RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 IGKV2-24A0A0C4DH68 120 aa13.72□□□□□ -0.21
TPM1-204ENST00000334895 GCSHP23434 173 aa13.72□□□□□ -0.21
TPM1-204ENST00000334895 Q6ZVH6 145 aa13.72□□□□□ -0.21
TPM1-204ENST00000334895 HIST1H4GQ99525 98 aa13.72□□□□□ -0.21
TPM1-204ENST00000334895 MUSTN1Q8IVN3 82 aa13.72□□□□□ -0.21
TPM1-204ENST00000334895 LOC107984156A0A0G2JMH3 177 aa13.71□□□□□ -0.22
TPM1-204ENST00000334895 DDTP30046 118 aa13.71□□□□□ -0.22
TPM1-204ENST00000334895 KRTAP10-1P60331 282 aa13.71□□□□□ -0.22
TPM1-204ENST00000334895 ARL17AQ8IVW1 177 aa13.71□□□□□ -0.22
TPM1-204ENST00000334895 Q8NDZ9 215 aa13.71□□□□□ -0.22
TPM1-204ENST00000334895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.71□□□□□ -0.22
TPM1-204ENST00000334895 LRP1BQ9NZR2 4599 aa13.7□□□□□ -0.22
TPM1-204ENST00000334895 IFITM1P13164 125 aa13.69□□□□□ -0.22
TPM1-204ENST00000334895 CTAG1AP78358 180 aa13.68□□□□□ -0.22
TPM1-204ENST00000334895 HSD52Q0P140 79 aa13.68□□□□□ -0.22
TPM1-204ENST00000334895 TAL2Q16559 108 aa13.68□□□□□ -0.22
TPM1-204ENST00000334895 FAM168BA1KXE4 195 aa13.67□□□□□ -0.22
TPM1-204ENST00000334895 KRTAP7-1Q8IUC3 87 aa13.67□□□□□ -0.22
TPM1-204ENST00000334895 SPACA4Q8TDM5 124 aa13.67□□□□□ -0.22
TPM1-204ENST00000334895 LINC00474Q9P2X8 69 aa13.67□□□□□ -0.22
TPM1-204ENST00000334895 PPDPFQ9H3Y8 114 aa13.66□□□□□ -0.22
TPM1-204ENST00000334895 CEND1Q8N111 149 aa13.65□□□□□ -0.22
TPM1-204ENST00000334895 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
TPM1-204ENST00000334895 FAM30AQ9NZY2 134 aa13.64□□□□□ -0.23
TPM1-204ENST00000334895 A0A1W2PNN7 141 aa13.64□□□□□ -0.23
TPM1-204ENST00000334895 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
TPM1-204ENST00000334895 PCP4L1A6NKN8 68 aa13.63□□□□□ -0.23
TPM1-204ENST00000334895 FXYD2P54710 66 aa13.63□□□□□ -0.23
TPM1-204ENST00000334895 PLA2G2DQ9UNK4 145 aa13.63□□□□□ -0.23
TPM1-204ENST00000334895 VPREB1P12018 145 aa13.62□□□□□ -0.23
TPM1-204ENST00000334895 PRR3P79522 188 aaKnown RBP13.62□□□□□ -0.23
TPM1-204ENST00000334895 Q6ZSA8 131 aa13.62□□□□□ -0.23
TPM1-204ENST00000334895 A4D1N5 150 aa13.61□□□□□ -0.23
TPM1-204ENST00000334895 RPL24P83731 157 aaKnown RBP13.61□□□□□ -0.23
TPM1-204ENST00000334895 FAM19A5Q7Z5A7 132 aaPredicted RBP13.6□□□□□ -0.23
TPM1-204ENST00000334895 NDUFC2O95298 119 aa13.59□□□□□ -0.23
TPM1-204ENST00000334895 IGKV2-28A0A075B6P5 120 aa13.58□□□□□ -0.24
TPM1-204ENST00000334895 A0A087WYN8 130 aa13.58□□□□□ -0.24
TPM1-204ENST00000334895 IGKV2D-28P01615 120 aa13.58□□□□□ -0.24
TPM1-204ENST00000334895 HINT1P49773 126 aaPredicted RBP13.58□□□□□ -0.24
TPM1-204ENST00000334895 BVES-AS1Q5T3Y7 98 aa13.58□□□□□ -0.24
TPM1-204ENST00000334895 IGLV5-37A0A075B6J1 123 aa13.57□□□□□ -0.24
TPM1-204ENST00000334895 EPM2AB3EWF7 344 aa13.57□□□□□ -0.24
TPM1-204ENST00000334895 NCR3O14931 201 aa13.56□□□□□ -0.24
TPM1-204ENST00000334895 DPH3Q96FX2 82 aa13.56□□□□□ -0.24
TPM1-204ENST00000334895 APOBP04114 4563 aaKnown RBP13.54□□□□□ -0.24
TPM1-204ENST00000334895 PLAC8Q9NZF1 115 aa13.54□□□□□ -0.24
TPM1-204ENST00000334895 C22orf24Q9Y442 160 aa13.54□□□□□ -0.24
TPM1-204ENST00000334895 LINC00337Q8N6G1 96 aa13.53□□□□□ -0.24
TPM1-204ENST00000334895 M0R143 59 aa13.53□□□□□ -0.24
TPM1-204ENST00000334895 CFC1BP0CG36 223 aa13.53□□□□□ -0.24
TPM1-204ENST00000334895 CFC1P0CG37 223 aa13.53□□□□□ -0.24
TPM1-204ENST00000334895 M0QXV9 152 aa13.52□□□□□ -0.25
TPM1-204ENST00000334895 HAMPP81172 84 aa13.52□□□□□ -0.25
TPM1-204ENST00000334895 SCXQ7RTU7 201 aa13.52□□□□□ -0.25
TPM1-204ENST00000334895 NKAPP1Q8N9T2 125 aa13.52□□□□□ -0.25
TPM1-204ENST00000334895 CIRBP-AS1Q8TBR5 109 aa13.52□□□□□ -0.25
TPM1-204ENST00000334895 TRBV10-2A0A0K0K1G8 114 aa13.51□□□□□ -0.25
TPM1-204ENST00000334895 TMEM238LA0A1B0GVL6 79 aa13.51□□□□□ -0.25
TPM1-204ENST00000334895 A6NJY4 79 aa13.51□□□□□ -0.25
TPM1-204ENST00000334895 C7orf33Q8WU49 177 aa13.51□□□□□ -0.25
TPM1-204ENST00000334895 NHP2Q9NX24 153 aaKnown RBP13.5□□□□□ -0.25
TPM1-204ENST00000334895 KIAA1109Q2LD37 5005 aa13.5□□□□□ -0.25
TPM1-204ENST00000334895 M0R378 163 aa13.5□□□□□ -0.25
TPM1-204ENST00000334895 PHF5AQ7RTV0 110 aaKnown RBP13.5□□□□□ -0.25
TPM1-204ENST00000334895 MRPL55Q7Z7F7 128 aaKnown RBP13.5□□□□□ -0.25
TPM1-204ENST00000334895 GAGE10A6NGK3 116 aa13.49□□□□□ -0.25
TPM1-204ENST00000334895 K7ERJ3 54 aa13.49□□□□□ -0.25
TPM1-204ENST00000334895 A0A0B4J2C4 111 aa13.48□□□□□ -0.25
TPM1-204ENST00000334895 A0A1B0GWB2 263 aa13.48□□□□□ -0.25
TPM1-204ENST00000334895 BATFQ16520 125 aa13.48□□□□□ -0.25
TPM1-204ENST00000334895 LINC00167Q96N53 147 aa13.48□□□□□ -0.25
TPM1-204ENST00000334895 SNHG12Q9BXW3 62 aa13.47□□□□□ -0.25
TPM1-204ENST00000334895 TRBV10-3A0A0K0K1G6 114 aa13.46□□□□□ -0.26
TPM1-204ENST00000334895 IGLV6-57P01721 117 aa13.46□□□□□ -0.26
TPM1-204ENST00000334895 XGP55808 180 aa13.45□□□□□ -0.26
TPM1-204ENST00000334895 KRTAP11-1Q8IUC1 163 aa13.45□□□□□ -0.26
TPM1-204ENST00000334895 TRAV13-2A0A0B4J235 113 aa13.44□□□□□ -0.26
TPM1-204ENST00000334895 A6NDN8 102 aa13.44□□□□□ -0.26
TPM1-204ENST00000334895 OR13C6PQ8NH95 151 aa13.44□□□□□ -0.26
TPM1-204ENST00000334895 RPL37AP8A6NKH3 93 aa13.43□□□□□ -0.26
TPM1-204ENST00000334895 RAB37Q96AX2 223 aa13.43□□□□□ -0.26
TPM1-204ENST00000334895 IGLV1-50A0A075B6I6 118 aa13.42□□□□□ -0.26
TPM1-204ENST00000334895 LBHQ53QV2 105 aaPredicted RBP13.42□□□□□ -0.26
TPM1-204ENST00000334895 S100A7L2Q5SY68 101 aa13.42□□□□□ -0.26
TPM1-204ENST00000334895 HERC2O95714 4834 aa13.42□□□□□ -0.26
TPM1-204ENST00000334895 RPL13AP40429 203 aaKnown RBP13.42□□□□□ -0.26
TPM1-204ENST00000334895 PRO1854Q9UHT4 67 aa13.42□□□□□ -0.26
TPM1-204ENST00000334895 TMEM126AQ9H061 195 aa13.41□□□□□ -0.26
TPM1-204ENST00000334895 CDK2AP2O75956 126 aa13.4□□□□□ -0.26
TPM1-204ENST00000334895 H7C2G1 150 aa13.37□□□□□ -0.27
TPM1-204ENST00000334895 UBE2BP63146 152 aa13.37□□□□□ -0.27
TPM1-204ENST00000334895 KCNQ1DNQ9H478 68 aa13.37□□□□□ -0.27
TPM1-204ENST00000334895 HSPG2P98160 4391 aa13.36□□□□□ -0.27
TPM1-204ENST00000334895 SMIM11BQ8TCY0 68 aa13.35□□□□□ -0.27
TPM1-204ENST00000334895 CBY1Q9Y3M2 126 aa13.35□□□□□ -0.27
TPM1-204ENST00000334895 TRAV23DV6A0A075B6W5 121 aa13.35□□□□□ -0.27
TPM1-204ENST00000334895 RYR1P21817 5038 aa13.34□□□□□ -0.27
TPM1-204ENST00000334895 TSPAN13O95857 204 aa13.33□□□□□ -0.28
TPM1-204ENST00000334895 PRYO14603 147 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms