RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 LOC107984156A0A0G2JMH3 177 aa17.6■□□□□ 0.41
CTDNEP1-201ENST00000318988 TMEM238LA0A1B0GVL6 79 aa17.6■□□□□ 0.41
CTDNEP1-201ENST00000318988 A6NJY4 79 aa17.6■□□□□ 0.41
CTDNEP1-201ENST00000318988 EIF4EBP3O60516 100 aaPredicted RBP17.6■□□□□ 0.41
CTDNEP1-201ENST00000318988 HINT1P49773 126 aaPredicted RBP17.6■□□□□ 0.41
CTDNEP1-201ENST00000318988 ARL17AQ8IVW1 177 aa17.6■□□□□ 0.41
CTDNEP1-201ENST00000318988 LINC00474Q9P2X8 69 aa17.59■□□□□ 0.41
CTDNEP1-201ENST00000318988 FAT2Q9NYQ8 4349 aa17.59■□□□□ 0.41
CTDNEP1-201ENST00000318988 C9orf129Q5T035 196 aaKnown RBP17.57■□□□□ 0.4
CTDNEP1-201ENST00000318988 A4D1N5 150 aa17.57■□□□□ 0.4
CTDNEP1-201ENST00000318988 FXYD2P54710 66 aa17.56■□□□□ 0.4
CTDNEP1-201ENST00000318988 BVES-AS1Q5T3Y7 98 aa17.56■□□□□ 0.4
CTDNEP1-201ENST00000318988 DPH3Q96FX2 82 aa17.55■□□□□ 0.4
CTDNEP1-201ENST00000318988 CHTF8P0CG12 524 aa17.53■□□□□ 0.4
CTDNEP1-201ENST00000318988 BATFQ16520 125 aa17.53■□□□□ 0.4
CTDNEP1-201ENST00000318988 NDUFC2O95298 119 aa17.52■□□□□ 0.4
CTDNEP1-201ENST00000318988 HECTD4Q9Y4D8 3996 aa17.52■□□□□ 0.39
CTDNEP1-201ENST00000318988 A0A1B0GVY2 172 aa17.52■□□□□ 0.39
CTDNEP1-201ENST00000318988 PLA2G2DQ9UNK4 145 aa17.49■□□□□ 0.39
CTDNEP1-201ENST00000318988 DNAH11Q96DT5 4516 aa17.49■□□□□ 0.39
CTDNEP1-201ENST00000318988 NHP2Q9NX24 153 aaKnown RBP17.48■□□□□ 0.39
CTDNEP1-201ENST00000318988 A6NDN8 102 aa17.47■□□□□ 0.39
CTDNEP1-201ENST00000318988 NKAPP1Q8N9T2 125 aa17.47■□□□□ 0.39
CTDNEP1-201ENST00000318988 VPREB1P12018 145 aa17.47■□□□□ 0.39
CTDNEP1-201ENST00000318988 FAM19A5Q7Z5A7 132 aaPredicted RBP17.47■□□□□ 0.39
CTDNEP1-201ENST00000318988 RAB37Q96AX2 223 aa17.47■□□□□ 0.39
CTDNEP1-201ENST00000318988 FAM168BA1KXE4 195 aa17.46■□□□□ 0.39
CTDNEP1-201ENST00000318988 NCR3O14931 201 aa17.46■□□□□ 0.39
CTDNEP1-201ENST00000318988 SPACA4Q8TDM5 124 aa17.46■□□□□ 0.39
CTDNEP1-201ENST00000318988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.46■□□□□ 0.39
CTDNEP1-201ENST00000318988 PRR3P79522 188 aaKnown RBP17.45■□□□□ 0.38
CTDNEP1-201ENST00000318988 SERTAD4-AS1Q5TG53 156 aa17.45■□□□□ 0.38
CTDNEP1-201ENST00000318988 Q8NDZ9 215 aa17.45■□□□□ 0.38
CTDNEP1-201ENST00000318988 CFC1BP0CG36 223 aa17.44■□□□□ 0.38
CTDNEP1-201ENST00000318988 CFC1P0CG37 223 aa17.44■□□□□ 0.38
CTDNEP1-201ENST00000318988 PKD1P98161 4303 aa17.43■□□□□ 0.38
CTDNEP1-201ENST00000318988 RYR3Q15413 4870 aa17.43■□□□□ 0.38
CTDNEP1-201ENST00000318988 PANO1I0J062 215 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 KRTAP10-1P60331 282 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 IGKV2-28A0A075B6P5 120 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 TRAV13-2A0A0B4J235 113 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 A0A0B4J2C4 111 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 TRBV10-2A0A0K0K1G8 114 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 IGKV2D-28P01615 120 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 OR13C6PQ8NH95 151 aa17.42■□□□□ 0.38
CTDNEP1-201ENST00000318988 A0A1W2PNN7 141 aa17.41■□□□□ 0.38
CTDNEP1-201ENST00000318988 M0R378 163 aa17.41■□□□□ 0.38
CTDNEP1-201ENST00000318988 SNHG12Q9BXW3 62 aa17.41■□□□□ 0.38
CTDNEP1-201ENST00000318988 IGLV5-37A0A075B6J1 123 aa17.4■□□□□ 0.38
CTDNEP1-201ENST00000318988 S100A7L2Q5SY68 101 aa17.4■□□□□ 0.38
CTDNEP1-201ENST00000318988 C22orf24Q9Y442 160 aa17.39■□□□□ 0.37
CTDNEP1-201ENST00000318988 A0A087WYN8 130 aa17.37■□□□□ 0.37
CTDNEP1-201ENST00000318988 A0A1B0GWB2 263 aa17.37■□□□□ 0.37
CTDNEP1-201ENST00000318988 K7ERJ3 54 aa17.37■□□□□ 0.37
CTDNEP1-201ENST00000318988 M0QXV9 152 aa17.37■□□□□ 0.37
CTDNEP1-201ENST00000318988 LINC00337Q8N6G1 96 aa17.37■□□□□ 0.37
CTDNEP1-201ENST00000318988 PRO1854Q9UHT4 67 aa17.37■□□□□ 0.37
CTDNEP1-201ENST00000318988 KRTAP7-1Q8IUC3 87 aa17.36■□□□□ 0.37
CTDNEP1-201ENST00000318988 LBHQ53QV2 105 aaPredicted RBP17.35■□□□□ 0.37
CTDNEP1-201ENST00000318988 MRPL55Q7Z7F7 128 aaKnown RBP17.35■□□□□ 0.37
CTDNEP1-201ENST00000318988 TMEM126AQ9H061 195 aa17.35■□□□□ 0.37
CTDNEP1-201ENST00000318988 GAGE10A6NGK3 116 aa17.34■□□□□ 0.37
CTDNEP1-201ENST00000318988 RPL13AP40429 203 aaKnown RBP17.34■□□□□ 0.37
CTDNEP1-201ENST00000318988 DNAH5Q8TE73 4624 aa17.34■□□□□ 0.37
CTDNEP1-201ENST00000318988 FAM30AQ9NZY2 134 aa17.33■□□□□ 0.37
CTDNEP1-201ENST00000318988 C7orf33Q8WU49 177 aa17.32■□□□□ 0.36
CTDNEP1-201ENST00000318988 H7C2G1 150 aa17.31■□□□□ 0.36
CTDNEP1-201ENST00000318988 Q6ZSA8 131 aa17.31■□□□□ 0.36
CTDNEP1-201ENST00000318988 PLAC8Q9NZF1 115 aa17.31■□□□□ 0.36
CTDNEP1-201ENST00000318988 COL5A1-AS1Q5SY13 56 aa17.31■□□□□ 0.36
CTDNEP1-201ENST00000318988 Q1RN00 199 aa17.3■□□□□ 0.36
CTDNEP1-201ENST00000318988 LINC00167Q96N53 147 aa17.3■□□□□ 0.36
CTDNEP1-201ENST00000318988 TRBV10-3A0A0K0K1G6 114 aa17.29■□□□□ 0.36
CTDNEP1-201ENST00000318988 CBY1Q9Y3M2 126 aa17.29■□□□□ 0.36
CTDNEP1-201ENST00000318988 IGLV6-57P01721 117 aa17.28■□□□□ 0.36
CTDNEP1-201ENST00000318988 PHF5AQ7RTV0 110 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-201ENST00000318988 RPL37AP8A6NKH3 93 aa17.26■□□□□ 0.35
CTDNEP1-201ENST00000318988 EPM2AB3EWF7 344 aa17.26■□□□□ 0.35
CTDNEP1-201ENST00000318988 UBE2BP63146 152 aa17.26■□□□□ 0.35
CTDNEP1-201ENST00000318988 SCXQ7RTU7 201 aa17.24■□□□□ 0.35
CTDNEP1-201ENST00000318988 CIRBP-AS1Q8TBR5 109 aa17.24■□□□□ 0.35
CTDNEP1-201ENST00000318988 IGLV1-50A0A075B6I6 118 aa17.22■□□□□ 0.35
CTDNEP1-201ENST00000318988 TRAV23DV6A0A075B6W5 121 aa17.21■□□□□ 0.35
CTDNEP1-201ENST00000318988 PKHD1P08F94 4074 aa17.21■□□□□ 0.35
CTDNEP1-201ENST00000318988 TSPAN13O95857 204 aa17.21■□□□□ 0.34
CTDNEP1-201ENST00000318988 SMIM11BQ8TCY0 68 aa17.2■□□□□ 0.34
CTDNEP1-201ENST00000318988 PSMB2P49721 201 aa17.19■□□□□ 0.34
CTDNEP1-201ENST00000318988 KCNQ1DNQ9H478 68 aa17.18■□□□□ 0.34
CTDNEP1-201ENST00000318988 TAX1BP3O14907 124 aa17.17■□□□□ 0.34
CTDNEP1-201ENST00000318988 HAMPP81172 84 aa17.17■□□□□ 0.34
CTDNEP1-201ENST00000318988 PRYO14603 147 aa17.16■□□□□ 0.34
CTDNEP1-201ENST00000318988 RPL28P46779 137 aaKnown RBP17.16■□□□□ 0.34
CTDNEP1-201ENST00000318988 DNAH8Q96JB1 4490 aa17.15■□□□□ 0.34
CTDNEP1-201ENST00000318988 ZNF73O43830 326 aaPredicted RBP17.14■□□□□ 0.33
CTDNEP1-201ENST00000318988 DIRC1Q969H9 104 aa17.14■□□□□ 0.33
CTDNEP1-201ENST00000318988 C9orf118A6NHY6 69 aa17.13■□□□□ 0.33
CTDNEP1-201ENST00000318988 C6orf99Q4VX62 202 aa17.12■□□□□ 0.33
CTDNEP1-201ENST00000318988 REG3GQ6UW15 175 aa17.12■□□□□ 0.33
CTDNEP1-201ENST00000318988 NAA38Q9BRA0 125 aaKnown RBP17.12■□□□□ 0.33
CTDNEP1-201ENST00000318988 H3BUT2 72 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms