RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
CXCL12-201ENST00000343575 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
CXCL12-201ENST00000343575 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
CXCL12-201ENST00000343575 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
CXCL12-201ENST00000343575 IGHV3OR16-9A0A0B4J2B5 98 aa9.87□□□□□ -0.83
CXCL12-201ENST00000343575 SMIM1B2RUZ4 78 aa9.87□□□□□ -0.83
CXCL12-201ENST00000343575 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
CXCL12-201ENST00000343575 WWC2-AS2Q96NR7 200 aa9.87□□□□□ -0.83
CXCL12-201ENST00000343575 ATOX1O00244 68 aa9.87□□□□□ -0.83
CXCL12-201ENST00000343575 IGLV10-54A0A075B6I4 117 aa9.86□□□□□ -0.83
CXCL12-201ENST00000343575 A0A1B0GX51 115 aa9.86□□□□□ -0.83
CXCL12-201ENST00000343575 COX7CP15954 63 aa9.85□□□□□ -0.83
CXCL12-201ENST00000343575 SMCR5Q8TEV8 140 aa9.85□□□□□ -0.83
CXCL12-201ENST00000343575 MALP21145 153 aa9.85□□□□□ -0.83
CXCL12-201ENST00000343575 XCL1P47992 114 aa9.85□□□□□ -0.83
CXCL12-201ENST00000343575 SS18Q15532 418 aa9.85□□□□□ -0.83
CXCL12-201ENST00000343575 CHCHD10Q8WYQ3 142 aaPredicted RBP9.85□□□□□ -0.83
CXCL12-201ENST00000343575 DNAH1Q9P2D7 4330 aa9.84□□□□□ -0.83
CXCL12-201ENST00000343575 H0YGX0 51 aa9.84□□□□□ -0.83
CXCL12-201ENST00000343575 HIST1H4AP62805 103 aaKnown RBP9.84□□□□□ -0.83
CXCL12-201ENST00000343575 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
CXCL12-201ENST00000343575 SOSTDC1Q6X4U4 206 aa9.84□□□□□ -0.83
CXCL12-201ENST00000343575 CRPP02741 224 aa9.83□□□□□ -0.84
CXCL12-201ENST00000343575 CRYGAP11844 174 aa9.83□□□□□ -0.84
CXCL12-201ENST00000343575 KRTAP1-5Q9BYS1 174 aa9.83□□□□□ -0.84
CXCL12-201ENST00000343575 RPS28P62857 69 aaKnown RBP9.83□□□□□ -0.84
CXCL12-201ENST00000343575 A0A087WZ39 114 aa9.82□□□□□ -0.84
CXCL12-201ENST00000343575 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
CXCL12-201ENST00000343575 IBA57-AS1B1ANH7 110 aa9.81□□□□□ -0.84
CXCL12-201ENST00000343575 J3KT08 172 aa9.81□□□□□ -0.84
CXCL12-201ENST00000343575 DNAL4O96015 105 aa9.81□□□□□ -0.84
CXCL12-201ENST00000343575 UBE2DNLQ8IWF7 75 aa9.81□□□□□ -0.84
CXCL12-201ENST00000343575 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
CXCL12-201ENST00000343575 GAGE2AQ6NT46 116 aa9.81□□□□□ -0.84
CXCL12-201ENST00000343575 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
CXCL12-201ENST00000343575 VPS13DQ5THJ4 4388 aa9.8□□□□□ -0.84
CXCL12-201ENST00000343575 Q6JHZ5 121 aa9.8□□□□□ -0.84
CXCL12-201ENST00000343575 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
CXCL12-201ENST00000343575 FAM218AQ96MZ4 157 aa9.78□□□□□ -0.84
CXCL12-201ENST00000343575 A0A0U1RRA0 63 aa9.77□□□□□ -0.85
CXCL12-201ENST00000343575 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
CXCL12-201ENST00000343575 C2orf48Q96LS8 159 aa9.77□□□□□ -0.85
CXCL12-201ENST00000343575 Q9HAA7 133 aa9.77□□□□□ -0.85
CXCL12-201ENST00000343575 COX7B2Q8TF08 81 aa9.76□□□□□ -0.85
CXCL12-201ENST00000343575 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
CXCL12-201ENST00000343575 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
CXCL12-201ENST00000343575 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
CXCL12-201ENST00000343575 C3orf84H3BNL1 204 aa9.74□□□□□ -0.85
CXCL12-201ENST00000343575 IGKV2D-24A0A075B6R9 120 aa9.74□□□□□ -0.85
CXCL12-201ENST00000343575 TMEM258P61165 79 aa9.74□□□□□ -0.85
CXCL12-201ENST00000343575 KIAA0087Q14695 138 aa9.74□□□□□ -0.85
CXCL12-201ENST00000343575 SERP2Q8N6R1 65 aa9.74□□□□□ -0.85
CXCL12-201ENST00000343575 C1orf43Q9BWL3 253 aa9.74□□□□□ -0.85
CXCL12-201ENST00000343575 NBDYA0A0U1RRE5 68 aa9.73□□□□□ -0.85
CXCL12-201ENST00000343575 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
CXCL12-201ENST00000343575 LINC00337Q8N6G1 96 aa9.73□□□□□ -0.85
CXCL12-201ENST00000343575 KMT2AQ03164 3969 aa9.73□□□□□ -0.85
CXCL12-201ENST00000343575 ATP5EP2Q5VTU8 51 aa9.72□□□□□ -0.85
CXCL12-201ENST00000343575 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
CXCL12-201ENST00000343575 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
CXCL12-201ENST00000343575 SMIM11BQ8TCY0 68 aa9.72□□□□□ -0.85
CXCL12-201ENST00000343575 C5orf47Q569G3 176 aa9.71□□□□□ -0.85
CXCL12-201ENST00000343575 OR13C6PQ8NH95 151 aa9.71□□□□□ -0.85
CXCL12-201ENST00000343575 TOMM7Q9P0U1 55 aa9.71□□□□□ -0.85
CXCL12-201ENST00000343575 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
CXCL12-201ENST00000343575 DNAH10Q8IVF4 4471 aa9.7□□□□□ -0.86
CXCL12-201ENST00000343575 LINC00158P58513 81 aa9.7□□□□□ -0.86
CXCL12-201ENST00000343575 Q8IZM0 81 aa9.7□□□□□ -0.86
CXCL12-201ENST00000343575 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
CXCL12-201ENST00000343575 A0A087WYN8 130 aa9.68□□□□□ -0.86
CXCL12-201ENST00000343575 JMJD7-PLA2G4BH0Y9G9 81 aa9.68□□□□□ -0.86
CXCL12-201ENST00000343575 Q6ZR54 194 aa9.68□□□□□ -0.86
CXCL12-201ENST00000343575 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
CXCL12-201ENST00000343575 ORMDL1Q9P0S3 153 aa9.68□□□□□ -0.86
CXCL12-201ENST00000343575 C6orf223Q8N319 242 aa9.68□□□□□ -0.86
CXCL12-201ENST00000343575 M0R2N4 97 aa9.67□□□□□ -0.86
CXCL12-201ENST00000343575 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
CXCL12-201ENST00000343575 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
CXCL12-201ENST00000343575 hADV29S1A0JD25 119 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 LY6G6CO95867 125 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 CCKP06307 115 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
CXCL12-201ENST00000343575 RMI2Q96E14 147 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 LINC00167Q96N53 147 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 LECT2O14960 151 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
CXCL12-201ENST00000343575 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
CXCL12-201ENST00000343575 HIGD2BQ4VC39 106 aa9.65□□□□□ -0.86
CXCL12-201ENST00000343575 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
CXCL12-201ENST00000343575 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
CXCL12-201ENST00000343575 TRBV10-3A0A0K0K1G6 114 aa9.64□□□□□ -0.87
CXCL12-201ENST00000343575 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
CXCL12-201ENST00000343575 IGKV3D-7A0A0C4DH55 119 aa9.64□□□□□ -0.87
CXCL12-201ENST00000343575 ALMS1Q8TCU4 4167 aa9.63□□□□□ -0.87
CXCL12-201ENST00000343575 BCE1O60756 84 aa9.63□□□□□ -0.87
CXCL12-201ENST00000343575 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
CXCL12-201ENST00000343575 TMEM256-PLSCR3K7ERE1 68 aa9.62□□□□□ -0.87
CXCL12-201ENST00000343575 HYDINQ4G0P3 5121 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms