RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 C19orf73Q9NVV2 129 aa11.5□□□□□ -0.57
CDC42EP4-201ENST00000335793 ANGP03950 147 aaKnown RBP11.5□□□□□ -0.57
CDC42EP4-201ENST00000335793 Q6JHZ5 121 aa11.49□□□□□ -0.57
CDC42EP4-201ENST00000335793 NDUFC2O95298 119 aa11.49□□□□□ -0.57
CDC42EP4-201ENST00000335793 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
CDC42EP4-201ENST00000335793 SERP1Q9Y6X1 66 aa11.48□□□□□ -0.57
CDC42EP4-201ENST00000335793 SMR3AQ99954 134 aa11.47□□□□□ -0.57
CDC42EP4-201ENST00000335793 F8WEM9 126 aa11.47□□□□□ -0.57
CDC42EP4-201ENST00000335793 DEFB135Q30KP9 77 aa11.47□□□□□ -0.57
CDC42EP4-201ENST00000335793 PRO0255Q9UI72 69 aa11.47□□□□□ -0.57
CDC42EP4-201ENST00000335793 LYPD5Q6UWN5 251 aa11.46□□□□□ -0.58
CDC42EP4-201ENST00000335793 H7BZZ5 65 aa11.45□□□□□ -0.58
CDC42EP4-201ENST00000335793 AKAP9Q99996 3911 aa11.45□□□□□ -0.58
CDC42EP4-201ENST00000335793 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
CDC42EP4-201ENST00000335793 C16orf95Q9H693 158 aa11.44□□□□□ -0.58
CDC42EP4-201ENST00000335793 CYSRT1A8MQ03 144 aa11.44□□□□□ -0.58
CDC42EP4-201ENST00000335793 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
CDC42EP4-201ENST00000335793 Q8N3U1 123 aa11.43□□□□□ -0.58
CDC42EP4-201ENST00000335793 ATRQ13535 2644 aa11.43□□□□□ -0.58
CDC42EP4-201ENST00000335793 SMIM26A0A096LP01 95 aa11.42□□□□□ -0.58
CDC42EP4-201ENST00000335793 DAD1P61803 113 aa11.41□□□□□ -0.58
CDC42EP4-201ENST00000335793 TRBV7-6A0A0J9YX20 115 aa11.41□□□□□ -0.58
CDC42EP4-201ENST00000335793 CHCHD10Q8WYQ3 142 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP4-201ENST00000335793 LRCOL1A6NCL2 159 aa11.4□□□□□ -0.59
CDC42EP4-201ENST00000335793 HAMPP81172 84 aa11.39□□□□□ -0.59
CDC42EP4-201ENST00000335793 RETNQ9HD89 108 aa11.39□□□□□ -0.59
CDC42EP4-201ENST00000335793 Q8IZM0 81 aa11.39□□□□□ -0.59
CDC42EP4-201ENST00000335793 REG3AQ06141 175 aa11.38□□□□□ -0.59
CDC42EP4-201ENST00000335793 CCKP06307 115 aa11.38□□□□□ -0.59
CDC42EP4-201ENST00000335793 VWFP04275 2813 aa11.36□□□□□ -0.59
CDC42EP4-201ENST00000335793 TRAV10A0A0B4J240 114 aa11.36□□□□□ -0.59
CDC42EP4-201ENST00000335793 A0A1B0GUV1 79 aa11.36□□□□□ -0.59
CDC42EP4-201ENST00000335793 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
CDC42EP4-201ENST00000335793 FAM229BQ4G0N7 80 aa11.36□□□□□ -0.59
CDC42EP4-201ENST00000335793 X6R8D5 127 aa11.36□□□□□ -0.59
CDC42EP4-201ENST00000335793 KRTAP1-1Q07627 177 aa11.36□□□□□ -0.59
CDC42EP4-201ENST00000335793 C6orf99Q4VX62 202 aa11.35□□□□□ -0.59
CDC42EP4-201ENST00000335793 CD164L2Q6UWJ8 174 aa11.35□□□□□ -0.59
CDC42EP4-201ENST00000335793 SCXQ7RTU7 201 aa11.34□□□□□ -0.59
CDC42EP4-201ENST00000335793 KLK12Q9UKR0 248 aa11.34□□□□□ -0.59
CDC42EP4-201ENST00000335793 C6orf223Q8N319 242 aa11.33□□□□□ -0.6
CDC42EP4-201ENST00000335793 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
CDC42EP4-201ENST00000335793 KRTAP10-3P60369 221 aa11.32□□□□□ -0.6
CDC42EP4-201ENST00000335793 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
CDC42EP4-201ENST00000335793 SPAG11BQ08648 103 aa11.32□□□□□ -0.6
CDC42EP4-201ENST00000335793 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
CDC42EP4-201ENST00000335793 SPATA3Q8NHX4 192 aa11.32□□□□□ -0.6
CDC42EP4-201ENST00000335793 Q8N814 137 aa11.31□□□□□ -0.6
CDC42EP4-201ENST00000335793 UBL5Q9BZL1 73 aa11.31□□□□□ -0.6
CDC42EP4-201ENST00000335793 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
CDC42EP4-201ENST00000335793 LYRM9A8MSI8 78 aa11.3□□□□□ -0.6
CDC42EP4-201ENST00000335793 TMEM256-PLSCR3K7ERE1 68 aa11.29□□□□□ -0.6
CDC42EP4-201ENST00000335793 NSD1Q96L73 2696 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP4-201ENST00000335793 APOC4P55056 127 aa11.29□□□□□ -0.6
CDC42EP4-201ENST00000335793 C9orf66Q5T8R8 295 aa11.29□□□□□ -0.6
CDC42EP4-201ENST00000335793 JMJD7-PLA2G4BH0Y9G9 81 aa11.28□□□□□ -0.6
CDC42EP4-201ENST00000335793 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
CDC42EP4-201ENST00000335793 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.6
CDC42EP4-201ENST00000335793 CELA1Q9UNI1 258 aa11.27□□□□□ -0.6
CDC42EP4-201ENST00000335793 KIAA0087Q14695 138 aa11.27□□□□□ -0.61
CDC42EP4-201ENST00000335793 TM2D3Q9BRN9 247 aa11.26□□□□□ -0.61
CDC42EP4-201ENST00000335793 PMAIP1Q13794 54 aa11.26□□□□□ -0.61
CDC42EP4-201ENST00000335793 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
CDC42EP4-201ENST00000335793 TRAV7A0A075B6U4 112 aa11.25□□□□□ -0.61
CDC42EP4-201ENST00000335793 LY6G6DO95868 133 aa11.25□□□□□ -0.61
CDC42EP4-201ENST00000335793 SPART-AS1P0CW21 52 aa11.25□□□□□ -0.61
CDC42EP4-201ENST00000335793 NANOS2P60321 138 aaKnown RBP11.25□□□□□ -0.61
CDC42EP4-201ENST00000335793 COX17Q14061 63 aa11.25□□□□□ -0.61
CDC42EP4-201ENST00000335793 INAFM1C9JVW0 142 aa11.24□□□□□ -0.61
CDC42EP4-201ENST00000335793 EPM2AB3EWF7 344 aa11.23□□□□□ -0.61
CDC42EP4-201ENST00000335793 M0R2N4 97 aa11.22□□□□□ -0.61
CDC42EP4-201ENST00000335793 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.61
CDC42EP4-201ENST00000335793 HIGD2BQ4VC39 106 aa11.21□□□□□ -0.61
CDC42EP4-201ENST00000335793 COL6A5A8TX70 2615 aa11.21□□□□□ -0.62
CDC42EP4-201ENST00000335793 Q8NDZ9 215 aa11.2□□□□□ -0.62
CDC42EP4-201ENST00000335793 Q6ZQY7 126 aa11.2□□□□□ -0.62
CDC42EP4-201ENST00000335793 OBSCN-AS1Q96MR7 158 aa11.2□□□□□ -0.62
CDC42EP4-201ENST00000335793 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
CDC42EP4-201ENST00000335793 MIFP14174 115 aa11.19□□□□□ -0.62
CDC42EP4-201ENST00000335793 KLKP1Q107X0 134 aa11.19□□□□□ -0.62
CDC42EP4-201ENST00000335793 PSPHP1O15172 72 aa11.19□□□□□ -0.62
CDC42EP4-201ENST00000335793 LELP1Q5T871 98 aa11.18□□□□□ -0.62
CDC42EP4-201ENST00000335793 LINC00575Q6W349 94 aa11.17□□□□□ -0.62
CDC42EP4-201ENST00000335793 LINC01547P58512 204 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP4-201ENST00000335793 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
CDC42EP4-201ENST00000335793 STAB1Q9NY15 2570 aa11.16□□□□□ -0.62
CDC42EP4-201ENST00000335793 TRBV10-3A0A0K0K1G6 114 aa11.15□□□□□ -0.62
CDC42EP4-201ENST00000335793 IGHV4-30-4P0DP06 118 aa11.15□□□□□ -0.62
CDC42EP4-201ENST00000335793 Q8N9L7 120 aa11.15□□□□□ -0.63
CDC42EP4-201ENST00000335793 ATP5EP2Q5VTU8 51 aa11.14□□□□□ -0.63
CDC42EP4-201ENST00000335793 Q8NAQ8 132 aa11.14□□□□□ -0.63
CDC42EP4-201ENST00000335793 ANK3Q12955 4377 aaKnown RBP11.13□□□□□ -0.63
CDC42EP4-201ENST00000335793 DIRC1Q969H9 104 aa11.13□□□□□ -0.63
CDC42EP4-201ENST00000335793 TMEM254Q8TBM7 123 aa11.11□□□□□ -0.63
CDC42EP4-201ENST00000335793 PRR4Q16378 134 aa11.1□□□□□ -0.63
CDC42EP4-201ENST00000335793 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
CDC42EP4-201ENST00000335793 WFDC10BQ8IUB3 73 aa11.1□□□□□ -0.63
CDC42EP4-201ENST00000335793 LINC00167Q96N53 147 aa11.1□□□□□ -0.63
CDC42EP4-201ENST00000335793 Q6ZVQ6 151 aa11.1□□□□□ -0.63
CDC42EP4-201ENST00000335793 ESRGQ1W209 222 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms