RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 Q9BRP9 147 aa12.96□□□□□ -0.33
UBE3C-201ENST00000348165 LINC00208Q96KT6 92 aa12.96□□□□□ -0.34
UBE3C-201ENST00000348165 MAST4O15021 2626 aa12.95□□□□□ -0.34
UBE3C-201ENST00000348165 PRLHP81277 87 aa12.95□□□□□ -0.34
UBE3C-201ENST00000348165 COL4A2P08572 1712 aa12.94□□□□□ -0.34
UBE3C-201ENST00000348165 A0A087WSZ3 146 aa12.93□□□□□ -0.34
UBE3C-201ENST00000348165 F8WDY8 70 aa12.93□□□□□ -0.34
UBE3C-201ENST00000348165 LINC01561Q8N1V8 128 aa12.93□□□□□ -0.34
UBE3C-201ENST00000348165 X6R8D5 127 aa12.92□□□□□ -0.34
UBE3C-201ENST00000348165 LINC00575Q6W349 94 aa12.92□□□□□ -0.34
UBE3C-201ENST00000348165 IGLV5-39A0A0G2JS06 123 aa12.91□□□□□ -0.34
UBE3C-201ENST00000348165 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
UBE3C-201ENST00000348165 MDFIQ99750 246 aa12.91□□□□□ -0.34
UBE3C-201ENST00000348165 IGHV6-1A0A0B4J1U7 121 aa12.9□□□□□ -0.34
UBE3C-201ENST00000348165 C22orf24Q9Y442 160 aa12.9□□□□□ -0.34
UBE3C-201ENST00000348165 DEFB116Q30KQ4 102 aa12.9□□□□□ -0.34
UBE3C-201ENST00000348165 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
UBE3C-201ENST00000348165 Q6ZVQ6 151 aa12.88□□□□□ -0.35
UBE3C-201ENST00000348165 BPTFQ12830 3046 aa12.86□□□□□ -0.35
UBE3C-201ENST00000348165 FSHBP01225 129 aa12.84□□□□□ -0.35
UBE3C-201ENST00000348165 COL27A1Q8IZC6 1860 aaPredicted RBP12.84□□□□□ -0.35
UBE3C-201ENST00000348165 SMCR5Q8TEV8 140 aa12.84□□□□□ -0.35
UBE3C-201ENST00000348165 LINC01546A6NGU7 62 aa12.83□□□□□ -0.36
UBE3C-201ENST00000348165 RETNLBQ9BQ08 111 aa12.82□□□□□ -0.36
UBE3C-201ENST00000348165 PCSK5Q92824 1860 aa12.82□□□□□ -0.36
UBE3C-201ENST00000348165 C6orf48Q9UBA6 75 aa12.81□□□□□ -0.36
UBE3C-201ENST00000348165 PCNTO95613 3336 aa12.79□□□□□ -0.36
UBE3C-201ENST00000348165 CXCL6P80162 114 aa12.79□□□□□ -0.36
UBE3C-201ENST00000348165 LINC00167Q96N53 147 aa12.79□□□□□ -0.36
UBE3C-201ENST00000348165 BCE1O60756 84 aa12.78□□□□□ -0.36
UBE3C-201ENST00000348165 LIMD2Q9BT23 127 aa12.78□□□□□ -0.36
UBE3C-201ENST00000348165 Q8NAQ8 132 aa12.77□□□□□ -0.36
UBE3C-201ENST00000348165 CENPEQ02224 2701 aa12.77□□□□□ -0.36
UBE3C-201ENST00000348165 IGLV5-45A0A087WSX0 123 aa12.75□□□□□ -0.37
UBE3C-201ENST00000348165 H3BNG1 76 aa12.75□□□□□ -0.37
UBE3C-201ENST00000348165 KIAA0087Q14695 138 aa12.75□□□□□ -0.37
UBE3C-201ENST00000348165 PCOTHQ58A44 107 aa12.74□□□□□ -0.37
UBE3C-201ENST00000348165 hDV103S1A0JD37 113 aa12.73□□□□□ -0.37
UBE3C-201ENST00000348165 SERTAD4-AS1Q5TG53 156 aa12.72□□□□□ -0.37
UBE3C-201ENST00000348165 H0Y9P7 68 aa12.72□□□□□ -0.37
UBE3C-201ENST00000348165 KLK9Q2XQG4 91 aa12.71□□□□□ -0.38
UBE3C-201ENST00000348165 CHD7Q9P2D1 2997 aa12.71□□□□□ -0.38
UBE3C-201ENST00000348165 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
UBE3C-201ENST00000348165 HELZ2Q9BYK8 2649 aaKnown RBP12.69□□□□□ -0.38
UBE3C-201ENST00000348165 FLNAP21333 2647 aaKnown RBP12.67□□□□□ -0.38
UBE3C-201ENST00000348165 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
UBE3C-201ENST00000348165 FAM218AQ96MZ4 157 aa12.66□□□□□ -0.38
UBE3C-201ENST00000348165 HCG22E2RYF7 251 aa12.66□□□□□ -0.38
UBE3C-201ENST00000348165 NBDYA0A0U1RRE5 68 aa12.65□□□□□ -0.38
UBE3C-201ENST00000348165 C5orf42Q9H799 3197 aa12.65□□□□□ -0.38
UBE3C-201ENST00000348165 PHF5AQ7RTV0 110 aaKnown RBP12.65□□□□□ -0.38
UBE3C-201ENST00000348165 RANBP2P49792 3224 aaKnown RBP12.64□□□□□ -0.39
UBE3C-201ENST00000348165 MOBPQ13875 183 aa12.64□□□□□ -0.39
UBE3C-201ENST00000348165 SPINK1P00995 79 aa12.64□□□□□ -0.39
UBE3C-201ENST00000348165 ITPR3Q14573 2671 aa12.63□□□□□ -0.39
UBE3C-201ENST00000348165 SMIM29Q86T20 159 aa12.62□□□□□ -0.39
UBE3C-201ENST00000348165 VPREB1P12018 145 aa12.62□□□□□ -0.39
UBE3C-201ENST00000348165 SPACA4Q8TDM5 124 aa12.61□□□□□ -0.39
UBE3C-201ENST00000348165 A0A096LNT2 108 aa12.61□□□□□ -0.39
UBE3C-201ENST00000348165 CFAP46Q8IYW2 2715 aa12.6□□□□□ -0.39
UBE3C-201ENST00000348165 RTL8CO15255 209 aa12.59□□□□□ -0.39
UBE3C-201ENST00000348165 CHTF8P0CG12 524 aa12.59□□□□□ -0.39
UBE3C-201ENST00000348165 ELOF1P60002 83 aaKnown RBP12.58□□□□□ -0.4
UBE3C-201ENST00000348165 C1orf64Q8NEQ6 169 aa12.58□□□□□ -0.4
UBE3C-201ENST00000348165 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
UBE3C-201ENST00000348165 Q6ZRX8 168 aa12.55□□□□□ -0.4
UBE3C-201ENST00000348165 IGKV2D-30A0A075B6S6 120 aa12.55□□□□□ -0.4
UBE3C-201ENST00000348165 IGKV2-30P06310 120 aa12.55□□□□□ -0.4
UBE3C-201ENST00000348165 ST20-AS1Q8NBB2 130 aa12.54□□□□□ -0.4
UBE3C-201ENST00000348165 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
UBE3C-201ENST00000348165 Q6ZRP5 223 aa12.54□□□□□ -0.4
UBE3C-201ENST00000348165 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
UBE3C-201ENST00000348165 GVQW2A0A096LPI5 108 aaPredicted RBP12.54□□□□□ -0.4
UBE3C-201ENST00000348165 TM2D3Q9BRN9 247 aa12.53□□□□□ -0.4
UBE3C-201ENST00000348165 KRTAP10-11P60412 298 aa12.52□□□□□ -0.4
UBE3C-201ENST00000348165 LINC00336Q6ZUF6 198 aa12.52□□□□□ -0.4
UBE3C-201ENST00000348165 DNAH10OSP0CZ25 163 aa12.52□□□□□ -0.41
UBE3C-201ENST00000348165 SPAG11AQ6PDA7 123 aa12.52□□□□□ -0.41
UBE3C-201ENST00000348165 K7EIL1 84 aa12.51□□□□□ -0.41
UBE3C-201ENST00000348165 LINC00476Q8WZB0 136 aa12.51□□□□□ -0.41
UBE3C-201ENST00000348165 WWC2-AS2Q96NR7 200 aa12.5□□□□□ -0.41
UBE3C-201ENST00000348165 KRTAP10-3P60369 221 aa12.49□□□□□ -0.41
UBE3C-201ENST00000348165 Q6ZQT0 140 aa12.48□□□□□ -0.41
UBE3C-201ENST00000348165 LITAFQ99732 161 aa12.48□□□□□ -0.41
UBE3C-201ENST00000348165 FAM168BA1KXE4 195 aa12.48□□□□□ -0.41
UBE3C-201ENST00000348165 Q8NBF4 154 aa12.47□□□□□ -0.41
UBE3C-201ENST00000348165 GIG44P09565 113 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-201ENST00000348165 C19orf73Q9NVV2 129 aa12.46□□□□□ -0.41
UBE3C-201ENST00000348165 CD164Q04900 197 aa12.46□□□□□ -0.42
UBE3C-201ENST00000348165 LOC110117498A0A087WWA1 95 aa12.45□□□□□ -0.42
UBE3C-201ENST00000348165 A0A1B0GU69 56 aa12.44□□□□□ -0.42
UBE3C-201ENST00000348165 C8orf87E5RJ46 101 aa12.43□□□□□ -0.42
UBE3C-201ENST00000348165 FAM229AH3BQW9 127 aa12.43□□□□□ -0.42
UBE3C-201ENST00000348165 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
UBE3C-201ENST00000348165 AKAP13Q12802 2813 aa12.42□□□□□ -0.42
UBE3C-201ENST00000348165 TYMSOSQ8TAI1 123 aa12.41□□□□□ -0.42
UBE3C-201ENST00000348165 A8MUN3 132 aa12.41□□□□□ -0.42
UBE3C-201ENST00000348165 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.43
UBE3C-201ENST00000348165 TEP1Q99973 2627 aaKnown RBP12.39□□□□□ -0.43
UBE3C-201ENST00000348165 IGLV6-57P01721 117 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms