RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZNF843Q8N446 348 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 C1orf195Q5TG92 126 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 POLQO75417 2590 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 BBC3Q96PG8 261 aaPredicted RBP3.24□□□□□ -1.89
PTPN13-201ENST00000316707 IGLV10-54A0A075B6I4 117 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 SERTAD4-AS1Q5TG53 156 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 C16orf95Q9H693 158 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 PRR34Q9NV39 138 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 DAD1P61803 113 aa3.24□□□□□ -1.89
PTPN13-201ENST00000316707 NDUFB1O75438 58 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 DEFB113Q30KQ7 82 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 CLPSL2Q6UWE3 100 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 LINC00528Q8N1L1 170 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 MUC3AQ02505 3323 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 MGAQ8IWI9 3026 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 OCR1Q9BZK8 76 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 ESM1Q9NQ30 184 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 DNAJC9-AS1A6NH13 148 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 C9orf116Q5BN46 136 aaPredicted RBP3.23□□□□□ -1.89
PTPN13-201ENST00000316707 CAMK2N2Q96S95 79 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 SONP18583 2426 aaKnown RBP3.23□□□□□ -1.89
PTPN13-201ENST00000316707 MAPK1IP1LQ8NDC0 245 aa3.23□□□□□ -1.89
PTPN13-201ENST00000316707 X6R8D5 127 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 FN1P02751 2386 aaKnown RBP3.22□□□□□ -1.89
PTPN13-201ENST00000316707 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 CELA1Q9UNI1 258 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 C10orf25Q5T742 122 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 ZFHX4Q86UP3 3567 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 M0R2N4 97 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 APOC4P55056 127 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 SPART-AS1P0CW21 52 aa3.22□□□□□ -1.89
PTPN13-201ENST00000316707 ABCA12Q86UK0 2595 aa3.21□□□□□ -1.89
PTPN13-201ENST00000316707 AKAP13Q12802 2813 aa3.21□□□□□ -1.89
PTPN13-201ENST00000316707 FREM2Q5SZK8 3169 aa3.21□□□□□ -1.89
PTPN13-201ENST00000316707 SCXQ7RTU7 201 aa3.21□□□□□ -1.89
PTPN13-201ENST00000316707 XAGE1AQ9HD64 81 aa3.21□□□□□ -1.89
PTPN13-201ENST00000316707 KLK12Q9UKR0 248 aa3.21□□□□□ -1.9
PTPN13-201ENST00000316707 IGLV5-48A0A075B6I7 105 aa3.21□□□□□ -1.9
PTPN13-201ENST00000316707 IGKV4-1P06312 121 aa3.21□□□□□ -1.9
PTPN13-201ENST00000316707 WFDC10AQ9H1F0 79 aa3.21□□□□□ -1.9
PTPN13-201ENST00000316707 WDFY4Q6ZS81 3184 aa3.21□□□□□ -1.9
PTPN13-201ENST00000316707 HTN3P15516 51 aa3.21□□□□□ -1.9
PTPN13-201ENST00000316707 A0A096LPF7 62 aa3.21□□□□□ -1.9
PTPN13-201ENST00000316707 MTORP42345 2549 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 SPTBN4Q9H254 2564 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 Q8NDZ9 215 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 MPLKIPQ8TAP9 179 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 C6orf48Q9UBA6 75 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 FRYLO94915 3013 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 PRB2P02812 416 aaPredicted RBP3.2□□□□□ -1.9
PTPN13-201ENST00000316707 ETDCA0A1B0GVM5 59 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 KPRPQ5T749 579 aaPredicted RBP3.2□□□□□ -1.9
PTPN13-201ENST00000316707 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 LINC00474Q9P2X8 69 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 LCE6AA0A183 80 aa3.2□□□□□ -1.9
PTPN13-201ENST00000316707 ZNF462Q96JM2 2506 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 Q6ZTC4 211 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 hDV103S1A0JD37 113 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 Q8NBF4 154 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 Q1T7F1 81 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 KCNQ1DNQ9H478 68 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 PRUNE2Q8WUY3 3088 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 H3BNG1 76 aa3.19□□□□□ -1.9
PTPN13-201ENST00000316707 ADGRG4Q8IZF6 3080 aa3.18□□□□□ -1.9
PTPN13-201ENST00000316707 H3BPC8 53 aa3.18□□□□□ -1.9
PTPN13-201ENST00000316707 SYCNQ0VAF6 134 aa3.18□□□□□ -1.9
PTPN13-201ENST00000316707 HIGD2AQ9BW72 106 aa3.18□□□□□ -1.9
PTPN13-201ENST00000316707 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
PTPN13-201ENST00000316707 TNRC18O15417 2968 aaPredicted RBP3.17□□□□□ -1.9
PTPN13-201ENST00000316707 Q6ZRU5 148 aa3.17□□□□□ -1.9
PTPN13-201ENST00000316707 PRR15Q8IV56 129 aa3.17□□□□□ -1.9
PTPN13-201ENST00000316707 C3orf84H3BNL1 204 aa3.17□□□□□ -1.9
PTPN13-201ENST00000316707 DEFB135Q30KP9 77 aa3.17□□□□□ -1.9
PTPN13-201ENST00000316707 ZCCHC13Q8WW36 166 aaKnown RBP3.17□□□□□ -1.9
PTPN13-201ENST00000316707 Q8N9L7 120 aa3.17□□□□□ -1.9
PTPN13-201ENST00000316707 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
PTPN13-201ENST00000316707 NOTCH2Q04721 2471 aa3.16□□□□□ -1.9
PTPN13-201ENST00000316707 SPRR4Q96PI1 79 aa3.16□□□□□ -1.9
PTPN13-201ENST00000316707 HRNRQ86YZ3 2850 aaPredicted RBP3.16□□□□□ -1.9
PTPN13-201ENST00000316707 PLA2G2DQ9UNK4 145 aa3.16□□□□□ -1.9
PTPN13-201ENST00000316707 Q6ZRX8 168 aa3.15□□□□□ -1.9
PTPN13-201ENST00000316707 SMIM29Q86T20 159 aa3.15□□□□□ -1.9
PTPN13-201ENST00000316707 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.9
PTPN13-201ENST00000316707 C7orf33Q8WU49 177 aa3.15□□□□□ -1.9
PTPN13-201ENST00000316707 ANKRD17O75179 2603 aaKnown RBP3.15□□□□□ -1.9
PTPN13-201ENST00000316707 TACC2O95359 2948 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 ZZEF1O43149 2961 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 RPL37AP8A6NKH3 93 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 HCG22E2RYF7 251 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 A0A1W2PNM2 257 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 TNP2Q05952 138 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 ASPMQ8IZT6 3477 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 LIMD2Q9BT23 127 aa3.15□□□□□ -1.91
PTPN13-201ENST00000316707 Q8N377 158 aa3.14□□□□□ -1.91
PTPN13-201ENST00000316707 Q8NAQ8 132 aa3.14□□□□□ -1.91
PTPN13-201ENST00000316707 CFAP46Q8IYW2 2715 aa3.14□□□□□ -1.91
PTPN13-201ENST00000316707 SPANXA2-OT1Q8N9U9 137 aa3.14□□□□□ -1.91
PTPN13-201ENST00000316707 TLX1NBP0CAT3 122 aa3.14□□□□□ -1.91
PTPN13-201ENST00000316707 IGLV5-37A0A075B6J1 123 aa3.14□□□□□ -1.91
PTPN13-201ENST00000316707 C1orf64Q8NEQ6 169 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms