RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 SPCS1Q9Y6A9 102 aa13.41□□□□□ -0.26
CLDND1-201ENST00000341181 FABP2P12104 132 aa13.4□□□□□ -0.26
CLDND1-201ENST00000341181 CXCL5P42830 114 aa13.4□□□□□ -0.26
CLDND1-201ENST00000341181 PRO1854Q9UHT4 67 aa13.39□□□□□ -0.27
CLDND1-201ENST00000341181 MIR7-3HGQ8N6C7 128 aa13.39□□□□□ -0.27
CLDND1-201ENST00000341181 K7EP34 96 aa13.38□□□□□ -0.27
CLDND1-201ENST00000341181 SYCNQ0VAF6 134 aa13.38□□□□□ -0.27
CLDND1-201ENST00000341181 C14orf177Q52M58 125 aa13.38□□□□□ -0.27
CLDND1-201ENST00000341181 CARD19Q96LW7 228 aa13.37□□□□□ -0.27
CLDND1-201ENST00000341181 LINC00158P58513 81 aa13.37□□□□□ -0.27
CLDND1-201ENST00000341181 A0A0B4J2C4 111 aa13.35□□□□□ -0.27
CLDND1-201ENST00000341181 CNBPP62633 177 aaKnown RBP13.35□□□□□ -0.27
CLDND1-201ENST00000341181 LINC01620Q4KN68 170 aa13.35□□□□□ -0.27
CLDND1-201ENST00000341181 IFITM1P13164 125 aa13.35□□□□□ -0.27
CLDND1-201ENST00000341181 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.34□□□□□ -0.27
CLDND1-201ENST00000341181 LOC107984156A0A0G2JMH3 177 aa13.34□□□□□ -0.27
CLDND1-201ENST00000341181 ARL17AQ8IVW1 177 aa13.34□□□□□ -0.27
CLDND1-201ENST00000341181 ERG28Q9UKR5 140 aa13.34□□□□□ -0.27
CLDND1-201ENST00000341181 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
CLDND1-201ENST00000341181 KRTAP10-2P60368 255 aa13.32□□□□□ -0.28
CLDND1-201ENST00000341181 H3BMG7 143 aa13.32□□□□□ -0.28
CLDND1-201ENST00000341181 GTF2H5Q6ZYL4 71 aa13.31□□□□□ -0.28
CLDND1-201ENST00000341181 MTURNQ8N3F0 131 aa13.31□□□□□ -0.28
CLDND1-201ENST00000341181 F8WDY8 70 aa13.31□□□□□ -0.28
CLDND1-201ENST00000341181 Q1RN00 199 aa13.3□□□□□ -0.28
CLDND1-201ENST00000341181 Q6ZRP5 223 aa13.28□□□□□ -0.28
CLDND1-201ENST00000341181 RPL13AP40429 203 aaKnown RBP13.27□□□□□ -0.29
CLDND1-201ENST00000341181 PSMB2P49721 201 aa13.26□□□□□ -0.29
CLDND1-201ENST00000341181 LINC00336Q6ZUF6 198 aa13.26□□□□□ -0.29
CLDND1-201ENST00000341181 C9orf163Q8N9P6 203 aa13.26□□□□□ -0.29
CLDND1-201ENST00000341181 IGKV2-28A0A075B6P5 120 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 IGKV2D-28P01615 120 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 RPL18AQ02543 176 aaKnown RBP13.25□□□□□ -0.29
CLDND1-201ENST00000341181 SND1-IT1Q9HBX3 110 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 IGLV5-52A0A0A0MRZ9 124 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 NDUFC2-KCTD14E9PQ53 114 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 TRIAP1O43715 76 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 TCL1BO95988 128 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 COX17Q14061 63 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 RNF151Q2KHN1 245 aa13.25□□□□□ -0.29
CLDND1-201ENST00000341181 SCGB1C2P0DMR2 95 aa13.24□□□□□ -0.29
CLDND1-201ENST00000341181 GAGE2EQ4V326 116 aa13.24□□□□□ -0.29
CLDND1-201ENST00000341181 XAGE1AQ9HD64 81 aa13.24□□□□□ -0.29
CLDND1-201ENST00000341181 GAGE2DQ9UEU5 116 aa13.24□□□□□ -0.29
CLDND1-201ENST00000341181 LINC00337Q8N6G1 96 aa13.23□□□□□ -0.29
CLDND1-201ENST00000341181 PRR3P79522 188 aaKnown RBP13.22□□□□□ -0.29
CLDND1-201ENST00000341181 LRP1BQ9NZR2 4599 aa13.21□□□□□ -0.29
CLDND1-201ENST00000341181 TLX1NBP0CAT3 122 aa13.21□□□□□ -0.29
CLDND1-201ENST00000341181 A0A096LNI7 61 aa13.21□□□□□ -0.3
CLDND1-201ENST00000341181 A0A1B0GVY2 172 aa13.21□□□□□ -0.3
CLDND1-201ENST00000341181 Q8NDZ9 215 aa13.21□□□□□ -0.3
CLDND1-201ENST00000341181 GAGE2BQ13066 116 aa13.2□□□□□ -0.3
CLDND1-201ENST00000341181 COPS9Q8WXC6 57 aa13.2□□□□□ -0.3
CLDND1-201ENST00000341181 LOC107984640A0A0U1RRK4 108 aa13.2□□□□□ -0.3
CLDND1-201ENST00000341181 CHTF8P0CG12 524 aa13.2□□□□□ -0.3
CLDND1-201ENST00000341181 SDIM1Q6ZPB5 146 aa13.2□□□□□ -0.3
CLDND1-201ENST00000341181 DYNC1H1Q14204 4646 aaKnown RBP13.19□□□□□ -0.3
CLDND1-201ENST00000341181 IGKV2-24A0A0C4DH68 120 aa13.19□□□□□ -0.3
CLDND1-201ENST00000341181 C9orf129Q5T035 196 aaKnown RBP13.18□□□□□ -0.3
CLDND1-201ENST00000341181 PANO1I0J062 215 aa13.18□□□□□ -0.3
CLDND1-201ENST00000341181 DNAH8Q96JB1 4490 aa13.17□□□□□ -0.3
CLDND1-201ENST00000341181 PRO0461Q9UI25 63 aa13.17□□□□□ -0.3
CLDND1-201ENST00000341181 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
CLDND1-201ENST00000341181 PPDPFQ9H3Y8 114 aa13.15□□□□□ -0.3
CLDND1-201ENST00000341181 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
CLDND1-201ENST00000341181 FAM168BA1KXE4 195 aa13.14□□□□□ -0.31
CLDND1-201ENST00000341181 SMCPP49901 116 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-201ENST00000341181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-201ENST00000341181 EPPK1P58107 5090 aaKnown RBP13.12□□□□□ -0.31
CLDND1-201ENST00000341181 KRTAP10-1P60331 282 aa13.11□□□□□ -0.31
CLDND1-201ENST00000341181 TRBV20-1A0A075B6N2 111 aa13.11□□□□□ -0.31
CLDND1-201ENST00000341181 LYRM7Q5U5X0 104 aa13.11□□□□□ -0.31
CLDND1-201ENST00000341181 TRAV13-2A0A0B4J235 113 aa13.1□□□□□ -0.31
CLDND1-201ENST00000341181 KRTAP7-1Q8IUC3 87 aa13.1□□□□□ -0.31
CLDND1-201ENST00000341181 OR13C6PQ8NH95 151 aa13.1□□□□□ -0.31
CLDND1-201ENST00000341181 F8W1H4 67 aa13.1□□□□□ -0.31
CLDND1-201ENST00000341181 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
CLDND1-201ENST00000341181 NCR3O14931 201 aa13.08□□□□□ -0.31
CLDND1-201ENST00000341181 SMIM11BQ8TCY0 68 aa13.08□□□□□ -0.31
CLDND1-201ENST00000341181 ETDBQ3ZM63 59 aa13.08□□□□□ -0.32
CLDND1-201ENST00000341181 SPACA4Q8TDM5 124 aa13.08□□□□□ -0.32
CLDND1-201ENST00000341181 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
CLDND1-201ENST00000341181 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
CLDND1-201ENST00000341181 COX6CP09669 75 aa13.07□□□□□ -0.32
CLDND1-201ENST00000341181 C9JAW5 83 aa13.06□□□□□ -0.32
CLDND1-201ENST00000341181 FAM19A5Q7Z5A7 132 aaPredicted RBP13.06□□□□□ -0.32
CLDND1-201ENST00000341181 VPREB1P12018 145 aa13.05□□□□□ -0.32
CLDND1-201ENST00000341181 FAM218AQ96MZ4 157 aa13.05□□□□□ -0.32
CLDND1-201ENST00000341181 ATXN8Q156A1 80 aa13.05□□□□□ -0.32
CLDND1-201ENST00000341181 PKIGQ9Y2B9 76 aa13.04□□□□□ -0.32
CLDND1-201ENST00000341181 OCIAD2Q56VL3 154 aa13.04□□□□□ -0.32
CLDND1-201ENST00000341181 APOBP04114 4563 aaKnown RBP13.04□□□□□ -0.32
CLDND1-201ENST00000341181 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
CLDND1-201ENST00000341181 HAMPP81172 84 aa13.03□□□□□ -0.32
CLDND1-201ENST00000341181 LST1O00453 97 aa13.03□□□□□ -0.32
CLDND1-201ENST00000341181 NDUFC2O95298 119 aa13.03□□□□□ -0.32
CLDND1-201ENST00000341181 LINC00474Q9P2X8 69 aa13.02□□□□□ -0.33
CLDND1-201ENST00000341181 A0A087WYN8 130 aa13.01□□□□□ -0.33
CLDND1-201ENST00000341181 Q6ZSA8 131 aa13.01□□□□□ -0.33
CLDND1-201ENST00000341181 SLC25A20O43772 301 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms