RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 TMEM238C9JI98 176 aa11.36□□□□□ -0.59
TMED3-201ENST00000299705 DAND5Q8N907 189 aa11.36□□□□□ -0.59
TMED3-201ENST00000299705 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
TMED3-201ENST00000299705 HAMPP81172 84 aa11.34□□□□□ -0.59
TMED3-201ENST00000299705 SLC25A34Q6PIV7 304 aa11.34□□□□□ -0.59
TMED3-201ENST00000299705 Q6ZVH6 145 aa11.34□□□□□ -0.59
TMED3-201ENST00000299705 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
TMED3-201ENST00000299705 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
TMED3-201ENST00000299705 SPANXCQ9NY87 97 aa11.34□□□□□ -0.59
TMED3-201ENST00000299705 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
TMED3-201ENST00000299705 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
TMED3-201ENST00000299705 FAM19A5Q7Z5A7 132 aaPredicted RBP11.32□□□□□ -0.6
TMED3-201ENST00000299705 RPL24P83731 157 aaKnown RBP11.32□□□□□ -0.6
TMED3-201ENST00000299705 MIEN1Q9BRT3 115 aa11.32□□□□□ -0.6
TMED3-201ENST00000299705 TP73-AS1Q9UF72 201 aa11.32□□□□□ -0.6
TMED3-201ENST00000299705 VPREB1P12018 145 aa11.31□□□□□ -0.6
TMED3-201ENST00000299705 LINC00308Q8TCZ7 52 aa11.31□□□□□ -0.6
TMED3-201ENST00000299705 PPDPFQ9H3Y8 114 aa11.31□□□□□ -0.6
TMED3-201ENST00000299705 SPANXB1Q9NS25 103 aaPredicted RBP11.31□□□□□ -0.6
TMED3-201ENST00000299705 APOBP04114 4563 aaKnown RBP11.3□□□□□ -0.6
TMED3-201ENST00000299705 IFITM1P13164 125 aa11.3□□□□□ -0.6
TMED3-201ENST00000299705 SOSTDC1Q6X4U4 206 aa11.3□□□□□ -0.6
TMED3-201ENST00000299705 C22orf24Q9Y442 160 aa11.3□□□□□ -0.6
TMED3-201ENST00000299705 M0QXV9 152 aa11.29□□□□□ -0.6
TMED3-201ENST00000299705 COPS9Q8WXC6 57 aa11.29□□□□□ -0.6
TMED3-201ENST00000299705 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
TMED3-201ENST00000299705 NPC2P61916 151 aa11.28□□□□□ -0.6
TMED3-201ENST00000299705 Q8NDZ9 215 aa11.28□□□□□ -0.6
TMED3-201ENST00000299705 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.6
TMED3-201ENST00000299705 NDUFC2O95298 119 aa11.27□□□□□ -0.6
TMED3-201ENST00000299705 SRSF9Q13242 221 aaKnown RBP eCLIP11.27□□□□□ -0.6
TMED3-201ENST00000299705 NKAPP1Q8N9T2 125 aa11.27□□□□□ -0.6
TMED3-201ENST00000299705 LBHQ53QV2 105 aaPredicted RBP11.26□□□□□ -0.61
TMED3-201ENST00000299705 C2orf91Q6ZV80 131 aa11.26□□□□□ -0.61
TMED3-201ENST00000299705 PHF5AQ7RTV0 110 aaKnown RBP11.26□□□□□ -0.61
TMED3-201ENST00000299705 MRPL55Q7Z7F7 128 aaKnown RBP11.26□□□□□ -0.61
TMED3-201ENST00000299705 C12orf57Q99622 126 aa11.25□□□□□ -0.61
TMED3-201ENST00000299705 UQCR10Q9UDW1 63 aa11.25□□□□□ -0.61
TMED3-201ENST00000299705 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
TMED3-201ENST00000299705 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
TMED3-201ENST00000299705 KIAA1109Q2LD37 5005 aa11.24□□□□□ -0.61
TMED3-201ENST00000299705 TRBV10-2A0A0K0K1G8 114 aa11.23□□□□□ -0.61
TMED3-201ENST00000299705 M0R378 163 aa11.23□□□□□ -0.61
TMED3-201ENST00000299705 SMR3BP02814 79 aaPredicted RBP11.23□□□□□ -0.61
TMED3-201ENST00000299705 LINC00518Q8N0U6 118 aa11.23□□□□□ -0.61
TMED3-201ENST00000299705 HIST1H4GQ99525 98 aa11.23□□□□□ -0.61
TMED3-201ENST00000299705 PRR3P79522 188 aaKnown RBP11.22□□□□□ -0.61
TMED3-201ENST00000299705 LINC00167Q96N53 147 aa11.22□□□□□ -0.61
TMED3-201ENST00000299705 RYR1P21817 5038 aa11.22□□□□□ -0.61
TMED3-201ENST00000299705 LINC00528Q8N1L1 170 aa11.21□□□□□ -0.61
TMED3-201ENST00000299705 TAL2Q16559 108 aa11.2□□□□□ -0.62
TMED3-201ENST00000299705 HERC2O95714 4834 aa11.19□□□□□ -0.62
TMED3-201ENST00000299705 NCR3O14931 201 aa11.19□□□□□ -0.62
TMED3-201ENST00000299705 UBE2BP63146 152 aa11.19□□□□□ -0.62
TMED3-201ENST00000299705 PRO1933Q9H354 126 aa11.19□□□□□ -0.62
TMED3-201ENST00000299705 GAGE10A6NGK3 116 aa11.19□□□□□ -0.62
TMED3-201ENST00000299705 IGLV1-50A0A075B6I6 118 aa11.18□□□□□ -0.62
TMED3-201ENST00000299705 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
TMED3-201ENST00000299705 CTAG1AP78358 180 aa11.18□□□□□ -0.62
TMED3-201ENST00000299705 Q8N1X5 172 aa11.18□□□□□ -0.62
TMED3-201ENST00000299705 HSPG2P98160 4391 aa11.17□□□□□ -0.62
TMED3-201ENST00000299705 IGKV2-28A0A075B6P5 120 aa11.17□□□□□ -0.62
TMED3-201ENST00000299705 RPL37AP8A6NKH3 93 aa11.17□□□□□ -0.62
TMED3-201ENST00000299705 IGKV2D-28P01615 120 aa11.17□□□□□ -0.62
TMED3-201ENST00000299705 KRTAP11-1Q8IUC1 163 aa11.17□□□□□ -0.62
TMED3-201ENST00000299705 TSTD3H0UI37 97 aa11.15□□□□□ -0.62
TMED3-201ENST00000299705 HNRNPA3P51991 378 aaKnown RBP11.15□□□□□ -0.62
TMED3-201ENST00000299705 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
TMED3-201ENST00000299705 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
TMED3-201ENST00000299705 A4D1N5 150 aa11.14□□□□□ -0.63
TMED3-201ENST00000299705 CEND1Q8N111 149 aa11.14□□□□□ -0.63
TMED3-201ENST00000299705 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
TMED3-201ENST00000299705 IGLV6-57P01721 117 aa11.13□□□□□ -0.63
TMED3-201ENST00000299705 PLA2G1BP04054 148 aaKnown RBP11.13□□□□□ -0.63
TMED3-201ENST00000299705 DDTP30046 118 aa11.13□□□□□ -0.63
TMED3-201ENST00000299705 HSD52Q0P140 79 aa11.13□□□□□ -0.63
TMED3-201ENST00000299705 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
TMED3-201ENST00000299705 Q5VSD8 79 aa11.13□□□□□ -0.63
TMED3-201ENST00000299705 KRTAP17-1Q9BYP8 105 aa11.13□□□□□ -0.63
TMED3-201ENST00000299705 LINC00337Q8N6G1 96 aa11.12□□□□□ -0.63
TMED3-201ENST00000299705 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
TMED3-201ENST00000299705 KCNQ1DNQ9H478 68 aa11.12□□□□□ -0.63
TMED3-201ENST00000299705 KRTAP10-4P60372 401 aaPredicted RBP11.11□□□□□ -0.63
TMED3-201ENST00000299705 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
TMED3-201ENST00000299705 PRYO14603 147 aa11.1□□□□□ -0.63
TMED3-201ENST00000299705 OR13C6PQ8NH95 151 aa11.1□□□□□ -0.63
TMED3-201ENST00000299705 CBY1Q9Y3M2 126 aa11.1□□□□□ -0.63
TMED3-201ENST00000299705 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
TMED3-201ENST00000299705 REG3GQ6UW15 175 aa11.09□□□□□ -0.63
TMED3-201ENST00000299705 TMEM238LA0A1B0GVL6 79 aa11.08□□□□□ -0.64
TMED3-201ENST00000299705 A6NJY4 79 aa11.08□□□□□ -0.64
TMED3-201ENST00000299705 FAT1Q14517 4588 aa11.06□□□□□ -0.64
TMED3-201ENST00000299705 A6NDN8 102 aa11.06□□□□□ -0.64
TMED3-201ENST00000299705 BCE1O60756 84 aa11.06□□□□□ -0.64
TMED3-201ENST00000299705 SPRR1AP35321 89 aa11.06□□□□□ -0.64
TMED3-201ENST00000299705 FXYD2P54710 66 aa11.06□□□□□ -0.64
TMED3-201ENST00000299705 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
TMED3-201ENST00000299705 A0A0B4J2C4 111 aa11.05□□□□□ -0.64
TMED3-201ENST00000299705 IGLV7-43P04211 117 aa11.05□□□□□ -0.64
TMED3-201ENST00000299705 CFC1BP0CG36 223 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms