RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
SAMM50-201ENST00000350028 SCGB1A1P11684 91 aa11.13□□□□□ -0.63
SAMM50-201ENST00000350028 CAMK2N2Q96S95 79 aa11.13□□□□□ -0.63
SAMM50-201ENST00000350028 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 Q9HAA7 133 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 MEGF8Q7Z7M0 2845 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 A0A1B0GX51 115 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 NCR3O14931 201 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 Q8NDZ9 215 aa11.12□□□□□ -0.63
SAMM50-201ENST00000350028 S100A7L2Q5SY68 101 aa11.11□□□□□ -0.63
SAMM50-201ENST00000350028 LECT2O14960 151 aa11.1□□□□□ -0.63
SAMM50-201ENST00000350028 LINC00588Q9Y4M8 146 aa11.1□□□□□ -0.63
SAMM50-201ENST00000350028 C21orf62-AS1Q17RA5 79 aa11.09□□□□□ -0.63
SAMM50-201ENST00000350028 C22orf24Q9Y442 160 aa11.09□□□□□ -0.63
SAMM50-201ENST00000350028 FAM240AA0A1B0GVK7 77 aa11.09□□□□□ -0.63
SAMM50-201ENST00000350028 XGP55808 180 aa11.08□□□□□ -0.64
SAMM50-201ENST00000350028 Q6ZRU5 148 aa11.08□□□□□ -0.64
SAMM50-201ENST00000350028 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
SAMM50-201ENST00000350028 LINC00167Q96N53 147 aa11.06□□□□□ -0.64
SAMM50-201ENST00000350028 IGLV6-57P01721 117 aa11.06□□□□□ -0.64
SAMM50-201ENST00000350028 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
SAMM50-201ENST00000350028 INAFM2P0DMQ5 153 aa11.06□□□□□ -0.64
SAMM50-201ENST00000350028 PRKDCP78527 4128 aaKnown RBP11.05□□□□□ -0.64
SAMM50-201ENST00000350028 SNCGO76070 127 aa11.05□□□□□ -0.64
SAMM50-201ENST00000350028 ACYP1P07311 99 aa11.05□□□□□ -0.64
SAMM50-201ENST00000350028 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
SAMM50-201ENST00000350028 COL7A1Q02388 2944 aa11.05□□□□□ -0.64
SAMM50-201ENST00000350028 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
SAMM50-201ENST00000350028 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
SAMM50-201ENST00000350028 C6orf99Q4VX62 202 aa11.04□□□□□ -0.64
SAMM50-201ENST00000350028 UPK3BQ9BT76 320 aa11.04□□□□□ -0.64
SAMM50-201ENST00000350028 XAGE1AQ9HD64 81 aa11.04□□□□□ -0.64
SAMM50-201ENST00000350028 ORMDL1Q9P0S3 153 aa11.04□□□□□ -0.64
SAMM50-201ENST00000350028 HUWE1Q7Z6Z7 4374 aaKnown RBP11.04□□□□□ -0.64
SAMM50-201ENST00000350028 Q8N814 137 aa11.04□□□□□ -0.64
SAMM50-201ENST00000350028 RMI2Q96E14 147 aa11.04□□□□□ -0.64
SAMM50-201ENST00000350028 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
SAMM50-201ENST00000350028 SLPIP03973 132 aa11.01□□□□□ -0.65
SAMM50-201ENST00000350028 VPREB1P12018 145 aa11□□□□□ -0.65
SAMM50-201ENST00000350028 LINC00575Q6W349 94 aa11□□□□□ -0.65
SAMM50-201ENST00000350028 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
SAMM50-201ENST00000350028 TRBV10-3A0A0K0K1G6 114 aa10.99□□□□□ -0.65
SAMM50-201ENST00000350028 M0R378 163 aa10.98□□□□□ -0.65
SAMM50-201ENST00000350028 TRAV23DV6A0A075B6W5 121 aa10.98□□□□□ -0.65
SAMM50-201ENST00000350028 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
SAMM50-201ENST00000350028 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
SAMM50-201ENST00000350028 B9D2Q9BPU9 175 aa10.97□□□□□ -0.65
SAMM50-201ENST00000350028 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
SAMM50-201ENST00000350028 Q6ZRP5 223 aa10.96□□□□□ -0.65
SAMM50-201ENST00000350028 DIRC1Q969H9 104 aa10.96□□□□□ -0.65
SAMM50-201ENST00000350028 hADV29S1A0JD25 119 aa10.95□□□□□ -0.66
SAMM50-201ENST00000350028 USP17L23D6RBM5 183 aa10.95□□□□□ -0.66
SAMM50-201ENST00000350028 TLX1NBP0CAT3 122 aa10.95□□□□□ -0.66
SAMM50-201ENST00000350028 TRBV7-6A0A0J9YX20 115 aa10.94□□□□□ -0.66
SAMM50-201ENST00000350028 C9orf129Q5T035 196 aaKnown RBP10.94□□□□□ -0.66
SAMM50-201ENST00000350028 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
SAMM50-201ENST00000350028 FBN3Q75N90 2809 aa10.93□□□□□ -0.66
SAMM50-201ENST00000350028 ZNF73O43830 326 aaPredicted RBP10.92□□□□□ -0.66
SAMM50-201ENST00000350028 GAGE2AQ6NT46 116 aa10.92□□□□□ -0.66
SAMM50-201ENST00000350028 Q6Q795 121 aa10.92□□□□□ -0.66
SAMM50-201ENST00000350028 C14orf132Q9NPU4 83 aa10.92□□□□□ -0.66
SAMM50-201ENST00000350028 H3BQ85 93 aa10.92□□□□□ -0.66
SAMM50-201ENST00000350028 GAGE2BQ13066 116 aa10.92□□□□□ -0.66
SAMM50-201ENST00000350028 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
SAMM50-201ENST00000350028 COX7BP24311 80 aa10.91□□□□□ -0.66
SAMM50-201ENST00000350028 TTC32Q5I0X7 151 aa10.91□□□□□ -0.66
SAMM50-201ENST00000350028 SDIM1Q6ZPB5 146 aa10.9□□□□□ -0.66
SAMM50-201ENST00000350028 APLNQ9ULZ1 77 aa10.9□□□□□ -0.66
SAMM50-201ENST00000350028 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
SAMM50-201ENST00000350028 ELOF1P60002 83 aaKnown RBP10.89□□□□□ -0.67
SAMM50-201ENST00000350028 LINC00643Q86TS7 51 aa10.89□□□□□ -0.67
SAMM50-201ENST00000350028 STAB2Q8WWQ8 2551 aa10.88□□□□□ -0.67
SAMM50-201ENST00000350028 NHLRC4P0CG21 123 aaPredicted RBP10.87□□□□□ -0.67
SAMM50-201ENST00000350028 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
SAMM50-201ENST00000350028 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
SAMM50-201ENST00000350028 GHRHP01286 108 aa10.86□□□□□ -0.67
SAMM50-201ENST00000350028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
SAMM50-201ENST00000350028 CCKP06307 115 aa10.85□□□□□ -0.67
SAMM50-201ENST00000350028 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
SAMM50-201ENST00000350028 IGLV5-37A0A075B6J1 123 aa10.84□□□□□ -0.67
SAMM50-201ENST00000350028 TRBV7-7A0A0K0K1E9 115 aa10.84□□□□□ -0.67
SAMM50-201ENST00000350028 Q6ZQY7 126 aa10.84□□□□□ -0.67
SAMM50-201ENST00000350028 SERTAD4-AS1Q5TG53 156 aa10.84□□□□□ -0.67
SAMM50-201ENST00000350028 KCNQ1DNQ9H478 68 aa10.84□□□□□ -0.67
SAMM50-201ENST00000350028 LOC107984640A0A0U1RRK4 108 aa10.83□□□□□ -0.68
SAMM50-201ENST00000350028 C7orf33Q8WU49 177 aa10.83□□□□□ -0.68
SAMM50-201ENST00000350028 IMUPQ9GZP8 106 aa10.83□□□□□ -0.68
SAMM50-201ENST00000350028 LINC00528Q8N1L1 170 aa10.82□□□□□ -0.68
SAMM50-201ENST00000350028 A0A1B0GV72 72 aa10.81□□□□□ -0.68
SAMM50-201ENST00000350028 KRTAP1-5Q9BYS1 174 aa10.81□□□□□ -0.68
SAMM50-201ENST00000350028 NUPR2A6NF83 97 aa10.81□□□□□ -0.68
SAMM50-201ENST00000350028 LAMTOR3Q9UHA4 124 aa10.81□□□□□ -0.68
SAMM50-201ENST00000350028 RBM3P98179 157 aaKnown RBP10.8□□□□□ -0.68
SAMM50-201ENST00000350028 TGP01266 2768 aa10.8□□□□□ -0.68
SAMM50-201ENST00000350028 PSCAO43653 123 aa10.78□□□□□ -0.68
SAMM50-201ENST00000350028 LINC00846Q9NV44 126 aa10.78□□□□□ -0.68
SAMM50-201ENST00000350028 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
SAMM50-201ENST00000350028 PRYO14603 147 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms