RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TRBV20-1A0A075B6N2 111 aa14.01□□□□□ -0.17
TSPAN3-202ENST00000346495 TLX1NBP0CAT3 122 aa14.01□□□□□ -0.17
TSPAN3-202ENST00000346495 WFDC2Q14508 124 aa14.01□□□□□ -0.17
TSPAN3-202ENST00000346495 XAGE1AQ9HD64 81 aa14.01□□□□□ -0.17
TSPAN3-202ENST00000346495 M0R2N4 97 aa14□□□□□ -0.17
TSPAN3-202ENST00000346495 OR13C6PQ8NH95 151 aa14□□□□□ -0.17
TSPAN3-202ENST00000346495 VPS13DQ5THJ4 4388 aa13.99□□□□□ -0.17
TSPAN3-202ENST00000346495 Q6ZRN7 208 aaPredicted RBP13.99□□□□□ -0.17
TSPAN3-202ENST00000346495 Q6ZRP5 223 aa13.99□□□□□ -0.17
TSPAN3-202ENST00000346495 C3orf84H3BNL1 204 aa13.98□□□□□ -0.17
TSPAN3-202ENST00000346495 PRR3P79522 188 aaKnown RBP13.98□□□□□ -0.17
TSPAN3-202ENST00000346495 Q8NDZ9 215 aa13.98□□□□□ -0.17
TSPAN3-202ENST00000346495 TCL1BO95988 128 aa13.97□□□□□ -0.17
TSPAN3-202ENST00000346495 GAGE2EQ4V326 116 aa13.97□□□□□ -0.17
TSPAN3-202ENST00000346495 GAGE2DQ9UEU5 116 aa13.97□□□□□ -0.17
TSPAN3-202ENST00000346495 TENM2Q9NT68 2774 aa13.97□□□□□ -0.17
TSPAN3-202ENST00000346495 H3BMG7 143 aa13.97□□□□□ -0.17
TSPAN3-202ENST00000346495 RPL28P46779 137 aaKnown RBP13.97□□□□□ -0.17
TSPAN3-202ENST00000346495 NCR3O14931 201 aa13.96□□□□□ -0.17
TSPAN3-202ENST00000346495 Q6ZR54 194 aa13.96□□□□□ -0.17
TSPAN3-202ENST00000346495 TRBV10-2A0A0K0K1G8 114 aa13.95□□□□□ -0.18
TSPAN3-202ENST00000346495 LY6G6CO95867 125 aa13.95□□□□□ -0.18
TSPAN3-202ENST00000346495 CNBPP62633 177 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-202ENST00000346495 RPL18AQ02543 176 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-202ENST00000346495 TMEM126AQ9H061 195 aa13.95□□□□□ -0.18
TSPAN3-202ENST00000346495 LRCOL1A6NCL2 159 aa13.94□□□□□ -0.18
TSPAN3-202ENST00000346495 SMIM11BQ8TCY0 68 aa13.94□□□□□ -0.18
TSPAN3-202ENST00000346495 ATXN8Q156A1 80 aa13.93□□□□□ -0.18
TSPAN3-202ENST00000346495 LINC00476Q8WZB0 136 aa13.93□□□□□ -0.18
TSPAN3-202ENST00000346495 LOC107984640A0A0U1RRK4 108 aa13.92□□□□□ -0.18
TSPAN3-202ENST00000346495 S100A7L2Q5SY68 101 aa13.92□□□□□ -0.18
TSPAN3-202ENST00000346495 VPREB1P12018 145 aa13.91□□□□□ -0.18
TSPAN3-202ENST00000346495 C9orf129Q5T035 196 aaKnown RBP13.91□□□□□ -0.18
TSPAN3-202ENST00000346495 CLEC2BQ92478 149 aa13.89□□□□□ -0.19
TSPAN3-202ENST00000346495 F8W1H4 67 aa13.88□□□□□ -0.19
TSPAN3-202ENST00000346495 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.87□□□□□ -0.19
TSPAN3-202ENST00000346495 IGLV6-57P01721 117 aa13.87□□□□□ -0.19
TSPAN3-202ENST00000346495 PLA2G2DQ9UNK4 145 aa13.87□□□□□ -0.19
TSPAN3-202ENST00000346495 M0R378 163 aa13.86□□□□□ -0.19
TSPAN3-202ENST00000346495 LST1O00453 97 aa13.86□□□□□ -0.19
TSPAN3-202ENST00000346495 GAGE2BQ13066 116 aa13.86□□□□□ -0.19
TSPAN3-202ENST00000346495 TGP01266 2768 aa13.85□□□□□ -0.19
TSPAN3-202ENST00000346495 H0YGX0 51 aa13.85□□□□□ -0.19
TSPAN3-202ENST00000346495 C1orf134Q5TEV5 83 aa13.85□□□□□ -0.19
TSPAN3-202ENST00000346495 PRO0461Q9UI25 63 aa13.85□□□□□ -0.19
TSPAN3-202ENST00000346495 DNAH10Q8IVF4 4471 aa13.84□□□□□ -0.19
TSPAN3-202ENST00000346495 LINC01620Q4KN68 170 aa13.84□□□□□ -0.19
TSPAN3-202ENST00000346495 Q8N814 137 aa13.83□□□□□ -0.2
TSPAN3-202ENST00000346495 MTURNQ8N3F0 131 aa13.82□□□□□ -0.2
TSPAN3-202ENST00000346495 PKIGQ9Y2B9 76 aa13.82□□□□□ -0.2
TSPAN3-202ENST00000346495 A0A087WTM6 91 aa13.82□□□□□ -0.2
TSPAN3-202ENST00000346495 TRBV10-3A0A0K0K1G6 114 aa13.82□□□□□ -0.2
TSPAN3-202ENST00000346495 NKAPP1Q8N9T2 125 aa13.82□□□□□ -0.2
TSPAN3-202ENST00000346495 C9JAW5 83 aa13.81□□□□□ -0.2
TSPAN3-202ENST00000346495 SERTAD4-AS1Q5TG53 156 aa13.81□□□□□ -0.2
TSPAN3-202ENST00000346495 C16orf90A8MZG2 172 aa13.8□□□□□ -0.2
TSPAN3-202ENST00000346495 C9orf163Q8N9P6 203 aa13.8□□□□□ -0.2
TSPAN3-202ENST00000346495 CBY1Q9Y3M2 126 aa13.8□□□□□ -0.2
TSPAN3-202ENST00000346495 IGLV5-37A0A075B6J1 123 aa13.79□□□□□ -0.2
TSPAN3-202ENST00000346495 TRACP01848 142 aa13.79□□□□□ -0.2
TSPAN3-202ENST00000346495 FAM218AQ96MZ4 157 aa13.79□□□□□ -0.2
TSPAN3-202ENST00000346495 TRAV23DV6A0A075B6W5 121 aa13.78□□□□□ -0.2
TSPAN3-202ENST00000346495 C6orf99Q4VX62 202 aa13.78□□□□□ -0.2
TSPAN3-202ENST00000346495 A0A096LNI7 61 aa13.77□□□□□ -0.21
TSPAN3-202ENST00000346495 SLC25A20O43772 301 aa13.77□□□□□ -0.21
TSPAN3-202ENST00000346495 ALMS1Q8TCU4 4167 aa13.76□□□□□ -0.21
TSPAN3-202ENST00000346495 SMCPP49901 116 aaPredicted RBP13.76□□□□□ -0.21
TSPAN3-202ENST00000346495 DNAH6Q9C0G6 4158 aa13.76□□□□□ -0.21
TSPAN3-202ENST00000346495 FAM168BA1KXE4 195 aa13.75□□□□□ -0.21
TSPAN3-202ENST00000346495 M0QXV9 152 aa13.74□□□□□ -0.21
TSPAN3-202ENST00000346495 C7orf33Q8WU49 177 aa13.74□□□□□ -0.21
TSPAN3-202ENST00000346495 DIRC1Q969H9 104 aa13.74□□□□□ -0.21
TSPAN3-202ENST00000346495 IGKV2-24A0A0C4DH68 120 aa13.73□□□□□ -0.21
TSPAN3-202ENST00000346495 A0A087WYN8 130 aa13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 FAM19A5Q7Z5A7 132 aaPredicted RBP13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 LINC01600Q96MT4 127 aa13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 A0A1B0GX51 115 aa13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 ZNF73O43830 326 aaPredicted RBP13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 KRTAP7-1Q8IUC3 87 aa13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 ANKRD29Q8N6D5 301 aa13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 C22orf24Q9Y442 160 aa13.72□□□□□ -0.21
TSPAN3-202ENST00000346495 H3BT86 120 aa13.71□□□□□ -0.22
TSPAN3-202ENST00000346495 SDIM1Q6ZPB5 146 aa13.71□□□□□ -0.22
TSPAN3-202ENST00000346495 DNAL4O96015 105 aa13.7□□□□□ -0.22
TSPAN3-202ENST00000346495 TRBV7-6A0A0J9YX20 115 aa13.69□□□□□ -0.22
TSPAN3-202ENST00000346495 ETDBQ3ZM63 59 aa13.69□□□□□ -0.22
TSPAN3-202ENST00000346495 MRPL55Q7Z7F7 128 aaKnown RBP13.68□□□□□ -0.22
TSPAN3-202ENST00000346495 KCNQ1DNQ9H478 68 aa13.68□□□□□ -0.22
TSPAN3-202ENST00000346495 LINC00474Q9P2X8 69 aa13.68□□□□□ -0.22
TSPAN3-202ENST00000346495 KMT2AQ03164 3969 aa13.68□□□□□ -0.22
TSPAN3-202ENST00000346495 SNCGO76070 127 aa13.68□□□□□ -0.22
TSPAN3-202ENST00000346495 LINC00167Q96N53 147 aa13.68□□□□□ -0.22
TSPAN3-202ENST00000346495 IGLV1-50A0A075B6I6 118 aa13.66□□□□□ -0.22
TSPAN3-202ENST00000346495 RTL8CO15255 209 aa13.66□□□□□ -0.22
TSPAN3-202ENST00000346495 COX7BP24311 80 aa13.66□□□□□ -0.22
TSPAN3-202ENST00000346495 LINC00575Q6W349 94 aa13.66□□□□□ -0.22
TSPAN3-202ENST00000346495 A0A1W2PNN7 141 aa13.65□□□□□ -0.22
TSPAN3-202ENST00000346495 CHTF8P0CG12 524 aa13.65□□□□□ -0.22
TSPAN3-202ENST00000346495 TEN1Q86WV5 123 aa13.65□□□□□ -0.22
TSPAN3-202ENST00000346495 PRYO14603 147 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms