RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 TRAV13-2A0A0B4J235 113 aa13.81□□□□□ -0.2
VRK2-201ENST00000340157 NDUFC2-KCTD14E9PQ53 114 aa13.81□□□□□ -0.2
VRK2-201ENST00000340157 NDUFC2O95298 119 aa13.81□□□□□ -0.2
VRK2-201ENST00000340157 PSMB2P49721 201 aa13.81□□□□□ -0.2
VRK2-201ENST00000340157 M0R2N4 97 aa13.8□□□□□ -0.2
VRK2-201ENST00000340157 PSCAO43653 123 aa13.8□□□□□ -0.2
VRK2-201ENST00000340157 Q6ZRP5 223 aa13.8□□□□□ -0.2
VRK2-201ENST00000340157 TCL1BO95988 128 aa13.78□□□□□ -0.2
VRK2-201ENST00000340157 H3BMG7 143 aa13.78□□□□□ -0.2
VRK2-201ENST00000340157 RNF151Q2KHN1 245 aa13.78□□□□□ -0.2
VRK2-201ENST00000340157 SCGB1C2P0DMR2 95 aa13.76□□□□□ -0.21
VRK2-201ENST00000340157 Q6ZR54 194 aa13.76□□□□□ -0.21
VRK2-201ENST00000340157 LRCOL1A6NCL2 159 aa13.76□□□□□ -0.21
VRK2-201ENST00000340157 NCR3O14931 201 aa13.76□□□□□ -0.21
VRK2-201ENST00000340157 GAGE2EQ4V326 116 aa13.76□□□□□ -0.21
VRK2-201ENST00000340157 LYRM7Q5U5X0 104 aa13.76□□□□□ -0.21
VRK2-201ENST00000340157 GAGE2DQ9UEU5 116 aa13.76□□□□□ -0.21
VRK2-201ENST00000340157 TLX1NBP0CAT3 122 aa13.75□□□□□ -0.21
VRK2-201ENST00000340157 DNAH2Q9P225 4427 aa13.73□□□□□ -0.21
VRK2-201ENST00000340157 C9orf129Q5T035 196 aaKnown RBP13.73□□□□□ -0.21
VRK2-201ENST00000340157 OR13C6PQ8NH95 151 aa13.73□□□□□ -0.21
VRK2-201ENST00000340157 SMIM11BQ8TCY0 68 aa13.73□□□□□ -0.21
VRK2-201ENST00000340157 DNAH6Q9C0G6 4158 aa13.73□□□□□ -0.21
VRK2-201ENST00000340157 RPL28P46779 137 aaKnown RBP13.72□□□□□ -0.21
VRK2-201ENST00000340157 TRBV20-1A0A075B6N2 111 aa13.72□□□□□ -0.21
VRK2-201ENST00000340157 VPREB1P12018 145 aa13.71□□□□□ -0.21
VRK2-201ENST00000340157 CNBPP62633 177 aaKnown RBP13.71□□□□□ -0.21
VRK2-201ENST00000340157 RPL18AQ02543 176 aaKnown RBP13.71□□□□□ -0.21
VRK2-201ENST00000340157 LINC00476Q8WZB0 136 aa13.71□□□□□ -0.21
VRK2-201ENST00000340157 ALMS1Q8TCU4 4167 aa13.71□□□□□ -0.22
VRK2-201ENST00000340157 LY6G6CO95867 125 aa13.7□□□□□ -0.22
VRK2-201ENST00000340157 MTURNQ8N3F0 131 aa13.7□□□□□ -0.22
VRK2-201ENST00000340157 CLEC2BQ92478 149 aa13.7□□□□□ -0.22
VRK2-201ENST00000340157 PRO0461Q9UI25 63 aa13.7□□□□□ -0.22
VRK2-201ENST00000340157 COX6CP09669 75 aa13.69□□□□□ -0.22
VRK2-201ENST00000340157 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.67□□□□□ -0.22
VRK2-201ENST00000340157 C3orf84H3BNL1 204 aa13.67□□□□□ -0.22
VRK2-201ENST00000340157 C14orf177Q52M58 125 aa13.67□□□□□ -0.22
VRK2-201ENST00000340157 TRBV10-2A0A0K0K1G8 114 aa13.67□□□□□ -0.22
VRK2-201ENST00000340157 TMEM126AQ9H061 195 aa13.67□□□□□ -0.22
VRK2-201ENST00000340157 IGLV6-57P01721 117 aa13.65□□□□□ -0.22
VRK2-201ENST00000340157 ATXN8Q156A1 80 aa13.65□□□□□ -0.22
VRK2-201ENST00000340157 LOC107984640A0A0U1RRK4 108 aa13.64□□□□□ -0.23
VRK2-201ENST00000340157 LST1O00453 97 aa13.64□□□□□ -0.23
VRK2-201ENST00000340157 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
VRK2-201ENST00000340157 S100A7L2Q5SY68 101 aa13.63□□□□□ -0.23
VRK2-201ENST00000340157 FAM218AQ96MZ4 157 aa13.63□□□□□ -0.23
VRK2-201ENST00000340157 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
VRK2-201ENST00000340157 GAGE2BQ13066 116 aa13.63□□□□□ -0.23
VRK2-201ENST00000340157 TRBV10-3A0A0K0K1G6 114 aa13.61□□□□□ -0.23
VRK2-201ENST00000340157 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
VRK2-201ENST00000340157 KRTAP7-1Q8IUC3 87 aa13.61□□□□□ -0.23
VRK2-201ENST00000340157 F8W1H4 67 aa13.61□□□□□ -0.23
VRK2-201ENST00000340157 LINC01620Q4KN68 170 aa13.61□□□□□ -0.23
VRK2-201ENST00000340157 HYDINQ4G0P3 5121 aa13.6□□□□□ -0.23
VRK2-201ENST00000340157 A0A087WTM6 91 aa13.6□□□□□ -0.23
VRK2-201ENST00000340157 Q8N814 137 aa13.6□□□□□ -0.23
VRK2-201ENST00000340157 PLA2G2DQ9UNK4 145 aa13.59□□□□□ -0.23
VRK2-201ENST00000340157 M0R378 163 aa13.59□□□□□ -0.23
VRK2-201ENST00000340157 A0A096LNI7 61 aa13.58□□□□□ -0.24
VRK2-201ENST00000340157 C9JAW5 83 aa13.58□□□□□ -0.24
VRK2-201ENST00000340157 C1orf134Q5TEV5 83 aa13.58□□□□□ -0.24
VRK2-201ENST00000340157 HECTD4Q9Y4D8 3996 aa13.57□□□□□ -0.24
VRK2-201ENST00000340157 DNAH17Q9UFH2 4485 aa13.57□□□□□ -0.24
VRK2-201ENST00000340157 FRAS1Q86XX4 4008 aa13.57□□□□□ -0.24
VRK2-201ENST00000340157 C6orf99Q4VX62 202 aa13.57□□□□□ -0.24
VRK2-201ENST00000340157 C9orf163Q8N9P6 203 aa13.57□□□□□ -0.24
VRK2-201ENST00000340157 A0A087WYN8 130 aa13.55□□□□□ -0.24
VRK2-201ENST00000340157 C16orf90A8MZG2 172 aa13.55□□□□□ -0.24
VRK2-201ENST00000340157 IGLV5-37A0A075B6J1 123 aa13.55□□□□□ -0.24
VRK2-201ENST00000340157 H0YGX0 51 aa13.55□□□□□ -0.24
VRK2-201ENST00000340157 C7orf33Q8WU49 177 aa13.54□□□□□ -0.24
VRK2-201ENST00000340157 TRAV23DV6A0A075B6W5 121 aa13.53□□□□□ -0.24
VRK2-201ENST00000340157 SLC25A20O43772 301 aa13.53□□□□□ -0.24
VRK2-201ENST00000340157 IGKV2-24A0A0C4DH68 120 aa13.53□□□□□ -0.24
VRK2-201ENST00000340157 NKAPP1Q8N9T2 125 aa13.53□□□□□ -0.24
VRK2-201ENST00000340157 TRACP01848 142 aa13.52□□□□□ -0.25
VRK2-201ENST00000340157 FAM19A5Q7Z5A7 132 aaPredicted RBP13.51□□□□□ -0.25
VRK2-201ENST00000340157 FUSP35637 526 aaKnown RBP eCLIP13.5□□□□□ -0.25
VRK2-201ENST00000340157 ETDBQ3ZM63 59 aa13.5□□□□□ -0.25
VRK2-201ENST00000340157 SDIM1Q6ZPB5 146 aa13.5□□□□□ -0.25
VRK2-201ENST00000340157 CHTF8P0CG12 524 aa13.5□□□□□ -0.25
VRK2-201ENST00000340157 C22orf24Q9Y442 160 aa13.49□□□□□ -0.25
VRK2-201ENST00000340157 ZNF73O43830 326 aaPredicted RBP13.48□□□□□ -0.25
VRK2-201ENST00000340157 LINC01600Q96MT4 127 aa13.48□□□□□ -0.25
VRK2-201ENST00000340157 A0A1W2PNN7 141 aa13.48□□□□□ -0.25
VRK2-201ENST00000340157 ANKRD29Q8N6D5 301 aa13.48□□□□□ -0.25
VRK2-201ENST00000340157 SACSQ9NZJ4 4579 aa13.46□□□□□ -0.25
VRK2-201ENST00000340157 M0QXV9 152 aa13.46□□□□□ -0.25
VRK2-201ENST00000340157 TNP2Q05952 138 aa13.46□□□□□ -0.25
VRK2-201ENST00000340157 DIRC1Q969H9 104 aa13.46□□□□□ -0.25
VRK2-201ENST00000340157 RTL8CO15255 209 aa13.46□□□□□ -0.26
VRK2-201ENST00000340157 LINC00167Q96N53 147 aa13.46□□□□□ -0.26
VRK2-201ENST00000340157 KCNQ1DNQ9H478 68 aa13.46□□□□□ -0.26
VRK2-201ENST00000340157 PANO1I0J062 215 aa13.45□□□□□ -0.26
VRK2-201ENST00000340157 RPL37AP8A6NKH3 93 aa13.44□□□□□ -0.26
VRK2-201ENST00000340157 MRPL55Q7Z7F7 128 aaKnown RBP13.44□□□□□ -0.26
VRK2-201ENST00000340157 IGLV1-50A0A075B6I6 118 aa13.44□□□□□ -0.26
VRK2-201ENST00000340157 H3BT86 120 aa13.44□□□□□ -0.26
VRK2-201ENST00000340157 LINC00575Q6W349 94 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms