RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 M0R378 163 aa14.04□□□□□ -0.16
CDKN3-202ENST00000335183 ZNF22P17026 224 aaPredicted RBP14.04□□□□□ -0.16
CDKN3-202ENST00000335183 C3orf22Q8N5N4 141 aa14.04□□□□□ -0.16
CDKN3-202ENST00000335183 MUC17Q685J3 4493 aa14.04□□□□□ -0.16
CDKN3-202ENST00000335183 CBLN2Q8IUK8 224 aa14.03□□□□□ -0.16
CDKN3-202ENST00000335183 PLEKHB2Q96CS7 222 aa14.03□□□□□ -0.16
CDKN3-202ENST00000335183 TRAPPC1Q9Y5R8 145 aa14.02□□□□□ -0.17
CDKN3-202ENST00000335183 CTAG1AP78358 180 aa14.01□□□□□ -0.17
CDKN3-202ENST00000335183 COX17Q14061 63 aa14.01□□□□□ -0.17
CDKN3-202ENST00000335183 Q8NDZ9 215 aa14.01□□□□□ -0.17
CDKN3-202ENST00000335183 YPEL4Q96NS1 127 aa14.01□□□□□ -0.17
CDKN3-202ENST00000335183 HIGD2AQ9BW72 106 aa14.01□□□□□ -0.17
CDKN3-202ENST00000335183 PPDPFQ9H3Y8 114 aa14□□□□□ -0.17
CDKN3-202ENST00000335183 A0A096LNJ9 63 aa13.97□□□□□ -0.17
CDKN3-202ENST00000335183 TMEM170BQ5T4T1 132 aa13.95□□□□□ -0.18
CDKN3-202ENST00000335183 C11orf86A6NJI1 115 aa13.93□□□□□ -0.18
CDKN3-202ENST00000335183 LINC00158P58513 81 aa13.93□□□□□ -0.18
CDKN3-202ENST00000335183 SPAG11AQ6PDA7 123 aa13.93□□□□□ -0.18
CDKN3-202ENST00000335183 SFTA2Q6UW10 78 aa13.93□□□□□ -0.18
CDKN3-202ENST00000335183 C18orf32Q8TCD1 76 aa13.93□□□□□ -0.18
CDKN3-202ENST00000335183 SPRR4Q96PI1 79 aa13.93□□□□□ -0.18
CDKN3-202ENST00000335183 HBDP02042 147 aa13.92□□□□□ -0.18
CDKN3-202ENST00000335183 PMCHL1Q16048 86 aa13.92□□□□□ -0.18
CDKN3-202ENST00000335183 URB1-AS1Q96HZ7 61 aa13.92□□□□□ -0.18
CDKN3-202ENST00000335183 A0A0U1RRA0 63 aa13.91□□□□□ -0.18
CDKN3-202ENST00000335183 C4orf48Q5BLP8 95 aa13.91□□□□□ -0.18
CDKN3-202ENST00000335183 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
CDKN3-202ENST00000335183 LINC00614P0C842 121 aa13.9□□□□□ -0.18
CDKN3-202ENST00000335183 ZNF706Q9Y5V0 76 aaPredicted RBP13.88□□□□□ -0.19
CDKN3-202ENST00000335183 FP248Q71RG6 208 aaPredicted RBP13.87□□□□□ -0.19
CDKN3-202ENST00000335183 KRTAP9-6A0A140TA67 174 aa13.86□□□□□ -0.19
CDKN3-202ENST00000335183 LINC00337Q8N6G1 96 aa13.86□□□□□ -0.19
CDKN3-202ENST00000335183 DAND5Q8N907 189 aa13.86□□□□□ -0.19
CDKN3-202ENST00000335183 Q8NBF4 154 aa13.85□□□□□ -0.19
CDKN3-202ENST00000335183 CHTOPQ9Y3Y2 248 aaKnown RBP13.84□□□□□ -0.19
CDKN3-202ENST00000335183 PRYO14603 147 aa13.83□□□□□ -0.2
CDKN3-202ENST00000335183 NCR3O14931 201 aa13.81□□□□□ -0.2
CDKN3-202ENST00000335183 SMIM13P0DJ93 91 aa13.81□□□□□ -0.2
CDKN3-202ENST00000335183 BOD1L2Q8IYS8 172 aa13.81□□□□□ -0.2
CDKN3-202ENST00000335183 TMEM223A0PJW6 202 aa13.8□□□□□ -0.2
CDKN3-202ENST00000335183 SMCR5Q8TEV8 140 aa13.8□□□□□ -0.2
CDKN3-202ENST00000335183 KRTAP13-3Q3SY46 172 aa13.79□□□□□ -0.2
CDKN3-202ENST00000335183 MEIG1Q5JSS6 88 aa13.79□□□□□ -0.2
CDKN3-202ENST00000335183 CHCHD1Q96BP2 118 aaKnown RBP13.78□□□□□ -0.2
CDKN3-202ENST00000335183 ETDCA0A1B0GVM5 59 aa13.77□□□□□ -0.21
CDKN3-202ENST00000335183 TRGC2P03986 189 aa13.77□□□□□ -0.21
CDKN3-202ENST00000335183 COLCA2A8K830 154 aa13.76□□□□□ -0.21
CDKN3-202ENST00000335183 SPRR1AP35321 89 aa13.76□□□□□ -0.21
CDKN3-202ENST00000335183 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
CDKN3-202ENST00000335183 KCNQ1DNQ9H478 68 aa13.76□□□□□ -0.21
CDKN3-202ENST00000335183 TMA7Q9Y2S6 64 aaKnown RBP13.76□□□□□ -0.21
CDKN3-202ENST00000335183 SPINK1P00995 79 aa13.75□□□□□ -0.21
CDKN3-202ENST00000335183 ASB16-AS1Q495Z4 193 aa13.74□□□□□ -0.21
CDKN3-202ENST00000335183 TRBV10-3A0A0K0K1G6 114 aa13.72□□□□□ -0.21
CDKN3-202ENST00000335183 KRTAP4-16G5E9R7 235 aaPredicted RBP13.72□□□□□ -0.21
CDKN3-202ENST00000335183 GAGE2AQ6NT46 116 aa13.72□□□□□ -0.21
CDKN3-202ENST00000335183 TRAV12-1A0A0B4J245 112 aa13.71□□□□□ -0.21
CDKN3-202ENST00000335183 IFI27L1Q96BM0 104 aa13.71□□□□□ -0.21
CDKN3-202ENST00000335183 LINC01547P58512 204 aaPredicted RBP13.7□□□□□ -0.22
CDKN3-202ENST00000335183 HERV-K104P63124 156 aa13.7□□□□□ -0.22
CDKN3-202ENST00000335183 IGLV9-49A0A0B4J1Y8 123 aa13.69□□□□□ -0.22
CDKN3-202ENST00000335183 S100A12P80511 92 aa13.69□□□□□ -0.22
CDKN3-202ENST00000335183 LINC00483Q53H64 154 aa13.69□□□□□ -0.22
CDKN3-202ENST00000335183 HSBP1O75506 76 aa13.68□□□□□ -0.22
CDKN3-202ENST00000335183 MOBPQ13875 183 aa13.68□□□□□ -0.22
CDKN3-202ENST00000335183 NDUFA12Q9UI09 145 aa13.68□□□□□ -0.22
CDKN3-202ENST00000335183 LOC105371267A0A1B0GV96 52 aa13.67□□□□□ -0.22
CDKN3-202ENST00000335183 SEC61BP60468 96 aaKnown RBP13.67□□□□□ -0.22
CDKN3-202ENST00000335183 KRTAP4-1Q9BYQ7 146 aa13.67□□□□□ -0.22
CDKN3-202ENST00000335183 LINC00587B1AMM8 73 aa13.66□□□□□ -0.22
CDKN3-202ENST00000335183 MAP1LC3CQ9BXW4 147 aa13.66□□□□□ -0.22
CDKN3-202ENST00000335183 B5MCH6 92 aa13.65□□□□□ -0.22
CDKN3-202ENST00000335183 MYMXA0A1B0GTQ4 84 aa13.64□□□□□ -0.23
CDKN3-202ENST00000335183 ERC2-IT1O76042 136 aa13.64□□□□□ -0.23
CDKN3-202ENST00000335183 SERF1AO75920 110 aa13.63□□□□□ -0.23
CDKN3-202ENST00000335183 LINC00310P59036 64 aa13.63□□□□□ -0.23
CDKN3-202ENST00000335183 Q8N377 158 aa13.63□□□□□ -0.23
CDKN3-202ENST00000335183 FAM19A2Q8N3H0 131 aa13.63□□□□□ -0.23
CDKN3-202ENST00000335183 SSBP3-AS1Q7Z2R9 100 aa13.62□□□□□ -0.23
CDKN3-202ENST00000335183 DDTP30046 118 aa13.61□□□□□ -0.23
CDKN3-202ENST00000335183 H0Y8G0 127 aa13.6□□□□□ -0.23
CDKN3-202ENST00000335183 RPS29P62273 56 aaKnown RBP13.6□□□□□ -0.23
CDKN3-202ENST00000335183 Q9BRP9 147 aa13.59□□□□□ -0.23
CDKN3-202ENST00000335183 SLC25A20O43772 301 aa13.57□□□□□ -0.24
CDKN3-202ENST00000335183 LEPROTL1O95214 131 aa13.57□□□□□ -0.24
CDKN3-202ENST00000335183 TSPEAR-AS2P59090 65 aa13.57□□□□□ -0.24
CDKN3-202ENST00000335183 Q6ZRX8 168 aa13.56□□□□□ -0.24
CDKN3-202ENST00000335183 TRBV10-2A0A0K0K1G8 114 aa13.55□□□□□ -0.24
CDKN3-202ENST00000335183 LOC107984156A0A0G2JMH3 177 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BKO60814 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BJP06899 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BOP23527 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BBP33778 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BDP58876 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BCP62807 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST2H2BEQ16778 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.54□□□□□ -0.24
CDKN3-202ENST00000335183 C9orf153Q5TBE3 101 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 ARL17AQ8IVW1 177 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BHQ93079 126 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms