RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FAM19A1Q7Z5A9 133 aa13.51□□□□□ -0.25
CRLF3-201ENST00000324238 KLK12Q9UKR0 248 aa13.51□□□□□ -0.25
CRLF3-201ENST00000324238 MAST4O15021 2626 aa13.51□□□□□ -0.25
CRLF3-201ENST00000324238 XAGE1AQ9HD64 81 aa13.5□□□□□ -0.25
CRLF3-201ENST00000324238 M0R2N4 97 aa13.5□□□□□ -0.25
CRLF3-201ENST00000324238 CCKP06307 115 aa13.5□□□□□ -0.25
CRLF3-201ENST00000324238 TMEM126AQ9H061 195 aa13.5□□□□□ -0.25
CRLF3-201ENST00000324238 TRAV23DV6A0A075B6W5 121 aa13.48□□□□□ -0.25
CRLF3-201ENST00000324238 Q6JHZ5 121 aa13.48□□□□□ -0.25
CRLF3-201ENST00000324238 USP17L23D6RBM5 183 aa13.48□□□□□ -0.25
CRLF3-201ENST00000324238 SPAG11BQ08648 103 aa13.47□□□□□ -0.25
CRLF3-201ENST00000324238 ENHOQ6UWT2 76 aa13.47□□□□□ -0.25
CRLF3-201ENST00000324238 TENM3Q9P273 2699 aa13.47□□□□□ -0.25
CRLF3-201ENST00000324238 CYSRT1A8MQ03 144 aa13.47□□□□□ -0.25
CRLF3-201ENST00000324238 ATOX1O00244 68 aa13.47□□□□□ -0.25
CRLF3-201ENST00000324238 LAMTOR3Q9UHA4 124 aa13.44□□□□□ -0.26
CRLF3-201ENST00000324238 TMEM256-PLSCR3K7ERE1 68 aa13.43□□□□□ -0.26
CRLF3-201ENST00000324238 C9orf66Q5T8R8 295 aa13.43□□□□□ -0.26
CRLF3-201ENST00000324238 RETNQ9HD89 108 aa13.42□□□□□ -0.26
CRLF3-201ENST00000324238 LINC00575Q6W349 94 aa13.41□□□□□ -0.26
CRLF3-201ENST00000324238 LYRM9A8MSI8 78 aa13.4□□□□□ -0.26
CRLF3-201ENST00000324238 HIGD2BQ4VC39 106 aa13.4□□□□□ -0.26
CRLF3-201ENST00000324238 LINC00167Q96N53 147 aa13.4□□□□□ -0.26
CRLF3-201ENST00000324238 Q6ZQY7 126 aa13.4□□□□□ -0.26
CRLF3-201ENST00000324238 SMIM9A6NGZ8 99 aa13.39□□□□□ -0.27
CRLF3-201ENST00000324238 JMJD7-PLA2G4BH0Y9G9 81 aa13.39□□□□□ -0.27
CRLF3-201ENST00000324238 NDUFC2O95298 119 aa13.39□□□□□ -0.27
CRLF3-201ENST00000324238 OXLD1Q5BKU9 147 aa13.39□□□□□ -0.27
CRLF3-201ENST00000324238 COX17Q14061 63 aa13.38□□□□□ -0.27
CRLF3-201ENST00000324238 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
CRLF3-201ENST00000324238 SERP2Q8N6R1 65 aa13.38□□□□□ -0.27
CRLF3-201ENST00000324238 TRBV10-3A0A0K0K1G6 114 aa13.37□□□□□ -0.27
CRLF3-201ENST00000324238 CRYGAP11844 174 aa13.37□□□□□ -0.27
CRLF3-201ENST00000324238 GHRHP01286 108 aa13.36□□□□□ -0.27
CRLF3-201ENST00000324238 APOC4P55056 127 aa13.36□□□□□ -0.27
CRLF3-201ENST00000324238 Q8NAQ8 132 aa13.36□□□□□ -0.27
CRLF3-201ENST00000324238 HAMPP81172 84 aa13.36□□□□□ -0.27
CRLF3-201ENST00000324238 DSCR8Q96T75 97 aa13.36□□□□□ -0.27
CRLF3-201ENST00000324238 RBM3P98179 157 aaKnown RBP13.35□□□□□ -0.27
CRLF3-201ENST00000324238 SCXQ7RTU7 201 aa13.34□□□□□ -0.27
CRLF3-201ENST00000324238 C6orf48Q9UBA6 75 aa13.34□□□□□ -0.27
CRLF3-201ENST00000324238 NBEAL1Q6ZS30 2694 aa13.34□□□□□ -0.27
CRLF3-201ENST00000324238 ANK2Q01484 3957 aa13.33□□□□□ -0.28
CRLF3-201ENST00000324238 UBL5Q9BZL1 73 aa13.33□□□□□ -0.28
CRLF3-201ENST00000324238 SPART-AS1P0CW21 52 aa13.33□□□□□ -0.28
CRLF3-201ENST00000324238 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
CRLF3-201ENST00000324238 Q6ZQT0 140 aa13.31□□□□□ -0.28
CRLF3-201ENST00000324238 COL6A5A8TX70 2615 aa13.31□□□□□ -0.28
CRLF3-201ENST00000324238 WFDC10BQ8IUB3 73 aa13.31□□□□□ -0.28
CRLF3-201ENST00000324238 LELP1Q5T871 98 aa13.3□□□□□ -0.28
CRLF3-201ENST00000324238 BAHCC1Q9P281 2608 aa13.29□□□□□ -0.28
CRLF3-201ENST00000324238 IGLV6-57P01721 117 aa13.28□□□□□ -0.28
CRLF3-201ENST00000324238 FAM19A5Q7Z5A7 132 aaPredicted RBP13.28□□□□□ -0.28
CRLF3-201ENST00000324238 C20orf197Q8N268 126 aa13.28□□□□□ -0.28
CRLF3-201ENST00000324238 LYPD5Q6UWN5 251 aa13.27□□□□□ -0.28
CRLF3-201ENST00000324238 ZNF561-AS1K7EIQ3 104 aa13.26□□□□□ -0.29
CRLF3-201ENST00000324238 A0A0J9YWU9 116 aa13.26□□□□□ -0.29
CRLF3-201ENST00000324238 MIFP14174 115 aa13.25□□□□□ -0.29
CRLF3-201ENST00000324238 PRR34Q9NV39 138 aa13.25□□□□□ -0.29
CRLF3-201ENST00000324238 J3KT08 172 aa13.24□□□□□ -0.29
CRLF3-201ENST00000324238 OXTP01178 125 aa13.24□□□□□ -0.29
CRLF3-201ENST00000324238 TRAV10A0A0B4J240 114 aa13.24□□□□□ -0.29
CRLF3-201ENST00000324238 LINC01547P58512 204 aaPredicted RBP13.24□□□□□ -0.29
CRLF3-201ENST00000324238 Q6ZVQ6 151 aa13.24□□□□□ -0.29
CRLF3-201ENST00000324238 CAMK2N2Q96S95 79 aa13.24□□□□□ -0.29
CRLF3-201ENST00000324238 DIRC1Q969H9 104 aa13.23□□□□□ -0.29
CRLF3-201ENST00000324238 ZNF73O43830 326 aaPredicted RBP13.23□□□□□ -0.29
CRLF3-201ENST00000324238 Q6ZTC4 211 aa13.23□□□□□ -0.29
CRLF3-201ENST00000324238 DPH3Q96FX2 82 aa13.22□□□□□ -0.29
CRLF3-201ENST00000324238 Q6ZRU5 148 aa13.21□□□□□ -0.29
CRLF3-201ENST00000324238 PRB2P02812 416 aaPredicted RBP13.2□□□□□ -0.3
CRLF3-201ENST00000324238 KPRPQ5T749 579 aaPredicted RBP13.19□□□□□ -0.3
CRLF3-201ENST00000324238 MUC7Q8TAX7 377 aa13.19□□□□□ -0.3
CRLF3-201ENST00000324238 COX7BP24311 80 aa13.18□□□□□ -0.3
CRLF3-201ENST00000324238 KRTAP10-11P60412 298 aa13.18□□□□□ -0.3
CRLF3-201ENST00000324238 SNURFQ9Y675 71 aa13.18□□□□□ -0.3
CRLF3-201ENST00000324238 Q8N9L7 120 aa13.18□□□□□ -0.3
CRLF3-201ENST00000324238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.17□□□□□ -0.3
CRLF3-201ENST00000324238 ATP5EP2Q5VTU8 51 aa13.17□□□□□ -0.3
CRLF3-201ENST00000324238 LOC110117498A0A087WWA1 95 aa13.15□□□□□ -0.3
CRLF3-201ENST00000324238 TMEM258P61165 79 aa13.15□□□□□ -0.3
CRLF3-201ENST00000324238 DEFB105AQ8NG35 78 aa13.15□□□□□ -0.3
CRLF3-201ENST00000324238 MGAM2Q2M2H8 2515 aa13.15□□□□□ -0.3
CRLF3-201ENST00000324238 VPREB1P12018 145 aa13.14□□□□□ -0.31
CRLF3-201ENST00000324238 IGKV2D-24A0A075B6R9 120 aa13.12□□□□□ -0.31
CRLF3-201ENST00000324238 C15orf56Q8N910 161 aa13.12□□□□□ -0.31
CRLF3-201ENST00000324238 ESRGQ1W209 222 aa13.11□□□□□ -0.31
CRLF3-201ENST00000324238 Q6ZRP5 223 aa13.11□□□□□ -0.31
CRLF3-201ENST00000324238 GVQW2A0A096LPI5 108 aaPredicted RBP13.1□□□□□ -0.31
CRLF3-201ENST00000324238 ELOF1P60002 83 aaKnown RBP13.1□□□□□ -0.31
CRLF3-201ENST00000324238 RMI2Q96E14 147 aa13.1□□□□□ -0.31
CRLF3-201ENST00000324238 KRTAP26-1Q6PEX3 210 aa13.08□□□□□ -0.31
CRLF3-201ENST00000324238 C3orf84H3BNL1 204 aa13.08□□□□□ -0.32
CRLF3-201ENST00000324238 C4orf26Q17RF5 130 aa13.08□□□□□ -0.32
CRLF3-201ENST00000324238 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
CRLF3-201ENST00000324238 TRBV7-4A0A0J9YYF1 115 aa13.06□□□□□ -0.32
CRLF3-201ENST00000324238 RPL37AP8A6NKH3 93 aa13.05□□□□□ -0.32
CRLF3-201ENST00000324238 MRAPQ8TCY5 172 aa13.05□□□□□ -0.32
CRLF3-201ENST00000324238 CSMD3Q7Z407 3707 aa13.05□□□□□ -0.32
CRLF3-201ENST00000324238 M0R378 163 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms