RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 IGLV1-40P01703 118 aa9.62□□□□□ -0.87
TRIO-202ENST00000344204 LITAFQ99732 161 aa9.62□□□□□ -0.87
TRIO-202ENST00000344204 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
TRIO-202ENST00000344204 IGLV4-60A0A075B6I1 120 aa9.61□□□□□ -0.87
TRIO-202ENST00000344204 A8MUN3 132 aa9.61□□□□□ -0.87
TRIO-202ENST00000344204 FBXL19-AS1Q494R0 122 aa9.61□□□□□ -0.87
TRIO-202ENST00000344204 ITPR1Q14643 2758 aa9.61□□□□□ -0.87
TRIO-202ENST00000344204 LCA10Q71F78 164 aa9.6□□□□□ -0.87
TRIO-202ENST00000344204 ZNF706Q9Y5V0 76 aaPredicted RBP9.6□□□□□ -0.87
TRIO-202ENST00000344204 A0A1W2PNU3 283 aaPredicted RBP9.6□□□□□ -0.87
TRIO-202ENST00000344204 TRAV22A0A0B4J277 110 aa9.6□□□□□ -0.87
TRIO-202ENST00000344204 A0A1B0GUV1 79 aa9.6□□□□□ -0.87
TRIO-202ENST00000344204 SPINK6Q6UWN8 80 aa9.6□□□□□ -0.87
TRIO-202ENST00000344204 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
TRIO-202ENST00000344204 TP53AIP1Q9HCN2 124 aa9.59□□□□□ -0.87
TRIO-202ENST00000344204 A0A1B0GU69 56 aa9.58□□□□□ -0.88
TRIO-202ENST00000344204 C6orf223Q8N319 242 aa9.58□□□□□ -0.88
TRIO-202ENST00000344204 LINC00315P59091 139 aa9.58□□□□□ -0.88
TRIO-202ENST00000344204 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
TRIO-202ENST00000344204 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
TRIO-202ENST00000344204 C11orf72Q8NBR9 251 aa9.57□□□□□ -0.88
TRIO-202ENST00000344204 DEFB116Q30KQ4 102 aa9.57□□□□□ -0.88
TRIO-202ENST00000344204 LINC01006Q8NI28 216 aa9.57□□□□□ -0.88
TRIO-202ENST00000344204 A0A087WSZ3 146 aa9.56□□□□□ -0.88
TRIO-202ENST00000344204 ADORA2A-AS1P86434 159 aa9.56□□□□□ -0.88
TRIO-202ENST00000344204 C10orf99Q6UWK7 81 aa9.55□□□□□ -0.88
TRIO-202ENST00000344204 Q5XG85 94 aa9.55□□□□□ -0.88
TRIO-202ENST00000344204 Q6ZTC4 211 aa9.55□□□□□ -0.88
TRIO-202ENST00000344204 DNAH12Q6ZR08 3092 aa9.55□□□□□ -0.88
TRIO-202ENST00000344204 CDSNQ15517 529 aa9.54□□□□□ -0.88
TRIO-202ENST00000344204 Q9BRP9 147 aa9.54□□□□□ -0.88
TRIO-202ENST00000344204 IGLV9-49A0A0B4J1Y8 123 aa9.54□□□□□ -0.88
TRIO-202ENST00000344204 H3BS24 57 aa9.54□□□□□ -0.88
TRIO-202ENST00000344204 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
TRIO-202ENST00000344204 LOC101927531A0A1B0GV80 90 aa9.53□□□□□ -0.88
TRIO-202ENST00000344204 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
TRIO-202ENST00000344204 RBM12B-AS1Q9P1G2 102 aa9.52□□□□□ -0.88
TRIO-202ENST00000344204 ITPR3Q14573 2671 aa9.52□□□□□ -0.89
TRIO-202ENST00000344204 ACYP2P14621 99 aa9.52□□□□□ -0.89
TRIO-202ENST00000344204 CFAP46Q8IYW2 2715 aa9.52□□□□□ -0.89
TRIO-202ENST00000344204 Q6YL49 198 aa9.51□□□□□ -0.89
TRIO-202ENST00000344204 ELOF1P60002 83 aaKnown RBP9.51□□□□□ -0.89
TRIO-202ENST00000344204 BAHCC1Q9P281 2608 aa9.51□□□□□ -0.89
TRIO-202ENST00000344204 KIAA0087Q14695 138 aa9.51□□□□□ -0.89
TRIO-202ENST00000344204 FSHBP01225 129 aa9.5□□□□□ -0.89
TRIO-202ENST00000344204 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
TRIO-202ENST00000344204 C11orf45Q8TAV5 145 aa9.49□□□□□ -0.89
TRIO-202ENST00000344204 Q1T7F1 81 aa9.49□□□□□ -0.89
TRIO-202ENST00000344204 COA5Q86WW8 74 aa9.49□□□□□ -0.89
TRIO-202ENST00000344204 C11orf71Q6IPW1 123 aa9.49□□□□□ -0.89
TRIO-202ENST00000344204 TRANK1O15050 2925 aa9.48□□□□□ -0.89
TRIO-202ENST00000344204 A0A0C4DFX4 3053 aa9.48□□□□□ -0.89
TRIO-202ENST00000344204 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.47□□□□□ -0.89
TRIO-202ENST00000344204 Q8NBF4 154 aa9.47□□□□□ -0.89
TRIO-202ENST00000344204 LY6G6DO95868 133 aa9.47□□□□□ -0.89
TRIO-202ENST00000344204 LINC01600Q96MT4 127 aa9.46□□□□□ -0.89
TRIO-202ENST00000344204 Q8NA96 180 aa9.46□□□□□ -0.9
TRIO-202ENST00000344204 DEFB131BA0A096LNP1 70 aa9.45□□□□□ -0.9
TRIO-202ENST00000344204 DEFB113Q30KQ7 82 aa9.44□□□□□ -0.9
TRIO-202ENST00000344204 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
TRIO-202ENST00000344204 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
TRIO-202ENST00000344204 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
TRIO-202ENST00000344204 C18orf65Q6ZTR6 163 aa9.43□□□□□ -0.9
TRIO-202ENST00000344204 SPINK1P00995 79 aa9.41□□□□□ -0.9
TRIO-202ENST00000344204 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
TRIO-202ENST00000344204 SPINT4Q6UDR6 99 aa9.4□□□□□ -0.9
TRIO-202ENST00000344204 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.9
TRIO-202ENST00000344204 APCP25054 2843 aa9.4□□□□□ -0.91
TRIO-202ENST00000344204 OBSCN-AS1Q96MR7 158 aa9.39□□□□□ -0.91
TRIO-202ENST00000344204 CFAP54Q96N23 3096 aa9.39□□□□□ -0.91
TRIO-202ENST00000344204 DSPP15924 2871 aaKnown RBP9.39□□□□□ -0.91
TRIO-202ENST00000344204 IGLV6-57P01721 117 aa9.39□□□□□ -0.91
TRIO-202ENST00000344204 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
TRIO-202ENST00000344204 UTP20O75691 2785 aaKnown RBP9.38□□□□□ -0.91
TRIO-202ENST00000344204 STAB1Q9NY15 2570 aa9.37□□□□□ -0.91
TRIO-202ENST00000344204 TRBV7-4A0A0J9YYF1 115 aa9.37□□□□□ -0.91
TRIO-202ENST00000344204 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
TRIO-202ENST00000344204 TEX15Q9BXT5 2789 aa9.36□□□□□ -0.91
TRIO-202ENST00000344204 EP400Q96L91 3159 aa9.35□□□□□ -0.91
TRIO-202ENST00000344204 FP248Q71RG6 208 aaPredicted RBP9.35□□□□□ -0.91
TRIO-202ENST00000344204 PRLHP81277 87 aa9.34□□□□□ -0.91
TRIO-202ENST00000344204 SRCAPQ6ZRS2 3230 aa9.34□□□□□ -0.91
TRIO-202ENST00000344204 C7orf33Q8WU49 177 aa9.34□□□□□ -0.91
TRIO-202ENST00000344204 Q6ZRX8 168 aa9.34□□□□□ -0.91
TRIO-202ENST00000344204 SPANXA2-OT1Q8N9U9 137 aa9.33□□□□□ -0.92
TRIO-202ENST00000344204 CYSTM1Q9H1C7 97 aa9.33□□□□□ -0.92
TRIO-202ENST00000344204 NBEAL2Q6ZNJ1 2754 aa9.33□□□□□ -0.92
TRIO-202ENST00000344204 K7EQZ3 153 aa9.32□□□□□ -0.92
TRIO-202ENST00000344204 UQCR11O14957 56 aa9.32□□□□□ -0.92
TRIO-202ENST00000344204 IGLV8-61A0A075B6I0 122 aa9.31□□□□□ -0.92
TRIO-202ENST00000344204 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
TRIO-202ENST00000344204 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
TRIO-202ENST00000344204 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
TRIO-202ENST00000344204 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
TRIO-202ENST00000344204 FLNBO75369 2602 aaKnown RBP9.31□□□□□ -0.92
TRIO-202ENST00000344204 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
TRIO-202ENST00000344204 Q6ZRU5 148 aa9.3□□□□□ -0.92
TRIO-202ENST00000344204 MIR22HGQ0VDD5 57 aa9.3□□□□□ -0.92
TRIO-202ENST00000344204 C10orf142B7Z368 130 aa9.3□□□□□ -0.92
TRIO-202ENST00000344204 MOBPQ13875 183 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms