RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 F8P00451 2351 aa5.35□□□□□ -1.55
SF3B3-201ENST00000302516 H3BNG1 76 aa5.35□□□□□ -1.55
SF3B3-201ENST00000302516 EDN2P20800 178 aa5.35□□□□□ -1.55
SF3B3-201ENST00000302516 SMCPP49901 116 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-201ENST00000302516 SPAG11AQ6PDA7 123 aa5.34□□□□□ -1.55
SF3B3-201ENST00000302516 LINC01556Q5JQF7 62 aa5.34□□□□□ -1.55
SF3B3-201ENST00000302516 VPREB1P12018 145 aa5.34□□□□□ -1.55
SF3B3-201ENST00000302516 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
SF3B3-201ENST00000302516 C6orf48Q9UBA6 75 aa5.33□□□□□ -1.56
SF3B3-201ENST00000302516 AVPP01185 164 aa5.33□□□□□ -1.56
SF3B3-201ENST00000302516 M0R2N4 97 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 LY6G6CO95867 125 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 Q6ZRU5 148 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 Q6ZRX8 168 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 C8orf87E5RJ46 101 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 KIAA0087Q14695 138 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 MOBPQ13875 183 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 TRAV22A0A0B4J277 110 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 LINC00315P59091 139 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 Q8NBF4 154 aa5.32□□□□□ -1.56
SF3B3-201ENST00000302516 USP9YO00507 2555 aaPredicted RBP5.31□□□□□ -1.56
SF3B3-201ENST00000302516 NHLRC4P0CG21 123 aaPredicted RBP5.31□□□□□ -1.56
SF3B3-201ENST00000302516 C22orf24Q9Y442 160 aa5.31□□□□□ -1.56
SF3B3-201ENST00000302516 A8MTW9 85 aa5.31□□□□□ -1.56
SF3B3-201ENST00000302516 C4orf26Q17RF5 130 aa5.31□□□□□ -1.56
SF3B3-201ENST00000302516 PRLHP81277 87 aa5.3□□□□□ -1.56
SF3B3-201ENST00000302516 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
SF3B3-201ENST00000302516 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
SF3B3-201ENST00000302516 GVQW2A0A096LPI5 108 aaPredicted RBP5.3□□□□□ -1.56
SF3B3-201ENST00000302516 PLA2G2AP14555 144 aa5.29□□□□□ -1.56
SF3B3-201ENST00000302516 FHL3Q13643 280 aa5.29□□□□□ -1.56
SF3B3-201ENST00000302516 TRBV7-4A0A0J9YYF1 115 aa5.29□□□□□ -1.56
SF3B3-201ENST00000302516 X6R8D5 127 aa5.29□□□□□ -1.56
SF3B3-201ENST00000302516 SMCR5Q8TEV8 140 aa5.29□□□□□ -1.56
SF3B3-201ENST00000302516 C1orf134Q5TEV5 83 aa5.29□□□□□ -1.56
SF3B3-201ENST00000302516 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
SF3B3-201ENST00000302516 SPINK1P00995 79 aa5.28□□□□□ -1.56
SF3B3-201ENST00000302516 CDSNQ15517 529 aa5.28□□□□□ -1.56
SF3B3-201ENST00000302516 KLK9Q2XQG4 91 aa5.28□□□□□ -1.56
SF3B3-201ENST00000302516 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
SF3B3-201ENST00000302516 DEFB116Q30KQ4 102 aa5.27□□□□□ -1.57
SF3B3-201ENST00000302516 IGKV2D-30A0A075B6S6 120 aa5.27□□□□□ -1.57
SF3B3-201ENST00000302516 IGKV2-30P06310 120 aa5.27□□□□□ -1.57
SF3B3-201ENST00000302516 OXLD1Q5BKU9 147 aa5.27□□□□□ -1.57
SF3B3-201ENST00000302516 FSHBP01225 129 aa5.26□□□□□ -1.57
SF3B3-201ENST00000302516 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
SF3B3-201ENST00000302516 LINC00167Q96N53 147 aa5.25□□□□□ -1.57
SF3B3-201ENST00000302516 C16orf90A8MZG2 172 aa5.25□□□□□ -1.57
SF3B3-201ENST00000302516 LITAFQ99732 161 aa5.25□□□□□ -1.57
SF3B3-201ENST00000302516 TM2D3Q9BRN9 247 aa5.25□□□□□ -1.57
SF3B3-201ENST00000302516 A8MWP4 228 aa5.25□□□□□ -1.57
SF3B3-201ENST00000302516 KLKP1Q107X0 134 aa5.25□□□□□ -1.57
SF3B3-201ENST00000302516 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
SF3B3-201ENST00000302516 ACANP16112 2415 aa5.24□□□□□ -1.57
SF3B3-201ENST00000302516 ATP11AUNQ6ZP68 121 aa5.24□□□□□ -1.57
SF3B3-201ENST00000302516 Q9UF83 564 aa5.23□□□□□ -1.57
SF3B3-201ENST00000302516 ATRQ13535 2644 aa5.22□□□□□ -1.57
SF3B3-201ENST00000302516 LINC00313P59037 77 aa5.22□□□□□ -1.57
SF3B3-201ENST00000302516 FAM229AH3BQW9 127 aa5.22□□□□□ -1.57
SF3B3-201ENST00000302516 EPM2AB3EWF7 344 aa5.21□□□□□ -1.58
SF3B3-201ENST00000302516 A0A1W2PPR1 153 aa5.2□□□□□ -1.58
SF3B3-201ENST00000302516 USP24Q9UPU5 2620 aa5.2□□□□□ -1.58
SF3B3-201ENST00000302516 Q6ZRP5 223 aa5.19□□□□□ -1.58
SF3B3-201ENST00000302516 COA5Q86WW8 74 aa5.19□□□□□ -1.58
SF3B3-201ENST00000302516 KCNQ1DNQ9H478 68 aa5.19□□□□□ -1.58
SF3B3-201ENST00000302516 RPL37AP61513 92 aaKnown RBP5.19□□□□□ -1.58
SF3B3-201ENST00000302516 DNAH10OSP0CZ25 163 aa5.18□□□□□ -1.58
SF3B3-201ENST00000302516 NOTCH1P46531 2555 aa5.18□□□□□ -1.58
SF3B3-201ENST00000302516 UQCR11O14957 56 aa5.18□□□□□ -1.58
SF3B3-201ENST00000302516 CD164Q04900 197 aa5.18□□□□□ -1.58
SF3B3-201ENST00000302516 HECTD1Q9ULT8 2610 aa5.17□□□□□ -1.58
SF3B3-201ENST00000302516 MDFIQ99750 246 aa5.17□□□□□ -1.58
SF3B3-201ENST00000302516 SPANXA2-OT1Q8N9U9 137 aa5.16□□□□□ -1.58
SF3B3-201ENST00000302516 CR1P17927 2039 aa5.16□□□□□ -1.58
SF3B3-201ENST00000302516 SPACA4Q8TDM5 124 aa5.16□□□□□ -1.58
SF3B3-201ENST00000302516 KRTAP10-9P60411 292 aa5.16□□□□□ -1.58
SF3B3-201ENST00000302516 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
SF3B3-201ENST00000302516 Q8NAQ8 132 aa5.16□□□□□ -1.58
SF3B3-201ENST00000302516 SMR3AQ99954 134 aa5.16□□□□□ -1.58
SF3B3-201ENST00000302516 K7EQZ3 153 aa5.15□□□□□ -1.59
SF3B3-201ENST00000302516 PRR15Q8IV56 129 aa5.15□□□□□ -1.59
SF3B3-201ENST00000302516 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.59
SF3B3-201ENST00000302516 SPINT4Q6UDR6 99 aa5.15□□□□□ -1.59
SF3B3-201ENST00000302516 ST20-AS1Q8NBB2 130 aa5.14□□□□□ -1.59
SF3B3-201ENST00000302516 LINC00528Q8N1L1 170 aa5.14□□□□□ -1.59
SF3B3-201ENST00000302516 PLA2G2DQ9UNK4 145 aa5.14□□□□□ -1.59
SF3B3-201ENST00000302516 LINC01600Q96MT4 127 aa5.14□□□□□ -1.59
SF3B3-201ENST00000302516 RTL8CO15255 209 aa5.13□□□□□ -1.59
SF3B3-201ENST00000302516 H7BZZ5 65 aa5.13□□□□□ -1.59
SF3B3-201ENST00000302516 NBDYA0A0U1RRE5 68 aa5.13□□□□□ -1.59
SF3B3-201ENST00000302516 SETXQ7Z333 2677 aaKnown RBP5.13□□□□□ -1.59
SF3B3-201ENST00000302516 IGLV1-50A0A075B6I6 118 aa5.12□□□□□ -1.59
SF3B3-201ENST00000302516 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
SF3B3-201ENST00000302516 TYMSOSQ8TAI1 123 aa5.12□□□□□ -1.59
SF3B3-201ENST00000302516 HELZ2Q9BYK8 2649 aaKnown RBP5.12□□□□□ -1.59
SF3B3-201ENST00000302516 PHF5AQ7RTV0 110 aaKnown RBP5.11□□□□□ -1.59
SF3B3-201ENST00000302516 CENPEQ02224 2701 aa5.11□□□□□ -1.59
SF3B3-201ENST00000302516 PRRC2CQ9Y520 2896 aaKnown RBP5.11□□□□□ -1.59
SF3B3-201ENST00000302516 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms