRIM4-203ENST00000355947 KIAA0087Q14695 138 aa9.27□□□□□ -0.93
TRIM4-203ENST00000355947 ATP5EP2Q5VTU8 51 aa9.27□□□□□ -0.93
TRIM4-203ENST00000355947 DIRC1Q969H9 104 aa9.27□□□□□ -0.93
TRIM4-203ENST00000355947 BRK1Q8WUW1 75 aa9.26□□□□□ -0.93
TRIM4-203ENST00000355947 SMR3AQ99954 134 aa9.26□□□□□ -0.93
TRIM4-203ENST00000355947 Q5XG85 94 aa9.26□□□□□ -0.93
TRIM4-203ENST00000355947 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
TRIM4-203ENST00000355947 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
TRIM4-203ENST00000355947 CMC4P56277 68 aaPredicted RBP9.25□□□□□ -0.93
TRIM4-203ENST00000355947 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
TRIM4-203ENST00000355947 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
TRIM4-203ENST00000355947 MUC7Q8TAX7 377 aa9.24□□□□□ -0.93
TRIM4-203ENST00000355947 BPY2O14599 106 aa9.24□□□□□ -0.93
TRIM4-203ENST00000355947 H7BZZ5 65 aa9.23□□□□□ -0.93
TRIM4-203ENST00000355947 COX7BP24311 80 aa9.23□□□□□ -0.93
TRIM4-203ENST00000355947 LINC00336Q6ZUF6 198 aa9.23□□□□□ -0.93
TRIM4-203ENST00000355947 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
TRIM4-203ENST00000355947 PRR4Q16378 134 aa9.22□□□□□ -0.93
TRIM4-203ENST00000355947 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
TRIM4-203ENST00000355947 ZNF73O43830 326 aaPredicted RBP9.22□□□□□ -0.93
TRIM4-203ENST00000355947 NOTCH1P46531 2555 aa9.21□□□□□ -0.93
TRIM4-203ENST00000355947 NREPQ16612 68 aa9.2□□□□□ -0.94
TRIM4-203ENST00000355947 X6R8D5 127 aa9.2□□□□□ -0.94
TRIM4-203ENST00000355947 TENM4Q6N022 2769 aa9.2□□□□□ -0.94
TRIM4-203ENST00000355947 TENM1Q9UKZ4 2725 aa9.19□□□□□ -0.94
TRIM4-203ENST00000355947 MIFP14174 115 aa9.18□□□□□ -0.94
TRIM4-203ENST00000355947 COX17Q14061 63 aa9.18□□□□□ -0.94
TRIM4-203ENST00000355947 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
TRIM4-203ENST00000355947 C6orf48Q9UBA6 75 aa9.18□□□□□ -0.94
TRIM4-203ENST00000355947 TRBV7-6A0A0J9YX20 115 aa9.16□□□□□ -0.94
TRIM4-203ENST00000355947 LYPD5Q6UWN5 251 aa9.16□□□□□ -0.94
TRIM4-203ENST00000355947 FAM30AQ9NZY2 134 aa9.16□□□□□ -0.94
TRIM4-203ENST00000355947 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
TRIM4-203ENST00000355947 IGKV2D-24A0A075B6R9 120 aa9.16□□□□□ -0.94
TRIM4-203ENST00000355947 NBEAL1Q6ZS30 2694 aa9.15□□□□□ -0.94
TRIM4-203ENST00000355947 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
TRIM4-203ENST00000355947 TMEM254Q8TBM7 123 aa9.15□□□□□ -0.94
TRIM4-203ENST00000355947 MAST4O15021 2626 aa9.14□□□□□ -0.95
TRIM4-203ENST00000355947 HIGD2AQ9BW72 106 aa9.14□□□□□ -0.95
TRIM4-203ENST00000355947 WFDC10BQ8IUB3 73 aa9.13□□□□□ -0.95
TRIM4-203ENST00000355947 FLNBO75369 2602 aaKnown RBP9.13□□□□□ -0.95
TRIM4-203ENST00000355947 NDUFC2-KCTD14E9PQ53 114 aa9.12□□□□□ -0.95
TRIM4-203ENST00000355947 Q6ZRU5 148 aa9.12□□□□□ -0.95
TRIM4-203ENST00000355947 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
TRIM4-203ENST00000355947 RETNQ9HD89 108 aa9.12□□□□□ -0.95
TRIM4-203ENST00000355947 COL6A5A8TX70 2615 aa9.12□□□□□ -0.95
TRIM4-203ENST00000355947 IGLV6-57P01721 117 aa9.11□□□□□ -0.95
TRIM4-203ENST00000355947 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
TRIM4-203ENST00000355947 SMIM26A0A096LP01 95 aa9.11□□□□□ -0.95
TRIM4-203ENST00000355947 SPART-AS1P0CW21 52 aa9.11□□□□□ -0.95
TRIM4-203ENST00000355947 DEFB116Q30KQ4 102 aa9.1□□□□□ -0.95
TRIM4-203ENST00000355947 FP248Q71RG6 208 aaPredicted RBP9.1□□□□□ -0.95
TRIM4-203ENST00000355947 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
TRIM4-203ENST00000355947 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRIM4-203ENST00000355947 PDE6GP18545 87 aa9.09□□□□□ -0.95
TRIM4-203ENST00000355947 A0A0G2JQZ4 141 aa9.09□□□□□ -0.95
TRIM4-203ENST00000355947 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
TRIM4-203ENST00000355947 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
TRIM4-203ENST00000355947 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
TRIM4-203ENST00000355947 KRTAP10-3P60369 221 aa9.08□□□□□ -0.96
TRIM4-203ENST00000355947 KLKP1Q107X0 134 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms